Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<)
The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< gen...
Ausführliche Beschreibung
Autor*in: |
Jinqiu Li [verfasserIn] Yu Duan [verfasserIn] Zhaolan Han [verfasserIn] Xiaowen Shang [verfasserIn] Kexin Zhang [verfasserIn] Zhongwei Zou [verfasserIn] Yuanchun Ma [verfasserIn] Fang Li [verfasserIn] Wanping Fang [verfasserIn] Xujun Zhu [verfasserIn] |
---|
Format: |
E-Artikel |
---|---|
Sprache: |
Englisch |
Erschienen: |
2021 |
---|
Schlagwörter: |
---|
Übergeordnetes Werk: |
In: Plants - MDPI AG, 2013, 10(2021), 6, p 1055 |
---|---|
Übergeordnetes Werk: |
volume:10 ; year:2021 ; number:6, p 1055 |
Links: |
---|
DOI / URN: |
10.3390/plants10061055 |
---|
Katalog-ID: |
DOAJ019433727 |
---|
LEADER | 01000caa a22002652 4500 | ||
---|---|---|---|
001 | DOAJ019433727 | ||
003 | DE-627 | ||
005 | 20240412180304.0 | ||
007 | cr uuu---uuuuu | ||
008 | 230226s2021 xx |||||o 00| ||eng c | ||
024 | 7 | |a 10.3390/plants10061055 |2 doi | |
035 | |a (DE-627)DOAJ019433727 | ||
035 | |a (DE-599)DOAJ146ab61128a64314b661c34dc0a06a6b | ||
040 | |a DE-627 |b ger |c DE-627 |e rakwb | ||
041 | |a eng | ||
050 | 0 | |a QK1-989 | |
100 | 0 | |a Jinqiu Li |e verfasserin |4 aut | |
245 | 1 | 0 | |a Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) |
264 | 1 | |c 2021 | |
336 | |a Text |b txt |2 rdacontent | ||
337 | |a Computermedien |b c |2 rdamedia | ||
338 | |a Online-Ressource |b cr |2 rdacarrier | ||
520 | |a The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants. | ||
650 | 4 | |a <i<Camellia sinensis</i< | |
650 | 4 | |a <i<NRAMP</i< | |
650 | 4 | |a Pb treatment | |
650 | 4 | |a gene expression | |
653 | 0 | |a Botany | |
700 | 0 | |a Yu Duan |e verfasserin |4 aut | |
700 | 0 | |a Zhaolan Han |e verfasserin |4 aut | |
700 | 0 | |a Xiaowen Shang |e verfasserin |4 aut | |
700 | 0 | |a Kexin Zhang |e verfasserin |4 aut | |
700 | 0 | |a Zhongwei Zou |e verfasserin |4 aut | |
700 | 0 | |a Yuanchun Ma |e verfasserin |4 aut | |
700 | 0 | |a Fang Li |e verfasserin |4 aut | |
700 | 0 | |a Wanping Fang |e verfasserin |4 aut | |
700 | 0 | |a Xujun Zhu |e verfasserin |4 aut | |
773 | 0 | 8 | |i In |t Plants |d MDPI AG, 2013 |g 10(2021), 6, p 1055 |w (DE-627)737288345 |w (DE-600)2704341-1 |x 22237747 |7 nnns |
773 | 1 | 8 | |g volume:10 |g year:2021 |g number:6, p 1055 |
856 | 4 | 0 | |u https://doi.org/10.3390/plants10061055 |z kostenfrei |
856 | 4 | 0 | |u https://doaj.org/article/146ab61128a64314b661c34dc0a06a6b |z kostenfrei |
856 | 4 | 0 | |u https://www.mdpi.com/2223-7747/10/6/1055 |z kostenfrei |
856 | 4 | 2 | |u https://doaj.org/toc/2223-7747 |y Journal toc |z kostenfrei |
912 | |a GBV_USEFLAG_A | ||
912 | |a SYSFLAG_A | ||
912 | |a GBV_DOAJ | ||
912 | |a GBV_ILN_20 | ||
912 | |a GBV_ILN_22 | ||
912 | |a GBV_ILN_23 | ||
912 | |a GBV_ILN_24 | ||
912 | |a GBV_ILN_39 | ||
912 | |a GBV_ILN_40 | ||
912 | |a GBV_ILN_60 | ||
912 | |a GBV_ILN_62 | ||
912 | |a GBV_ILN_63 | ||
912 | |a GBV_ILN_65 | ||
912 | |a GBV_ILN_69 | ||
912 | |a GBV_ILN_70 | ||
912 | |a GBV_ILN_73 | ||
912 | |a GBV_ILN_95 | ||
912 | |a GBV_ILN_105 | ||
912 | |a GBV_ILN_110 | ||
912 | |a GBV_ILN_151 | ||
912 | |a GBV_ILN_161 | ||
912 | |a GBV_ILN_213 | ||
912 | |a GBV_ILN_230 | ||
912 | |a GBV_ILN_285 | ||
912 | |a GBV_ILN_293 | ||
912 | |a GBV_ILN_602 | ||
912 | |a GBV_ILN_2014 | ||
912 | |a GBV_ILN_4012 | ||
912 | |a GBV_ILN_4037 | ||
912 | |a GBV_ILN_4112 | ||
912 | |a GBV_ILN_4125 | ||
912 | |a GBV_ILN_4126 | ||
912 | |a GBV_ILN_4249 | ||
912 | |a GBV_ILN_4305 | ||
912 | |a GBV_ILN_4306 | ||
912 | |a GBV_ILN_4307 | ||
912 | |a GBV_ILN_4313 | ||
912 | |a GBV_ILN_4322 | ||
912 | |a GBV_ILN_4323 | ||
912 | |a GBV_ILN_4324 | ||
912 | |a GBV_ILN_4325 | ||
912 | |a GBV_ILN_4338 | ||
912 | |a GBV_ILN_4367 | ||
912 | |a GBV_ILN_4700 | ||
951 | |a AR | ||
952 | |d 10 |j 2021 |e 6, p 1055 |
author_variant |
j l jl y d yd z h zh x s xs k z kz z z zz y m ym f l fl w f wf x z xz |
---|---|
matchkey_str |
article:22237747:2021----::eoeiedniiainnepesoaayiotenapfmlgnsne |
