Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses

<i<SPX</i< genes play important roles in the coordinated utilization of nitrogen (N) and phosphorus (P) in plants. However, a genome-wide analysis of the <i<SPX</i< family is still lacking. In this study, the gene structure and phylogenetic relationship of 160 <i<SPX<...
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Autor*in:	Jingjing Yang [verfasserIn] Xuyao Zhao [verfasserIn] Yan Chen [verfasserIn] Gaojie Li [verfasserIn] Xiaozhe Li [verfasserIn] Manli Xia [verfasserIn] Zuoliang Sun [verfasserIn] Yimeng Chen [verfasserIn] Yixian Li [verfasserIn] Lunguang Yao [verfasserIn] Hongwei Hou [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2022

Schlagwörter:	SPX phosphorus stress nitrogen stress gene structure gene expression profiling

Übergeordnetes Werk:	In: Cells - MDPI AG, 2012, 11(2022), 7, p 1167
Übergeordnetes Werk:	volume:11 ; year:2022 ; number:7, p 1167

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3390/cells11071167

Katalog-ID:	DOAJ000886564

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allfields	10.3390/cells11071167 doi (DE-627)DOAJ000886564 (DE-599)DOAJ244b9b2d5edb409bb27d47fc599d8b85 DE-627 ger DE-627 rakwb eng QH573-671 Jingjing Yang verfasserin aut Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<SPX</i< genes play important roles in the coordinated utilization of nitrogen (N) and phosphorus (P) in plants. However, a genome-wide analysis of the <i<SPX</i< family is still lacking. In this study, the gene structure and phylogenetic relationship of 160 <i<SPX</i< genes were systematically analyzed at the genome-wide level. Results revealed that <i<SPX</i< genes were highly conserved in plants. All <i<SPX</i< genes contained the conserved SPX domain containing motifs 2, 3, 4, and 8. The 160 <i<SPX</i< genes were divided into five clades and the <i<SPX</i< genes within the same clade shared a similar motif composition. P1BS <i<cis</i<–elements showed a high frequency in the promoter region of <i<SPX</i<s, indicating that <i<SPX</i< genes could interact with the P signal center regulatory gene <i<Phosphate Starvation Response1</i< (<i<PHR1</i<) in response to low P stress. Other <i<cis</i<–elements were also involved in plant development and biotic/abiotic stress, suggesting the functional diversity of <i<SPX</i<s. Further studies were conducted on the interaction network of three <i<SpSPXs</i<, revealing that these genes could interact with important components of the P signaling network. The expression profiles showed that <i<SpSPX</i<s responded sensitively to N and P deficiency stresses, thus playing a key regulatory function in P and N metabolism. Furthermore, the expression of <i<SpSPXs</i< under P and N deficiency stresses could be affected by environmental factors such as ABA treatment, osmotic, and LT stresses. Our study suggested that <i<SpSPXs</i< could be good candidates for enhancing the uptake ability of <i<Spirodela polyrhiza</i< for P nutrients in wastewater. These findings could broaden the understanding of the evolution and biological function of the <i<SPX</i< family and offer a foundation to further investigate this family in plants. SPX <i<Spirodela polyrhiza</i< phosphorus stress nitrogen stress gene structure gene expression profiling Cytology Xuyao Zhao verfasserin aut Yan Chen verfasserin aut Gaojie Li verfasserin aut Xiaozhe Li verfasserin aut Manli Xia verfasserin aut Zuoliang Sun verfasserin aut Yimeng Chen verfasserin aut Yixian Li verfasserin aut Lunguang Yao verfasserin aut Hongwei Hou verfasserin aut In Cells MDPI AG, 2012 11(2022), 7, p 1167 (DE-627)718622081 (DE-600)2661518-6 20734409 nnns volume:11 year:2022 number:7, p 1167 https://doi.org/10.3390/cells11071167 kostenfrei https://doaj.org/article/244b9b2d5edb409bb27d47fc599d8b85 kostenfrei https://www.mdpi.com/2073-4409/11/7/1167 kostenfrei https://doaj.org/toc/2073-4409 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 11 2022 7, p 1167
