Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study
Summary: Background: Most children and adolescents infected with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain asymptomatic or develop a mild coronavirus disease 2019 (COVID-19) that usually does not require medical intervention. However, a small proportion of pediatric pa...
Ausführliche Beschreibung
Autor*in: |
Veronica Davalos [verfasserIn] Carlos A. García-Prieto [verfasserIn] Gerardo Ferrer [verfasserIn] Sergio Aguilera-Albesa [verfasserIn] Juan Valencia-Ramos [verfasserIn] Agustí Rodríguez-Palmero [verfasserIn] Montserrat Ruiz [verfasserIn] Laura Planas-Serra [verfasserIn] Iolanda Jordan [verfasserIn] Iosune Alegría [verfasserIn] Patricia Flores-Pérez [verfasserIn] Verónica Cantarín [verfasserIn] Victoria Fumadó [verfasserIn] Maria Teresa Viadero [verfasserIn] Carlos Rodrigo [verfasserIn] Maria Méndez-Hernández [verfasserIn] Eduardo López-Granados [verfasserIn] Roger Colobran [verfasserIn] Jacques G. Rivière [verfasserIn] Pere Soler-Palacín [verfasserIn] Aurora Pujol [verfasserIn] Manel Esteller [verfasserIn] |
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E-Artikel |
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Sprache: |
Englisch |
Erschienen: |
2022 |
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Übergeordnetes Werk: |
In: EClinicalMedicine - Elsevier, 2018, 50(2022), Seite 101515- |
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Übergeordnetes Werk: |
volume:50 ; year:2022 ; pages:101515- |
Links: |
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DOI / URN: |
10.1016/j.eclinm.2022.101515 |
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Katalog-ID: |
DOAJ028410920 |
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245 | 1 | 0 | |a Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study |
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520 | |a Summary: Background: Most children and adolescents infected with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain asymptomatic or develop a mild coronavirus disease 2019 (COVID-19) that usually does not require medical intervention. However, a small proportion of pediatric patients develop a severe clinical condition, multisystem inflammatory syndrome in children (MIS-C). The involvement of epigenetics in the control of the immune response and viral activity prompted us to carry out an epigenomic study to uncover target loci regulated by DNA methylation that could be altered upon the appearance of MIS-C. Methods: Peripheral blood samples were recruited from 43 confirmed MIS-C patients. 69 non-COVID-19 pediatric samples and 15 COVID-19 pediatric samples without MIS-C were used as controls. The cases in the two groups were mixed and divided into discovery (MIS-C = 29 and non-MIS-C = 56) and validation (MIS-C = 14 and non-MIS-C = 28) cohorts, and balanced for age, gender and ethnic background. We interrogated 850,000 CpG sites of the human genome for DNA methylation variants. Findings: The DNA methylation content of 33 CpG loci was linked with the presence of MIS-C. Of these sites, 18 (54.5%) were located in described genes. The top candidate gene was the immune T-cell mediator ZEB2; and others highly ranked candidates included the regulator of natural killer cell functional competence SH2D1B; VWA8, which contains a domain of the Von Willebrand factor A involved in the pediatric hemostasis disease; and human leukocyte antigen complex member HLA-DRB1; in addition to pro-inflammatory genes such as CUL2 and AIM2. The identified loci were used to construct a DNA methylation profile (EPIMISC) that was associated with MIS-C in both cohorts. The EPIMISC signature was also overrepresented in Kawasaki disease patients, a childhood pathology with a possible viral trigger, that shares many of the clinical features of MIS-C. Interpretation: We have characterized DNA methylation loci that are associated with MIS-C diagnosis. The identified genes are likely contributors to the characteristic exaggerated host inflammatory response observed in these patients. The described epigenetic signature could also provide new targets for more specific therapies for the disorder. Funding: Unstoppable campaign of Josep Carreras Leukaemia Foundation, Fundació La Marató de TV3, Cellex Foundation and CERCA Programme/Generalitat de Catalunya. | ||
650 | 4 | |a Multisystem inflammatory syndrome in children | |
650 | 4 | |a COVID-19 | |