hierarchy_sort_str |
2021 |
callnumber-subject-code |
QK |
publishDate |
2021 |
allfields |
10.3390/plants10061055 doi (DE-627)DOAJ019433727 (DE-599)DOAJ146ab61128a64314b661c34dc0a06a6b DE-627 ger DE-627 rakwb eng QK1-989 Jinqiu Li verfasserin aut Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants. <i<Camellia sinensis</i< <i<NRAMP</i< Pb treatment gene expression Botany Yu Duan verfasserin aut Zhaolan Han verfasserin aut Xiaowen Shang verfasserin aut Kexin Zhang verfasserin aut Zhongwei Zou verfasserin aut Yuanchun Ma verfasserin aut Fang Li verfasserin aut Wanping Fang verfasserin aut Xujun Zhu verfasserin aut In Plants MDPI AG, 2013 10(2021), 6, p 1055 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:10 year:2021 number:6, p 1055 https://doi.org/10.3390/plants10061055 kostenfrei https://doaj.org/article/146ab61128a64314b661c34dc0a06a6b kostenfrei https://www.mdpi.com/2223-7747/10/6/1055 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2021 6, p 1055 |
spelling |
10.3390/plants10061055 doi (DE-627)DOAJ019433727 (DE-599)DOAJ146ab61128a64314b661c34dc0a06a6b DE-627 ger DE-627 rakwb eng QK1-989 Jinqiu Li verfasserin aut Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants. <i<Camellia sinensis</i< <i<NRAMP</i< Pb treatment gene expression Botany Yu Duan verfasserin aut Zhaolan Han verfasserin aut Xiaowen Shang verfasserin aut Kexin Zhang verfasserin aut Zhongwei Zou verfasserin aut Yuanchun Ma verfasserin aut Fang Li verfasserin aut Wanping Fang verfasserin aut Xujun Zhu verfasserin aut In Plants MDPI AG, 2013 10(2021), 6, p 1055 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:10 year:2021 number:6, p 1055 https://doi.org/10.3390/plants10061055 kostenfrei https://doaj.org/article/146ab61128a64314b661c34dc0a06a6b kostenfrei https://www.mdpi.com/2223-7747/10/6/1055 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2021 6, p 1055 |
allfields_unstemmed |
10.3390/plants10061055 doi (DE-627)DOAJ019433727 (DE-599)DOAJ146ab61128a64314b661c34dc0a06a6b DE-627 ger DE-627 rakwb eng QK1-989 Jinqiu Li verfasserin aut Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants. <i<Camellia sinensis</i< <i<NRAMP</i< Pb treatment gene expression Botany Yu Duan verfasserin aut Zhaolan Han verfasserin aut Xiaowen Shang verfasserin aut Kexin Zhang verfasserin aut Zhongwei Zou verfasserin aut Yuanchun Ma verfasserin aut Fang Li verfasserin aut Wanping Fang verfasserin aut Xujun Zhu verfasserin aut In Plants MDPI AG, 2013 10(2021), 6, p 1055 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:10 year:2021 number:6, p 1055 https://doi.org/10.3390/plants10061055 kostenfrei https://doaj.org/article/146ab61128a64314b661c34dc0a06a6b kostenfrei https://www.mdpi.com/2223-7747/10/6/1055 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2021 6, p 1055 |
allfieldsGer |
10.3390/plants10061055 doi (DE-627)DOAJ019433727 (DE-599)DOAJ146ab61128a64314b661c34dc0a06a6b DE-627 ger DE-627 rakwb eng QK1-989 Jinqiu Li verfasserin aut Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants. <i<Camellia sinensis</i< <i<NRAMP</i< Pb treatment gene expression Botany Yu Duan verfasserin aut Zhaolan Han verfasserin aut Xiaowen Shang verfasserin aut Kexin Zhang verfasserin aut Zhongwei Zou verfasserin aut Yuanchun Ma verfasserin aut Fang Li verfasserin aut Wanping Fang verfasserin aut Xujun Zhu verfasserin aut In Plants MDPI AG, 2013 10(2021), 6, p 1055 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:10 year:2021 number:6, p 1055 https://doi.org/10.3390/plants10061055 kostenfrei https://doaj.org/article/146ab61128a64314b661c34dc0a06a6b kostenfrei https://www.mdpi.com/2223-7747/10/6/1055 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2021 6, p 1055 |
allfieldsSound |