spelling	10.3390/cells11071167 doi (DE-627)DOAJ000886564 (DE-599)DOAJ244b9b2d5edb409bb27d47fc599d8b85 DE-627 ger DE-627 rakwb eng QH573-671 Jingjing Yang verfasserin aut Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<SPX</i< genes play important roles in the coordinated utilization of nitrogen (N) and phosphorus (P) in plants. However, a genome-wide analysis of the <i<SPX</i< family is still lacking. In this study, the gene structure and phylogenetic relationship of 160 <i<SPX</i< genes were systematically analyzed at the genome-wide level. Results revealed that <i<SPX</i< genes were highly conserved in plants. All <i<SPX</i< genes contained the conserved SPX domain containing motifs 2, 3, 4, and 8. The 160 <i<SPX</i< genes were divided into five clades and the <i<SPX</i< genes within the same clade shared a similar motif composition. P1BS <i<cis</i<–elements showed a high frequency in the promoter region of <i<SPX</i<s, indicating that <i<SPX</i< genes could interact with the P signal center regulatory gene <i<Phosphate Starvation Response1</i< (<i<PHR1</i<) in response to low P stress. Other <i<cis</i<–elements were also involved in plant development and biotic/abiotic stress, suggesting the functional diversity of <i<SPX</i<s. Further studies were conducted on the interaction network of three <i<SpSPXs</i<, revealing that these genes could interact with important components of the P signaling network. The expression profiles showed that <i<SpSPX</i<s responded sensitively to N and P deficiency stresses, thus playing a key regulatory function in P and N metabolism. Furthermore, the expression of <i<SpSPXs</i< under P and N deficiency stresses could be affected by environmental factors such as ABA treatment, osmotic, and LT stresses. Our study suggested that <i<SpSPXs</i< could be good candidates for enhancing the uptake ability of <i<Spirodela polyrhiza</i< for P nutrients in wastewater. These findings could broaden the understanding of the evolution and biological function of the <i<SPX</i< family and offer a foundation to further investigate this family in plants. SPX <i<Spirodela polyrhiza</i< phosphorus stress nitrogen stress gene structure gene expression profiling Cytology Xuyao Zhao verfasserin aut Yan Chen verfasserin aut Gaojie Li verfasserin aut Xiaozhe Li verfasserin aut Manli Xia verfasserin aut Zuoliang Sun verfasserin aut Yimeng Chen verfasserin aut Yixian Li verfasserin aut Lunguang Yao verfasserin aut Hongwei Hou verfasserin aut In Cells MDPI AG, 2012 11(2022), 7, p 1167 (DE-627)718622081 (DE-600)2661518-6 20734409 nnns volume:11 year:2022 number:7, p 1167 https://doi.org/10.3390/cells11071167 kostenfrei https://doaj.org/article/244b9b2d5edb409bb27d47fc599d8b85 kostenfrei https://www.mdpi.com/2073-4409/11/7/1167 kostenfrei https://doaj.org/toc/2073-4409 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 11 2022 7, p 1167
allfields_unstemmed	10.3390/cells11071167 doi (DE-627)DOAJ000886564 (DE-599)DOAJ244b9b2d5edb409bb27d47fc599d8b85 DE-627 ger DE-627 rakwb eng QH573-671 Jingjing Yang verfasserin aut Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<SPX</i< genes play important roles in the coordinated utilization of nitrogen (N) and phosphorus (P) in plants. However, a genome-wide analysis of the <i<SPX</i< family is still lacking. In this study, the gene structure and phylogenetic relationship of 160 <i<SPX</i< genes were systematically analyzed at the genome-wide level. Results revealed that <i<SPX</i< genes were highly conserved in plants. All <i<SPX</i< genes contained the conserved SPX domain containing motifs 2, 3, 4, and 8. The 160 <i<SPX</i< genes were divided into five clades and the <i<SPX</i< genes within the same clade shared a similar motif composition. P1BS <i<cis</i<–elements showed a high frequency in the promoter region of <i<SPX</i<s, indicating that <i<SPX</i< genes could interact with the P signal center regulatory gene <i<Phosphate Starvation Response1</i< (<i<PHR1</i<) in response to low P stress. Other <i<cis</i<–elements