Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species

Soluble sugars and organic acids are the main determinants of fruit organoleptic quality. To investigate the genes responsible for the soluble sugar and organic acid contents of apple fruits, a label-free proteomic analysis involving liquid chromatography (LC)-mass spectrometry (MS)/MS was conducted...
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Autor*in:	Baiquan Ma [verfasserIn] Yuduan Ding [verfasserIn] Cuiying Li [verfasserIn] Mingjun Li [verfasserIn] Fengwang Ma [verfasserIn] Yangyang Yuan [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2019

Schlagwörter:	apple soluble sugars organic acids proteomics parallel reaction monitoring

Übergeordnetes Werk:	In: Plants - MDPI AG, 2013, 8(2019), 11, p 488
Übergeordnetes Werk:	volume:8 ; year:2019 ; number:11, p 488

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3390/plants8110488

Katalog-ID:	DOAJ018101011

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spelling	10.3390/plants8110488 doi (DE-627)DOAJ018101011 (DE-599)DOAJb2eba87998f34ff583ba9873272251c5 DE-627 ger DE-627 rakwb eng QK1-989 Baiquan Ma verfasserin aut Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Soluble sugars and organic acids are the main determinants of fruit organoleptic quality. To investigate the genes responsible for the soluble sugar and organic acid contents of apple fruits, a label-free proteomic analysis involving liquid chromatography (LC)-mass spectrometry (MS)/MS was conducted with the fruits of two <i<Malus</i< species, <i<M. sargentii</i< and <i<M. niedzwetzkyana</i<, which exhibit significant differences in soluble sugar and organic acid contents. A total of 13,036 unique peptides and 1,079 differentially-expressed proteins were identified. To verify the LC-MS/MS results, five candidate proteins were further analyzed by parallel reaction monitoring. The results were consistent with the LC-MS/MS data, which confirmed the reliability of the LC-MS/MS analysis. The functional annotation of the differentially-expressed proteins, based on the gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases, revealed that they were mainly related to biological processes and cellular components. Additionally, the main enriched KEGG pathways were related to metabolic processes. Moreover, 31 proteins involved in soluble sugar metabolism, organic acid metabolism, and H<sup<+</sup<-transport were identified. The results of this study may be useful for the comprehensive characterization of the complex mechanism regulating apple fruit-soluble sugar and organic acid contents. apple soluble sugars organic acids proteomics parallel reaction monitoring Botany Yuduan Ding verfasserin aut Cuiying Li verfasserin aut Mingjun Li verfasserin aut Fengwang Ma verfasserin aut Yangyang Yuan verfasserin aut In Plants MDPI AG, 2013 8(2019), 11, p 488 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:8 year:2019 number:11, p 488 https://doi.org/10.3390/plants8110488 kostenfrei https://doaj.org/article/b2eba87998f34ff583ba9873272251c5 kostenfrei https://www.mdpi.com/2223-7747/8/11/488 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2019 11, p 488
allfields_unstemmed	10.3390/plants8110488 doi (DE-627)DOAJ018101011 (DE-599)DOAJb2eba87998f34ff583ba9873272251c5 DE-627 ger DE-627 rakwb eng QK1-989 Baiquan Ma verfasserin aut Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Soluble sugars and organic acids are the main determinants of fruit organoleptic quality. To investigate the genes responsible for the soluble sugar and organic acid contents of apple fruits, a label-free proteomic analysis involving liquid chromatography (LC)-mass spectrometry (MS)/MS was conducted with the fruits of two <i<Malus</i< species, <i<M. sargentii</i< and <i<M. niedzwetzkyana</i<, which exhibit significant differences in soluble sugar and organic acid contents. A total of 13,036 unique peptides and 1,079 differentially-expressed proteins were identified. To verify the LC-MS/MS results, five candidate proteins were further analyzed by parallel reaction monitoring. The results were consistent with the LC-MS/MS data, which confirmed the reliability of the LC-MS/MS analysis. The functional annotation of the differentially-expressed proteins, based on the gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases, revealed that they were mainly related to biological processes and cellular components. Additionally, the main enriched KEGG pathways were related to metabolic processes. Moreover, 31 proteins involved in soluble sugar metabolism, organic acid metabolism, and H<sup<+</sup<-transport were identified. The results of this study may be useful for the comprehensive characterization of the complex mechanism regulating apple fruit-soluble sugar and organic acid contents. apple soluble sugars organic acids proteomics parallel reaction monitoring Botany Yuduan Ding verfasserin aut Cuiying Li verfasserin aut Mingjun Li verfasserin aut Fengwang Ma verfasserin aut Yangyang Yuan verfasserin aut In Plants MDPI AG, 2013 8(2019), 11, p 488 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:8 year:2019 number:11, p 488 https://doi.org/10.3390/plants8110488 kostenfrei https://doaj.org/article/b2eba87998f34ff583ba9873272251c5 kostenfrei https://www.mdpi.com/2223-7747/8/11/488 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2019 11, p 488