10.3390/plants10061055 doi (DE-627)DOAJ019433727 (DE-599)DOAJ146ab61128a64314b661c34dc0a06a6b DE-627 ger DE-627 rakwb eng QK1-989 Jinqiu Li verfasserin aut Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants. <i<Camellia sinensis</i< <i<NRAMP</i< Pb treatment gene expression Botany Yu Duan verfasserin aut Zhaolan Han verfasserin aut Xiaowen Shang verfasserin aut Kexin Zhang verfasserin aut Zhongwei Zou verfasserin aut Yuanchun Ma verfasserin aut Fang Li verfasserin aut Wanping Fang verfasserin aut Xujun Zhu verfasserin aut In Plants MDPI AG, 2013 10(2021), 6, p 1055 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:10 year:2021 number:6, p 1055 https://doi.org/10.3390/plants10061055 kostenfrei https://doaj.org/article/146ab61128a64314b661c34dc0a06a6b kostenfrei https://www.mdpi.com/2223-7747/10/6/1055 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2021 6, p 1055 |
language |
English |
source |
In Plants 10(2021), 6, p 1055 volume:10 year:2021 number:6, p 1055 |
sourceStr |
In Plants 10(2021), 6, p 1055 volume:10 year:2021 number:6, p 1055 |
format_phy_str_mv |
Article |
institution |
findex.gbv.de |
topic_facet |
<i<Camellia sinensis</i< <i<NRAMP</i< Pb treatment gene expression Botany |
isfreeaccess_bool |
true |
container_title |
Plants |
authorswithroles_txt_mv |
Jinqiu Li @@aut@@ Yu Duan @@aut@@ Zhaolan Han @@aut@@ Xiaowen Shang @@aut@@ Kexin Zhang @@aut@@ Zhongwei Zou @@aut@@ Yuanchun Ma @@aut@@ Fang Li @@aut@@ Wanping Fang @@aut@@ Xujun Zhu @@aut@@ |
publishDateDaySort_date |
2021-01-01T00:00:00Z |
hierarchy_top_id |
737288345 |
id |
DOAJ019433727 |
language_de |
englisch |
fullrecord |
<?xml version="1.0" encoding="UTF-8"?><collection xmlns="http://www.loc.gov/MARC21/slim"><record><leader>01000caa a22002652 4500</leader><controlfield tag="001">DOAJ019433727</controlfield><controlfield tag="003">DE-627</controlfield><controlfield tag="005">20240412180304.0</controlfield><controlfield tag="007">cr uuu---uuuuu</controlfield><controlfield tag="008">230226s2021 xx |||||o 00| ||eng c</controlfield><datafield tag="024" ind1="7" ind2=" "><subfield code="a">10.3390/plants10061055</subfield><subfield code="2">doi</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(DE-627)DOAJ019433727</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(DE-599)DOAJ146ab61128a64314b661c34dc0a06a6b</subfield></datafield><datafield tag="040" ind1=" " ind2=" "><subfield code="a">DE-627</subfield><subfield code="b">ger</subfield><subfield code="c">DE-627</subfield><subfield code="e">rakwb</subfield></datafield><datafield tag="041" ind1=" " ind2=" "><subfield code="a">eng</subfield></datafield><datafield tag="050" ind1=" " ind2="0"><subfield code="a">QK1-989</subfield></datafield><datafield tag="100" ind1="0" ind2=" "><subfield code="a">Jinqiu Li</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="245" ind1="1" ind2="0"><subfield code="a">Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<)</subfield></datafield><datafield tag="264" ind1=" " ind2="1"><subfield code="c">2021</subfield></datafield><datafield tag="336" ind1=" " ind2=" "><subfield code="a">Text</subfield><subfield code="b">txt</subfield><subfield code="2">rdacontent</subfield></datafield><datafield tag="337" ind1=" " ind2=" "><subfield code="a">Computermedien</subfield><subfield code="b">c</subfield><subfield code="2">rdamedia</subfield></datafield><datafield tag="338" ind1=" " ind2=" "><subfield code="a">Online-Ressource</subfield><subfield code="b">cr</subfield><subfield code="2">rdacarrier</subfield></datafield><datafield tag="520" ind1=" " ind2=" "><subfield code="a">The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants.</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a"><i<Camellia sinensis</i<</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a"><i<NRAMP</i<</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Pb treatment</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">gene expression</subfield></datafield><datafield tag="653" ind1=" " ind2="0"><subfield code="a">Botany</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Yu Duan</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Zhaolan Han</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Xiaowen Shang</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Kexin Zhang</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Zhongwei