were also involved in plant development and biotic/abiotic stress, suggesting the functional diversity of <i<SPX</i<s. Further studies were conducted on the interaction network of three <i<SpSPXs</i<, revealing that these genes could interact with important components of the P signaling network. The expression profiles showed that <i<SpSPX</i<s responded sensitively to N and P deficiency stresses, thus playing a key regulatory function in P and N metabolism. Furthermore, the expression of <i<SpSPXs</i< under P and N deficiency stresses could be affected by environmental factors such as ABA treatment, osmotic, and LT stresses. Our study suggested that <i<SpSPXs</i< could be good candidates for enhancing the uptake ability of <i<Spirodela polyrhiza</i< for P nutrients in wastewater. These findings could broaden the understanding of the evolution and biological function of the <i<SPX</i< family and offer a foundation to further investigate this family in plants. SPX <i<Spirodela polyrhiza</i< phosphorus stress nitrogen stress gene structure gene expression profiling Cytology Xuyao Zhao verfasserin aut Yan Chen verfasserin aut Gaojie Li verfasserin aut Xiaozhe Li verfasserin aut Manli Xia verfasserin aut Zuoliang Sun verfasserin aut Yimeng Chen verfasserin aut Yixian Li verfasserin aut Lunguang Yao verfasserin aut Hongwei Hou verfasserin aut In Cells MDPI AG, 2012 11(2022), 7, p 1167 (DE-627)718622081 (DE-600)2661518-6 20734409 nnns volume:11 year:2022 number:7, p 1167 https://doi.org/10.3390/cells11071167 kostenfrei https://doaj.org/article/244b9b2d5edb409bb27d47fc599d8b85 kostenfrei https://www.mdpi.com/2073-4409/11/7/1167 kostenfrei https://doaj.org/toc/2073-4409 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 11 2022 7, p 1167
allfieldsGer	10.3390/cells11071167 doi (DE-627)DOAJ000886564 (DE-599)DOAJ244b9b2d5edb409bb27d47fc599d8b85 DE-627 ger DE-627 rakwb eng QH573-671 Jingjing Yang verfasserin aut Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<SPX</i< genes play important roles in the coordinated utilization of nitrogen (N) and phosphorus (P) in plants. However, a genome-wide analysis of the <i<SPX</i< family is still lacking. In this study, the gene structure and phylogenetic relationship of 160 <i<SPX</i< genes were systematically analyzed at the genome-wide level. Results revealed that <i<SPX</i< genes were highly conserved in plants. All <i<SPX</i< genes contained the conserved SPX domain containing motifs 2, 3, 4, and 8. The 160 <i<SPX</i< genes were divided into five clades and the <i<SPX</i< genes within the same clade shared a similar motif composition. P1BS <i<cis</i<–elements showed a high frequency in the promoter region of <i<SPX</i<s, indicating that <i<SPX</i< genes could interact with the P signal center regulatory gene <i<Phosphate Starvation Response1</i< (<i<PHR1</i<) in response to low P stress. Other <i<cis</i<–elements were also involved in plant development and biotic/abiotic stress, suggesting the functional diversity of <i<SPX</i<s. Further studies were conducted on the interaction network of three <i<SpSPXs</i<, revealing that these genes could interact with important components of the P signaling network. The expression profiles showed that <i<SpSPX</i<s responded sensitively to N and P deficiency stresses, thus playing a key regulatory function in P and N metabolism. Furthermore, the expression of <i<SpSPXs</i< under P and N deficiency stresses could be affected by environmental factors such as ABA treatment, osmotic, and LT stresses. Our study suggested that <i<SpSPXs</i< could be good candidates for enhancing the uptake ability of <i<Spirodela polyrhiza</i< for P nutrients in wastewater. These findings could broaden the understanding of the evolution and biological function of the <i<SPX</i< family and offer a foundation to further investigate this family in plants. SPX <i<Spirodela polyrhiza</i< phosphorus stress nitrogen stress gene structure gene expression profiling Cytology Xuyao Zhao verfasserin