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700 | 0 | |a Carlos A. García-Prieto |e verfasserin |4 aut | |
700 | 0 | |a Gerardo Ferrer |e verfasserin |4 aut | |
700 | 0 | |a Sergio Aguilera-Albesa |e verfasserin |4 aut | |
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700 | 0 | |a Agustí Rodríguez-Palmero |e verfasserin |4 aut | |
700 | 0 | |a Montserrat Ruiz |e verfasserin |4 aut | |
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700 | 0 | |a Iolanda Jordan |e verfasserin |4 aut | |
700 | 0 | |a Iosune Alegría |e verfasserin |4 aut | |
700 | 0 | |a Patricia Flores-Pérez |e verfasserin |4 aut | |
700 | 0 | |a Verónica Cantarín |e verfasserin |4 aut | |
700 | 0 | |a Victoria Fumadó |e verfasserin |4 aut | |
700 | 0 | |a Maria Teresa Viadero |e verfasserin |4 aut | |
700 | 0 | |a Carlos Rodrigo |e verfasserin |4 aut | |
700 | 0 | |a Maria Méndez-Hernández |e verfasserin |4 aut | |
700 | 0 | |a Eduardo López-Granados |e verfasserin |4 aut | |
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700 | 0 | |a Jacques G. Rivière |e verfasserin |4 aut | |
700 | 0 | |a Pere Soler-Palacín |e verfasserin |4 aut | |
700 | 0 | |a Aurora Pujol |e verfasserin |4 aut | |
700 | 0 | |a Manel Esteller |e verfasserin |4 aut | |
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10.1016/j.eclinm.2022.101515 doi (DE-627)DOAJ028410920 (DE-599)DOAJb8cdc26448bc40908a1cbea5121585aa DE-627 ger DE-627 rakwb eng R5-920 Veronica Davalos verfasserin aut Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Summary: Background: Most children and adolescents infected with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain asymptomatic or develop a mild coronavirus disease 2019 (COVID-19) that usually does not require medical intervention. However, a small proportion of pediatric patients develop a severe clinical condition, multisystem inflammatory syndrome in children (MIS-C). The involvement of epigenetics in the control of the immune response and viral activity prompted us to carry out an epigenomic study to uncover target loci regulated by DNA methylation that could be altered upon the appearance of MIS-C. Methods: Peripheral blood samples were recruited from 43 confirmed MIS-C patients. 69 non-COVID-19 pediatric samples and 15 COVID-19 pediatric samples without MIS-C were used as controls. The cases in the two groups were mixed and divided into discovery (MIS-C = 29 and non-MIS-C = 56) and validation (MIS-C = 14 and non-MIS-C = 28) cohorts, and balanced for age, gender and ethnic background. We interrogated 850,000 CpG sites of the human genome for DNA methylation variants. Findings: The DNA methylation content of 33 CpG loci was linked with the presence of MIS-C. Of these sites, 18 (54.5%) were located in described genes. The top candidate gene was the immune T-cell mediator ZEB2; and others highly ranked candidates included the regulator of natural killer cell functional competence SH2D1B; VWA8, which contains a domain of the Von Willebrand factor A involved in the pediatric hemostasis disease; and human leukocyte antigen complex member HLA-DRB1; in addition to pro-inflammatory genes such as CUL2 and AIM2. The identified loci were used to construct a DNA methylation profile (EPIMISC) that was associated with MIS-C in both cohorts. The EPIMISC signature was also overrepresented in Kawasaki disease patients, a childhood pathology with a possible viral trigger, that shares many of the clinical features of MIS-C. Interpretation: We have characterized DNA methylation loci that are associated with MIS-C diagnosis. The identified genes are likely contributors to the characteristic exaggerated host inflammatory response observed in these patients. The described epigenetic signature could also provide new targets for more specific therapies for the disorder. Funding: Unstoppable campaign of Josep Carreras Leukaemia Foundation, Fundació La Marató de TV3, Cellex Foundation and CERCA Programme/Generalitat de Catalunya. Multisystem inflammatory syndrome in children COVID-19 Kawasaki disease Epigenetics DNA methylation Medicine (General) Carlos A. García-Prieto verfasserin aut Gerardo Ferrer verfasserin aut Sergio Aguilera-Albesa verfasserin aut Juan Valencia-Ramos verfasserin aut Agustí Rodríguez-Palmero verfasserin aut Montserrat Ruiz verfasserin aut Laura Planas-Serra verfasserin aut Iolanda Jordan verfasserin aut Iosune Alegría verfasserin aut Patricia Flores-Pérez verfasserin aut Verónica Cantarín verfasserin aut Victoria Fumadó