Zou</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Yuanchun Ma</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Fang Li</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Wanping Fang</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Xujun Zhu</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="773" ind1="0" ind2="8"><subfield code="i">In</subfield><subfield code="t">Plants</subfield><subfield code="d">MDPI AG, 2013</subfield><subfield code="g">10(2021), 6, p 1055</subfield><subfield code="w">(DE-627)737288345</subfield><subfield code="w">(DE-600)2704341-1</subfield><subfield code="x">22237747</subfield><subfield code="7">nnns</subfield></datafield><datafield tag="773" ind1="1" ind2="8"><subfield code="g">volume:10</subfield><subfield code="g">year:2021</subfield><subfield code="g">number:6, p 1055</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://doi.org/10.3390/plants10061055</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://doaj.org/article/146ab61128a64314b661c34dc0a06a6b</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://www.mdpi.com/2223-7747/10/6/1055</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="2"><subfield code="u">https://doaj.org/toc/2223-7747</subfield><subfield code="y">Journal toc</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_USEFLAG_A</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">SYSFLAG_A</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_DOAJ</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_20</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_22</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_23</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_24</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_39</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_40</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_60</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_62</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_63</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_65</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_69</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_70</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_73</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_95</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_105</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_110</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_151</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_161</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_213</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_230</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_285</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_293</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_602</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_2014</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4012</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4037</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4112</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4125</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4126</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4249</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4305</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4306</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4307</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4313</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4322</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4323</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4324</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4325</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4338</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4367</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4700</subfield></datafield><datafield tag="951" ind1=" " ind2=" "><subfield code="a">AR</subfield></datafield><datafield tag="952" ind1=" " ind2=" "><subfield code="d">10</subfield><subfield code="j">2021</subfield><subfield code="e">6, p 1055</subfield></datafield></record></collection>