aut Yan Chen verfasserin aut Gaojie Li verfasserin aut Xiaozhe Li verfasserin aut Manli Xia verfasserin aut Zuoliang Sun verfasserin aut Yimeng Chen verfasserin aut Yixian Li verfasserin aut Lunguang Yao verfasserin aut Hongwei Hou verfasserin aut In Cells MDPI AG, 2012 11(2022), 7, p 1167 (DE-627)718622081 (DE-600)2661518-6 20734409 nnns volume:11 year:2022 number:7, p 1167 https://doi.org/10.3390/cells11071167 kostenfrei https://doaj.org/article/244b9b2d5edb409bb27d47fc599d8b85 kostenfrei https://www.mdpi.com/2073-4409/11/7/1167 kostenfrei https://doaj.org/toc/2073-4409 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 11 2022 7, p 1167
allfieldsSound	10.3390/cells11071167 doi (DE-627)DOAJ000886564 (DE-599)DOAJ244b9b2d5edb409bb27d47fc599d8b85 DE-627 ger DE-627 rakwb eng QH573-671 Jingjing Yang verfasserin aut Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<SPX</i< genes play important roles in the coordinated utilization of nitrogen (N) and phosphorus (P) in plants. However, a genome-wide analysis of the <i<SPX</i< family is still lacking. In this study, the gene structure and phylogenetic relationship of 160 <i<SPX</i< genes were systematically analyzed at the genome-wide level. Results revealed that <i<SPX</i< genes were highly conserved in plants. All <i<SPX</i< genes contained the conserved SPX domain containing motifs 2, 3, 4, and 8. The 160 <i<SPX</i< genes were divided into five clades and the <i<SPX</i< genes within the same clade shared a similar motif composition. P1BS <i<cis</i<–elements showed a high frequency in the promoter region of <i<SPX</i<s, indicating that <i<SPX</i< genes could interact with the P signal center regulatory gene <i<Phosphate Starvation Response1</i< (<i<PHR1</i<) in response to low P stress. Other <i<cis</i<–elements were also involved in plant development and biotic/abiotic stress, suggesting the functional diversity of <i<SPX</i<s. Further studies were conducted on the interaction network of three <i<SpSPXs</i<, revealing that these genes could interact with important components of the P signaling network. The expression profiles showed that <i<SpSPX</i<s responded sensitively to N and P deficiency stresses, thus playing a key regulatory function in P and N metabolism. Furthermore, the expression of <i<SpSPXs</i< under P and N deficiency stresses could be affected by environmental factors such as ABA treatment, osmotic, and LT stresses. Our study suggested that <i<SpSPXs</i< could be good candidates for enhancing the uptake ability of <i<Spirodela polyrhiza</i< for P nutrients in wastewater. These findings could broaden the understanding of the evolution and biological function of the <i<SPX</i< family and offer a foundation to further investigate this family in plants. SPX <i<Spirodela polyrhiza</i< phosphorus stress nitrogen stress gene structure gene expression profiling Cytology Xuyao Zhao verfasserin aut Yan Chen verfasserin aut Gaojie Li verfasserin aut Xiaozhe Li verfasserin aut Manli Xia verfasserin aut Zuoliang Sun verfasserin aut Yimeng Chen verfasserin aut Yixian Li verfasserin aut Lunguang Yao verfasserin aut Hongwei Hou verfasserin aut In Cells MDPI AG, 2012 11(2022), 7, p 1167 (DE-627)718622081 (DE-600)2661518-6 20734409 nnns volume:11 year:2022 number:7, p 1167 https://doi.org/10.3390/cells11071167 kostenfrei https://doaj.org/article/244b9b2d5edb409bb27d47fc599d8b85 kostenfrei https://www.mdpi.com/2073-4409/11/7/1167 kostenfrei https://doaj.org/toc/2073-4409 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 11 2022 7, p 1167
language	English
source	In Cells 11(2022), 7, p 1167 volume:11 year:2022 number:7, p 1167
sourceStr	In Cells 11(2022), 7, p 1167 volume:11 year:2022 number:7, p 1167
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	SPX <i<Spirodela polyrhiza</i< phosphorus stress nitrogen stress gene structure gene expression profiling Cytology
isfreeaccess_bool	true
container_title	Cells