verfasserin aut Maria Teresa Viadero verfasserin aut Carlos Rodrigo verfasserin aut Maria Méndez-Hernández verfasserin aut Eduardo López-Granados verfasserin aut Roger Colobran verfasserin aut Jacques G. Rivière verfasserin aut Pere Soler-Palacín verfasserin aut Aurora Pujol verfasserin aut Manel Esteller verfasserin aut In EClinicalMedicine Elsevier, 2018 50(2022), Seite 101515- (DE-627)1035271834 25895370 nnns volume:50 year:2022 pages:101515- https://doi.org/10.1016/j.eclinm.2022.101515 kostenfrei https://doaj.org/article/b8cdc26448bc40908a1cbea5121585aa kostenfrei http://www.sciencedirect.com/science/article/pii/S2589537022002450 kostenfrei https://doaj.org/toc/2589-5370 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2110 GBV_ILN_2112 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4393 GBV_ILN_4700 AR 50 2022 101515- |
spelling |
10.1016/j.eclinm.2022.101515 doi (DE-627)DOAJ028410920 (DE-599)DOAJb8cdc26448bc40908a1cbea5121585aa DE-627 ger DE-627 rakwb eng R5-920 Veronica Davalos verfasserin aut Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Summary: Background: Most children and adolescents infected with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain asymptomatic or develop a mild coronavirus disease 2019 (COVID-19) that usually does not require medical intervention. However, a small proportion of pediatric patients develop a severe clinical condition, multisystem inflammatory syndrome in children (MIS-C). The involvement of epigenetics in the control of the immune response and viral activity prompted us to carry out an epigenomic study to uncover target loci regulated by DNA methylation that could be altered upon the appearance of MIS-C. Methods: Peripheral blood samples were recruited from 43 confirmed MIS-C patients. 69 non-COVID-19 pediatric samples and 15 COVID-19 pediatric samples without MIS-C were used as controls. The cases in the two groups were mixed and divided into discovery (MIS-C = 29 and non-MIS-C = 56) and validation (MIS-C = 14 and non-MIS-C = 28) cohorts, and balanced for age, gender and ethnic background. We interrogated 850,000 CpG sites of the human genome for DNA methylation variants. Findings: The DNA methylation content of 33 CpG loci was linked with the presence of MIS-C. Of these sites, 18 (54.5%) were located in described genes. The top candidate gene was the immune T-cell mediator ZEB2; and others highly ranked candidates included the regulator of natural killer cell functional competence SH2D1B; VWA8, which contains a domain of the Von Willebrand factor A involved in the pediatric hemostasis disease; and human leukocyte antigen complex member HLA-DRB1; in addition to pro-inflammatory genes such as CUL2 and AIM2. The identified loci were used to construct a DNA methylation profile (EPIMISC) that was associated with MIS-C in both cohorts. The EPIMISC signature was also overrepresented in Kawasaki disease patients, a childhood pathology with a possible viral trigger, that shares many of the clinical features of MIS-C. Interpretation: We have characterized DNA methylation loci that are associated with MIS-C diagnosis. The identified genes are likely contributors to the characteristic exaggerated host inflammatory response observed in these patients. The described epigenetic signature could also provide new targets for more specific therapies for the disorder. Funding: Unstoppable campaign of Josep Carreras Leukaemia Foundation, Fundació La Marató de TV3, Cellex Foundation and CERCA Programme/Generalitat de Catalunya. Multisystem inflammatory syndrome in children COVID-19 Kawasaki disease Epigenetics DNA methylation Medicine (General) Carlos A. García-Prieto verfasserin aut Gerardo Ferrer verfasserin aut Sergio Aguilera-Albesa verfasserin aut Juan Valencia-Ramos verfasserin aut Agustí Rodríguez-Palmero verfasserin aut Montserrat Ruiz verfasserin aut Laura Planas-Serra verfasserin aut Iolanda Jordan verfasserin aut Iosune Alegría verfasserin aut Patricia Flores-Pérez verfasserin aut Verónica Cantarín verfasserin aut Victoria Fumadó verfasserin aut Maria Teresa Viadero verfasserin aut Carlos Rodrigo verfasserin aut Maria Méndez-Hernández verfasserin aut Eduardo López-Granados verfasserin aut Roger Colobran verfasserin aut Jacques G. Rivière verfasserin aut Pere Soler-Palacín verfasserin aut Aurora Pujol verfasserin aut Manel Esteller verfasserin aut In EClinicalMedicine Elsevier, 2018 50(2022), Seite 101515- (DE-627)1035271834 25895370 nnns volume:50 year:2022 pages:101515- https://doi.org/10.1016/j.eclinm.2022.101515 kostenfrei https://doaj.org/article/b8cdc26448bc40908a1cbea5121585aa kostenfrei http://www.sciencedirect.com/science/article/pii/S2589537022002450 kostenfrei https://doaj.org/toc/2589-5370 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2110 GBV_ILN_2112 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4393 GBV_ILN_4700 AR 50 2022 101515- |