allfieldsGer	10.3390/plants8110488 doi (DE-627)DOAJ018101011 (DE-599)DOAJb2eba87998f34ff583ba9873272251c5 DE-627 ger DE-627 rakwb eng QK1-989 Baiquan Ma verfasserin aut Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Soluble sugars and organic acids are the main determinants of fruit organoleptic quality. To investigate the genes responsible for the soluble sugar and organic acid contents of apple fruits, a label-free proteomic analysis involving liquid chromatography (LC)-mass spectrometry (MS)/MS was conducted with the fruits of two <i<Malus</i< species, <i<M. sargentii</i< and <i<M. niedzwetzkyana</i<, which exhibit significant differences in soluble sugar and organic acid contents. A total of 13,036 unique peptides and 1,079 differentially-expressed proteins were identified. To verify the LC-MS/MS results, five candidate proteins were further analyzed by parallel reaction monitoring. The results were consistent with the LC-MS/MS data, which confirmed the reliability of the LC-MS/MS analysis. The functional annotation of the differentially-expressed proteins, based on the gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases, revealed that they were mainly related to biological processes and cellular components. Additionally, the main enriched KEGG pathways were related to metabolic processes. Moreover, 31 proteins involved in soluble sugar metabolism, organic acid metabolism, and H<sup<+</sup<-transport were identified. The results of this study may be useful for the comprehensive characterization of the complex mechanism regulating apple fruit-soluble sugar and organic acid contents. apple soluble sugars organic acids proteomics parallel reaction monitoring Botany Yuduan Ding verfasserin aut Cuiying Li verfasserin aut Mingjun Li verfasserin aut Fengwang Ma verfasserin aut Yangyang Yuan verfasserin aut In Plants MDPI AG, 2013 8(2019), 11, p 488 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:8 year:2019 number:11, p 488 https://doi.org/10.3390/plants8110488 kostenfrei https://doaj.org/article/b2eba87998f34ff583ba9873272251c5 kostenfrei https://www.mdpi.com/2223-7747/8/11/488 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2019 11, p 488
allfieldsSound	10.3390/plants8110488 doi (DE-627)DOAJ018101011 (DE-599)DOAJb2eba87998f34ff583ba9873272251c5 DE-627 ger DE-627 rakwb eng QK1-989 Baiquan Ma verfasserin aut Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Soluble sugars and organic acids are the main determinants of fruit organoleptic quality. To investigate the genes responsible for the soluble sugar and organic acid contents of apple fruits, a label-free proteomic analysis involving liquid chromatography (LC)-mass spectrometry (MS)/MS was conducted with the fruits of two <i<Malus</i< species, <i<M. sargentii</i< and <i<M. niedzwetzkyana</i<, which exhibit significant differences in soluble sugar and organic acid contents. A total of 13,036 unique peptides and 1,079 differentially-expressed proteins were identified. To verify the LC-MS/MS results, five candidate proteins were further analyzed by parallel reaction monitoring. The results were consistent with the LC-MS/MS data, which confirmed the reliability of the LC-MS/MS analysis. The functional annotation of the differentially-expressed proteins, based on the gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases, revealed that they were mainly related to biological processes and cellular components. Additionally, the main enriched KEGG pathways were related to metabolic processes. Moreover, 31 proteins involved in soluble sugar metabolism, organic acid metabolism, and H<sup<+</sup<-transport were identified. The results of this study may be useful for the comprehensive characterization of the complex mechanism regulating apple fruit-soluble sugar and organic acid contents. apple soluble sugars organic acids proteomics parallel reaction monitoring Botany Yuduan Ding verfasserin aut Cuiying Li verfasserin aut Mingjun Li verfasserin aut Fengwang Ma verfasserin aut Yangyang Yuan verfasserin aut In Plants MDPI AG, 2013 8(2019), 11, p 488 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:8 year:2019 number:11, p 488 https://doi.org/10.3390/plants8110488 kostenfrei https://doaj.org/article/b2eba87998f34ff583ba9873272251c5 kostenfrei https://www.mdpi.com/2223-7747/8/11/488 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2019 11, p 488
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callnumber-first	Q - Science
author	Baiquan Ma
spellingShingle	Baiquan Ma misc QK1-989 misc apple misc soluble sugars misc organic acids misc proteomics misc parallel reaction monitoring misc Botany Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species
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topic_title	QK1-989 Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species apple soluble sugars organic acids proteomics parallel reaction monitoring
topic	misc QK1-989 misc apple misc soluble sugars misc organic acids misc proteomics misc parallel reaction monitoring misc Botany