authorswithroles_txt_mv	Jingjing Yang @@aut@@ Xuyao Zhao @@aut@@ Yan Chen @@aut@@ Gaojie Li @@aut@@ Xiaozhe Li @@aut@@ Manli Xia @@aut@@ Zuoliang Sun @@aut@@ Yimeng Chen @@aut@@ Yixian Li @@aut@@ Lunguang Yao @@aut@@ Hongwei Hou @@aut@@
publishDateDaySort_date	2022-01-01T00:00:00Z
hierarchy_top_id	718622081
id	DOAJ000886564
language_de	englisch
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callnumber-first	Q - Science
author	Jingjing Yang
spellingShingle	Jingjing Yang misc QH573-671 misc SPX misc <i<Spirodela polyrhiza</i< misc phosphorus stress misc nitrogen stress misc gene structure misc gene expression profiling misc Cytology Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses
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topic_title	QH573-671 Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses SPX <i<Spirodela polyrhiza</i< phosphorus stress nitrogen stress gene structure gene expression profiling
topic	misc QH573-671 misc SPX misc <i<Spirodela polyrhiza</i< misc phosphorus stress misc nitrogen stress misc gene structure misc gene expression profiling misc Cytology
topic_unstemmed	misc QH573-671 misc SPX misc <i<Spirodela polyrhiza</i< misc phosphorus stress misc nitrogen stress misc gene structure misc gene expression profiling misc Cytology
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title	Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses
ctrlnum	(DE-627)DOAJ000886564 (DE-599)DOAJ244b9b2d5edb409bb27d47fc599d8b85
title_full	Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses
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author_browse	Jingjing Yang Xuyao Zhao Yan Chen Gaojie Li Xiaozhe Li Manli Xia Zuoliang Sun Yimeng Chen Yixian Li Lunguang Yao Hongwei Hou
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author-letter	Jingjing Yang
doi_str_mv	10.3390/cells11071167
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title_sort	identification, structural, and expression analyses of <i<spx</i< genes in giant duckweed (<i<spirodela polyrhiza</i<) reveals its role in response to low phosphorus and nitrogen stresses
callnumber	QH573-671
title_auth	Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses
abstract	<i<SPX</i< genes play important roles in the coordinated utilization of nitrogen (N) and phosphorus (P) in plants. However, a genome-wide analysis of the <i<SPX</i< family is still lacking. In this study, the gene structure and phylogenetic relationship of 160 <i<SPX</i< genes were systematically analyzed at the genome-wide level. Results revealed that <i<SPX</i< genes were highly conserved in plants. All <i<SPX</i< genes contained the conserved SPX domain containing motifs 2, 3, 4, and 8. The 160 <i<SPX</i< genes were divided into five clades and the <i<SPX</i< genes within the same clade shared a similar motif composition. P1BS <i<cis</i<–elements showed a high frequency in the promoter region of <i<SPX</i<s, indicating that <i<SPX</i< genes could interact with the P signal center regulatory gene <i<Phosphate Starvation Response1</i< (<i<PHR1</i<) in response to low P stress. Other <i<cis</i<–elements were also involved in plant development and biotic/abiotic stress, suggesting the functional diversity of <i<SPX</i<s. Further studies were conducted on the interaction network of three <i<SpSPXs</i<, revealing that these genes could interact with important components of the P signaling network. The expression profiles showed that <i<SpSPX</i<s responded sensitively to N and P deficiency stresses, thus playing a key regulatory function in P and N metabolism. Furthermore, the expression of <i<SpSPXs</i< under P and N deficiency stresses could be affected by environmental factors such as ABA treatment, osmotic, and LT stresses. Our study suggested that <i<SpSPXs</i< could be good candidates for enhancing the uptake ability of <i<Spirodela polyrhiza</i< for P nutrients in wastewater. These findings could broaden the understanding of the evolution and biological function of the <i<SPX</i< family and offer a foundation to further investigate this family in plants.