|
callnumber-first |
Q - Science |
author |
Jinqiu Li |
spellingShingle |
Jinqiu Li misc QK1-989 misc <i<Camellia sinensis</i< misc <i<NRAMP</i< misc Pb treatment misc gene expression misc Botany Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) |
authorStr |
Jinqiu Li |
ppnlink_with_tag_str_mv |
@@773@@(DE-627)737288345 |
format |
electronic Article |
delete_txt_mv |
keep |
author_role |
aut aut aut aut aut aut aut aut aut aut |
collection |
DOAJ |
remote_str |
true |
callnumber-label |
QK1-989 |
illustrated |
Not Illustrated |
issn |
22237747 |
topic_title |
QK1-989 Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) <i<Camellia sinensis</i< <i<NRAMP</i< Pb treatment gene expression |
topic |
misc QK1-989 misc <i<Camellia sinensis</i< misc <i<NRAMP</i< misc Pb treatment misc gene expression misc Botany |
topic_unstemmed |
misc QK1-989 misc <i<Camellia sinensis</i< misc <i<NRAMP</i< misc Pb treatment misc gene expression misc Botany |
topic_browse |
misc QK1-989 misc <i<Camellia sinensis</i< misc <i<NRAMP</i< misc Pb treatment misc gene expression misc Botany |
format_facet |
Elektronische Aufsätze Aufsätze Elektronische Ressource |
format_main_str_mv |
Text Zeitschrift/Artikel |
carriertype_str_mv |
cr |
hierarchy_parent_title |
Plants |
hierarchy_parent_id |
737288345 |
hierarchy_top_title |
Plants |
isfreeaccess_txt |
true |
familylinks_str_mv |
(DE-627)737288345 (DE-600)2704341-1 |
title |
Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) |
ctrlnum |
(DE-627)DOAJ019433727 (DE-599)DOAJ146ab61128a64314b661c34dc0a06a6b |
title_full |
Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) |
author_sort |
Jinqiu Li |
journal |
Plants |
journalStr |
Plants |
callnumber-first-code |
Q |
lang_code |
eng |
isOA_bool |
true |
recordtype |
marc |
publishDateSort |
2021 |
contenttype_str_mv |
txt |
author_browse |
Jinqiu Li Yu Duan Zhaolan Han Xiaowen Shang Kexin Zhang Zhongwei Zou Yuanchun Ma Fang Li Wanping Fang Xujun Zhu |
container_volume |
10 |
class |
QK1-989 |
format_se |
Elektronische Aufsätze |
author-letter |
Jinqiu Li |
doi_str_mv |
10.3390/plants10061055 |
author2-role |
verfasserin |
title_sort |
genome-wide identification and expression analysis of the <i<nramp</i< family genes in tea plant (<i<camellia sinensis</i<) |
callnumber |
QK1-989 |
title_auth |
Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) |
abstract |
The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants. |
abstractGer |
The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants. |
abstract_unstemmed |
The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants. |
collection_details |
GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 |
container_issue |
6, p 1055 |
title_short |
Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<) |
url |
https://doi.org/10.3390/plants10061055 https://doaj.org/article/146ab61128a64314b661c34dc0a06a6b https://www.mdpi.com/2223-7747/10/6/1055 https://doaj.org/toc/2223-7747 |
remote_bool |
true |
author2 |
Yu Duan Zhaolan Han Xiaowen Shang Kexin Zhang Zhongwei Zou Yuanchun Ma Fang Li Wanping Fang Xujun Zhu |
author2Str |
Yu Duan Zhaolan Han Xiaowen Shang Kexin Zhang Zhongwei Zou Yuanchun Ma Fang Li Wanping Fang Xujun Zhu |
ppnlink |
737288345 |
callnumber-subject |
QK - Botany |
mediatype_str_mv |
c |
isOA_txt |
true |
hochschulschrift_bool |
false |
doi_str |
10.3390/plants10061055 |
callnumber-a |
QK1-989 |
up_date |
2024-07-03T23:29:21.885Z |
_version_ |
1803602479688974336 |
fullrecord_marcxml |
