Noise–Seeded Developmental Pattern Formation in Filamentous Cyanobacteria

Under nitrogen-poor conditions, multicellular cyanobacteria such as <i<Anabaena</i< sp. PCC 7120 undergo a process of differentiation, forming nearly regular, developmental patterns of individual nitrogen-fixing cells, called heterocysts, interspersed between intervals of vegetative cell...
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Autor*in:	Rinat Arbel-Goren [verfasserIn] Francesca Di Patti [verfasserIn] Duccio Fanelli [verfasserIn] Joel Stavans [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2018

Schlagwörter:	filamentous cyanobacteria developmental pattern formation demographic noise stochastic Turing patterns

Übergeordnetes Werk:	In: Life - MDPI AG, 2012, 8(2018), 4, p 58
Übergeordnetes Werk:	volume:8 ; year:2018 ; number:4, p 58

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3390/life8040058

Katalog-ID:	DOAJ025705423

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language	English
source	In Life 8(2018), 4, p 58 volume:8 year:2018 number:4, p 58
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topic_facet	filamentous cyanobacteria developmental pattern formation demographic noise stochastic Turing patterns Science Q
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authorswithroles_txt_mv	Rinat Arbel-Goren @@aut@@ Francesca Di Patti @@aut@@ Duccio Fanelli @@aut@@ Joel Stavans @@aut@@
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author	Rinat Arbel-Goren
spellingShingle	Rinat Arbel-Goren misc filamentous cyanobacteria misc developmental pattern formation misc demographic noise misc stochastic Turing patterns misc Science misc Q Noise–Seeded Developmental Pattern Formation in Filamentous Cyanobacteria
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topic_title	Noise–Seeded Developmental Pattern Formation in Filamentous Cyanobacteria filamentous cyanobacteria developmental pattern formation demographic noise stochastic Turing patterns
topic	misc filamentous cyanobacteria misc developmental pattern formation misc demographic noise misc stochastic Turing patterns misc Science misc Q
topic_unstemmed	misc filamentous cyanobacteria misc developmental pattern formation misc demographic noise misc stochastic Turing patterns misc Science misc Q
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title	Noise–Seeded Developmental Pattern Formation in Filamentous Cyanobacteria
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title_full	Noise–Seeded Developmental Pattern Formation in Filamentous Cyanobacteria
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title_sort	noise–seeded developmental pattern formation in filamentous cyanobacteria
title_auth	Noise–Seeded Developmental Pattern Formation in Filamentous Cyanobacteria
abstract	Under nitrogen-poor conditions, multicellular cyanobacteria such as <i<Anabaena</i< sp. PCC 7120 undergo a process of differentiation, forming nearly regular, developmental patterns of individual nitrogen-fixing cells, called heterocysts, interspersed between intervals of vegetative cells that carry out photosynthesis. Developmental pattern formation is mediated by morphogen species that can act as activators and inhibitors, some of which can diffuse along filaments. We survey the limitations of the classical, deterministic Turing mechanism that has been often invoked to explain pattern formation in these systems, and then, focusing on a simpler system governed by birth-death processes, we illustrate pedagogically a recently proposed paradigm that provides a much more robust description of pattern formation: stochastic Turing patterns. We emphasize the essential role that cell-to-cell differences in molecular numbers—caused by inevitable fluctuations in gene expression—play, the so called demographic noise, in seeding the formation of stochastic Turing patterns over a much larger region of parameter space, compared to their deterministic counterparts.
abstractGer	Under nitrogen-poor conditions, multicellular cyanobacteria such as <i<Anabaena</i< sp. PCC 7120 undergo a process of differentiation, forming nearly regular, developmental patterns of individual nitrogen-fixing cells, called heterocysts, interspersed between intervals of vegetative cells that carry out photosynthesis. Developmental pattern formation is mediated by morphogen species that can act as activators and inhibitors, some of which can diffuse along filaments. We survey the limitations of the classical, deterministic Turing mechanism that has been often invoked to explain pattern formation in these systems, and then, focusing on a simpler system governed by birth-death processes, we illustrate pedagogically a recently proposed paradigm that provides a much more robust description of pattern formation: stochastic Turing patterns. We emphasize the essential role that cell-to-cell differences in molecular numbers—caused by inevitable fluctuations in gene expression—play, the so called demographic noise, in seeding the formation of stochastic Turing patterns over a much larger region of parameter space, compared to their deterministic counterparts.
abstract_unstemmed	Under nitrogen-poor conditions, multicellular cyanobacteria such as <i<Anabaena</i< sp. PCC 7120 undergo a process of differentiation, forming nearly regular, developmental patterns of individual nitrogen-fixing cells, called heterocysts, interspersed between intervals of vegetative cells that carry out photosynthesis. Developmental pattern formation is mediated by morphogen species that can act as activators and inhibitors, some of which can diffuse along filaments. We survey the limitations of the classical, deterministic Turing mechanism that has been often invoked to explain pattern formation in these systems, and then, focusing on a simpler system governed by birth-death processes, we illustrate pedagogically a recently proposed paradigm that provides a much more robust description of pattern formation: stochastic Turing patterns. We emphasize the essential role that cell-to-cell differences in molecular numbers—caused by inevitable fluctuations in gene expression—play, the so called demographic noise, in seeding the formation of stochastic Turing patterns over a much larger region of parameter space, compared to their deterministic counterparts.
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title_short	Noise–Seeded Developmental Pattern Formation in Filamentous Cyanobacteria
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Noise–Seeded Developmental Pattern Formation in Filamentous Cyanobacteria

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