abstractGer	<i<SPX</i< genes play important roles in the coordinated utilization of nitrogen (N) and phosphorus (P) in plants. However, a genome-wide analysis of the <i<SPX</i< family is still lacking. In this study, the gene structure and phylogenetic relationship of 160 <i<SPX</i< genes were systematically analyzed at the genome-wide level. Results revealed that <i<SPX</i< genes were highly conserved in plants. All <i<SPX</i< genes contained the conserved SPX domain containing motifs 2, 3, 4, and 8. The 160 <i<SPX</i< genes were divided into five clades and the <i<SPX</i< genes within the same clade shared a similar motif composition. P1BS <i<cis</i<–elements showed a high frequency in the promoter region of <i<SPX</i<s, indicating that <i<SPX</i< genes could interact with the P signal center regulatory gene <i<Phosphate Starvation Response1</i< (<i<PHR1</i<) in response to low P stress. Other <i<cis</i<–elements were also involved in plant development and biotic/abiotic stress, suggesting the functional diversity of <i<SPX</i<s. Further studies were conducted on the interaction network of three <i<SpSPXs</i<, revealing that these genes could interact with important components of the P signaling network. The expression profiles showed that <i<SpSPX</i<s responded sensitively to N and P deficiency stresses, thus playing a key regulatory function in P and N metabolism. Furthermore, the expression of <i<SpSPXs</i< under P and N deficiency stresses could be affected by environmental factors such as ABA treatment, osmotic, and LT stresses. Our study suggested that <i<SpSPXs</i< could be good candidates for enhancing the uptake ability of <i<Spirodela polyrhiza</i< for P nutrients in wastewater. These findings could broaden the understanding of the evolution and biological function of the <i<SPX</i< family and offer a foundation to further investigate this family in plants.
abstract_unstemmed	<i<SPX</i< genes play important roles in the coordinated utilization of nitrogen (N) and phosphorus (P) in plants. However, a genome-wide analysis of the <i<SPX</i< family is still lacking. In this study, the gene structure and phylogenetic relationship of 160 <i<SPX</i< genes were systematically analyzed at the genome-wide level. Results revealed that <i<SPX</i< genes were highly conserved in plants. All <i<SPX</i< genes contained the conserved SPX domain containing motifs 2, 3, 4, and 8. The 160 <i<SPX</i< genes were divided into five clades and the <i<SPX</i< genes within the same clade shared a similar motif composition. P1BS <i<cis</i<–elements showed a high frequency in the promoter region of <i<SPX</i<s, indicating that <i<SPX</i< genes could interact with the P signal center regulatory gene <i<Phosphate Starvation Response1</i< (<i<PHR1</i<) in response to low P stress. Other <i<cis</i<–elements were also involved in plant development and biotic/abiotic stress, suggesting the functional diversity of <i<SPX</i<s. Further studies were conducted on the interaction network of three <i<SpSPXs</i<, revealing that these genes could interact with important components of the P signaling network. The expression profiles showed that <i<SpSPX</i<s responded sensitively to N and P deficiency stresses, thus playing a key regulatory function in P and N metabolism. Furthermore, the expression of <i<SpSPXs</i< under P and N deficiency stresses could be affected by environmental factors such as ABA treatment, osmotic, and LT stresses. Our study suggested that <i<SpSPXs</i< could be good candidates for enhancing the uptake ability of <i<Spirodela polyrhiza</i< for P nutrients in wastewater. These findings could broaden the understanding of the evolution and biological function of the <i<SPX</i< family and offer a foundation to further investigate this family in plants.
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title_short	Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses
url	https://doi.org/10.3390/cells11071167 https://doaj.org/article/244b9b2d5edb409bb27d47fc599d8b85 https://www.mdpi.com/2073-4409/11/7/1167 https://doaj.org/toc/2073-4409
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Identification, Structural, and Expression Analyses of <i<SPX</i< Genes in Giant Duckweed (<i<Spirodela polyrhiza</i<) Reveals Its Role in Response to Low Phosphorus and Nitrogen Stresses

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