Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae

<i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. c...
Ausführliche Beschreibung

<i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. The complete <i<O. corniculata</i< genome sequenced in the present study is a valuable resource for investigating the population and evolutionary genetics of family Oxalidaceae and can be used to identify related species. Ausführliche Beschreibung