<?xml version="1.0" encoding="UTF-8"?><collection xmlns="http://www.loc.gov/MARC21/slim"><record><leader>01000caa a22002652 4500</leader><controlfield tag="001">DOAJ019433727</controlfield><controlfield tag="003">DE-627</controlfield><controlfield tag="005">20240412180304.0</controlfield><controlfield tag="007">cr uuu---uuuuu</controlfield><controlfield tag="008">230226s2021 xx |||||o 00| ||eng c</controlfield><datafield tag="024" ind1="7" ind2=" "><subfield code="a">10.3390/plants10061055</subfield><subfield code="2">doi</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(DE-627)DOAJ019433727</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(DE-599)DOAJ146ab61128a64314b661c34dc0a06a6b</subfield></datafield><datafield tag="040" ind1=" " ind2=" "><subfield code="a">DE-627</subfield><subfield code="b">ger</subfield><subfield code="c">DE-627</subfield><subfield code="e">rakwb</subfield></datafield><datafield tag="041" ind1=" " ind2=" "><subfield code="a">eng</subfield></datafield><datafield tag="050" ind1=" " ind2="0"><subfield code="a">QK1-989</subfield></datafield><datafield tag="100" ind1="0" ind2=" "><subfield code="a">Jinqiu Li</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="245" ind1="1" ind2="0"><subfield code="a">Genome-Wide Identification and Expression Analysis of the <i<NRAMP</i< Family Genes in Tea Plant (<i<Camellia sinensis</i<)</subfield></datafield><datafield tag="264" ind1=" " ind2="1"><subfield code="c">2021</subfield></datafield><datafield tag="336" ind1=" " ind2=" "><subfield code="a">Text</subfield><subfield code="b">txt</subfield><subfield code="2">rdacontent</subfield></datafield><datafield tag="337" ind1=" " ind2=" "><subfield code="a">Computermedien</subfield><subfield code="b">c</subfield><subfield code="2">rdamedia</subfield></datafield><datafield tag="338" ind1=" " ind2=" "><subfield code="a">Online-Ressource</subfield><subfield code="b">cr</subfield><subfield code="2">rdacarrier</subfield></datafield><datafield tag="520" ind1=" " ind2=" "><subfield code="a">The natural resistant-associated macrophage protein (NRAMP) is a kind of integral membrane transporter which could function on a wide range of divalent metal ions in plants. Little is known about the NRAMP family in <i<Camellia sinensis</i<. In this study, 11 <i<NRAMP</i< genes were identified from the tea plant genome. Phylogenetic analysis showed that the 11 CsNRAMP proteins were split into two groups. The proteins of group 1 contained the conserved motif 6 (GQSSTxTG), while most proteins in group 2 (excepting CsNRAMP7 and CsNRAMP10) contained the conserved residues of motif 6 and motif 2 (GQFIMxGFLxLxxKKW). The number of amino acids in coding regions of 11 <i<CsNRAMP</i< genes ranged from 279–1373, and they contained 3–12 transmembrane domains. Quantitative RT-PCR analysis showed that G1 genes, <i<CsNRAMP3</i<, <i<CsNRAMP4</i<, and <i<CsNRAMP5</i<, were extraordinarily expressed in roots, while G2 genes showed higher expression levels in the stems and leaves. The expression levels of <i<CsNRAMPs</i< in roots and leaves were detected to assess their responses to Pb treatment. The results indicated that <i<CsNRAMPs</i< were differentially regulated, and they might play a role in Pb transportation of tea plant. Subcellular localization assay demonstrated that CsNRAMP2 and CsNRAMP5 fused proteins were localized in the plasma membrane. Overall, this systematic analysis of the <i<CsNRAMP</i< family could provide primary information for further studies on the functional roles of <i<CsNRAMP</i<<i<s</i< in divalent metal transportation in tea plants.</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a"><i<Camellia sinensis</i<</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a"><i<NRAMP</i<</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Pb treatment</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">gene expression</subfield></datafield><datafield tag="653" ind1=" " ind2="0"><subfield code="a">Botany</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Yu Duan</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Zhaolan Han</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Xiaowen Shang</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Kexin Zhang</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Zhongwei Zou</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Yuanchun Ma</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Fang