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title	Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species
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title_full	Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species
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title_sort	comparative proteomic analysis reveals key proteins linked to the accumulation of soluble sugars and organic acids in the mature fruits of the wild <i<malus</i< species
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title_auth	Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species
abstract	Soluble sugars and organic acids are the main determinants of fruit organoleptic quality. To investigate the genes responsible for the soluble sugar and organic acid contents of apple fruits, a label-free proteomic analysis involving liquid chromatography (LC)-mass spectrometry (MS)/MS was conducted with the fruits of two <i<Malus</i< species, <i<M. sargentii</i< and <i<M. niedzwetzkyana</i<, which exhibit significant differences in soluble sugar and organic acid contents. A total of 13,036 unique peptides and 1,079 differentially-expressed proteins were identified. To verify the LC-MS/MS results, five candidate proteins were further analyzed by parallel reaction monitoring. The results were consistent with the LC-MS/MS data, which confirmed the reliability of the LC-MS/MS analysis. The functional annotation of the differentially-expressed proteins, based on the gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases, revealed that they were mainly related to biological processes and cellular components. Additionally, the main enriched KEGG pathways were related to metabolic processes. Moreover, 31 proteins involved in soluble sugar metabolism, organic acid metabolism, and H<sup<+</sup<-transport were identified. The results of this study may be useful for the comprehensive characterization of the complex mechanism regulating apple fruit-soluble sugar and organic acid contents.
abstractGer	Soluble sugars and organic acids are the main determinants of fruit organoleptic quality. To investigate the genes responsible for the soluble sugar and organic acid contents of apple fruits, a label-free proteomic analysis involving liquid chromatography (LC)-mass spectrometry (MS)/MS was conducted with the fruits of two <i<Malus</i< species, <i<M. sargentii</i< and <i<M. niedzwetzkyana</i<, which exhibit significant differences in soluble sugar and organic acid contents. A total of 13,036 unique peptides and 1,079 differentially-expressed proteins were identified. To verify the LC-MS/MS results, five candidate proteins were further analyzed by parallel reaction monitoring. The results were consistent with the LC-MS/MS data, which confirmed the reliability of the LC-MS/MS analysis. The functional annotation of the differentially-expressed proteins, based on the gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases, revealed that they were mainly related to biological processes and cellular components. Additionally, the main enriched KEGG pathways were related to metabolic processes. Moreover, 31 proteins involved in soluble sugar metabolism, organic acid metabolism, and H<sup<+</sup<-transport were identified. The results of this study may be useful for the comprehensive characterization of the complex mechanism regulating apple fruit-soluble sugar and organic acid contents.
abstract_unstemmed	Soluble sugars and organic acids are the main determinants of fruit organoleptic quality. To investigate the genes responsible for the soluble sugar and organic acid contents of apple fruits, a label-free proteomic analysis involving liquid chromatography (LC)-mass spectrometry (MS)/MS was conducted with the fruits of two <i<Malus</i< species, <i<M. sargentii</i< and <i<M. niedzwetzkyana</i<, which exhibit significant differences in soluble sugar and organic acid contents. A total of 13,036 unique peptides and 1,079 differentially-expressed proteins were identified. To verify the LC-MS/MS results, five candidate proteins were further analyzed by parallel reaction monitoring. The results were consistent with the LC-MS/MS data, which confirmed the reliability of the LC-MS/MS analysis. The functional annotation of the differentially-expressed proteins, based on the gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases, revealed that they were mainly related to biological processes and cellular components. Additionally, the main enriched KEGG pathways were related to metabolic processes. Moreover, 31 proteins involved in soluble sugar metabolism, organic acid metabolism, and H<sup<+</sup<-transport were identified. The results of this study may be useful for the comprehensive characterization of the complex mechanism regulating apple fruit-soluble sugar and organic acid contents.
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title_short	Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species
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Comparative Proteomic Analysis Reveals Key Proteins Linked to the Accumulation of Soluble Sugars and Organic Acids in the Mature Fruits of the Wild <i<Malus</i< Species

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