Li</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Wanping Fang</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Xujun Zhu</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="773" ind1="0" ind2="8"><subfield code="i">In</subfield><subfield code="t">Plants</subfield><subfield code="d">MDPI AG, 2013</subfield><subfield code="g">10(2021), 6, p 1055</subfield><subfield code="w">(DE-627)737288345</subfield><subfield code="w">(DE-600)2704341-1</subfield><subfield code="x">22237747</subfield><subfield code="7">nnns</subfield></datafield><datafield tag="773" ind1="1" ind2="8"><subfield code="g">volume:10</subfield><subfield code="g">year:2021</subfield><subfield code="g">number:6, p 1055</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://doi.org/10.3390/plants10061055</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://doaj.org/article/146ab61128a64314b661c34dc0a06a6b</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://www.mdpi.com/2223-7747/10/6/1055</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="2"><subfield code="u">https://doaj.org/toc/2223-7747</subfield><subfield code="y">Journal toc</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_USEFLAG_A</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">SYSFLAG_A</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_DOAJ</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_20</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_22</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_23</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_24</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_39</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_40</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_60</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_62</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_63</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_65</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_69</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_70</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_73</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_95</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_105</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_110</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_151</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_161</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_213</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_230</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_285</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_293</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_602</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_2014</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4012</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4037</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4112</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4125</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4126</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4249</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4305</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4306</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4307</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4313</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4322</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4323</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4324</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4325</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4338</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4367</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4700</subfield></datafield><datafield tag="951" ind1=" " ind2=" "><subfield code="a">AR</subfield></datafield><datafield tag="952" ind1=" " ind2=" "><subfield code="d">10</subfield><subfield code="j">2021</subfield><subfield code="e">6, p 1055</subfield></datafield></record></collection>
|
score |
7.399131 |