allfields_unstemmed |
10.1016/j.eclinm.2022.101515 doi (DE-627)DOAJ028410920 (DE-599)DOAJb8cdc26448bc40908a1cbea5121585aa DE-627 ger DE-627 rakwb eng R5-920 Veronica Davalos verfasserin aut Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Summary: Background: Most children and adolescents infected with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain asymptomatic or develop a mild coronavirus disease 2019 (COVID-19) that usually does not require medical intervention. However, a small proportion of pediatric patients develop a severe clinical condition, multisystem inflammatory syndrome in children (MIS-C). The involvement of epigenetics in the control of the immune response and viral activity prompted us to carry out an epigenomic study to uncover target loci regulated by DNA methylation that could be altered upon the appearance of MIS-C. Methods: Peripheral blood samples were recruited from 43 confirmed MIS-C patients. 69 non-COVID-19 pediatric samples and 15 COVID-19 pediatric samples without MIS-C were used as controls. The cases in the two groups were mixed and divided into discovery (MIS-C = 29 and non-MIS-C = 56) and validation (MIS-C = 14 and non-MIS-C = 28) cohorts, and balanced for age, gender and ethnic background. We interrogated 850,000 CpG sites of the human genome for DNA methylation variants. Findings: The DNA methylation content of 33 CpG loci was linked with the presence of MIS-C. Of these sites, 18 (54.5%) were located in described genes. The top candidate gene was the immune T-cell mediator ZEB2; and others highly ranked candidates included the regulator of natural killer cell functional competence SH2D1B; VWA8, which contains a domain of the Von Willebrand factor A involved in the pediatric hemostasis disease; and human leukocyte antigen complex member HLA-DRB1; in addition to pro-inflammatory genes such as CUL2 and AIM2. The identified loci were used to construct a DNA methylation profile (EPIMISC) that was associated with MIS-C in both cohorts. The EPIMISC signature was also overrepresented in Kawasaki disease patients, a childhood pathology with a possible viral trigger, that shares many of the clinical features of MIS-C. Interpretation: We have characterized DNA methylation loci that are associated with MIS-C diagnosis. The identified genes are likely contributors to the characteristic exaggerated host inflammatory response observed in these patients. The described epigenetic signature could also provide new targets for more specific therapies for the disorder. Funding: Unstoppable campaign of Josep Carreras Leukaemia Foundation, Fundació La Marató de TV3, Cellex Foundation and CERCA Programme/Generalitat de Catalunya. Multisystem inflammatory syndrome in children COVID-19 Kawasaki disease Epigenetics DNA methylation Medicine (General) Carlos A. García-Prieto verfasserin aut Gerardo Ferrer verfasserin aut Sergio Aguilera-Albesa verfasserin aut Juan Valencia-Ramos verfasserin aut Agustí Rodríguez-Palmero verfasserin aut Montserrat Ruiz verfasserin aut Laura Planas-Serra verfasserin aut Iolanda Jordan verfasserin aut Iosune Alegría verfasserin aut Patricia Flores-Pérez verfasserin aut Verónica Cantarín verfasserin aut Victoria Fumadó verfasserin aut Maria Teresa Viadero verfasserin aut Carlos Rodrigo verfasserin aut Maria Méndez-Hernández verfasserin aut Eduardo López-Granados verfasserin aut Roger Colobran verfasserin aut Jacques G. Rivière verfasserin aut Pere Soler-Palacín verfasserin aut Aurora Pujol verfasserin aut Manel Esteller verfasserin aut In EClinicalMedicine Elsevier, 2018 50(2022), Seite 101515- (DE-627)1035271834 25895370 nnns volume:50 year:2022 pages:101515- https://doi.org/10.1016/j.eclinm.2022.101515 kostenfrei https://doaj.org/article/b8cdc26448bc40908a1cbea5121585aa kostenfrei http://www.sciencedirect.com/science/article/pii/S2589537022002450 kostenfrei https://doaj.org/toc/2589-5370 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2110 GBV_ILN_2112 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4393 GBV_ILN_4700 AR 50 2022 101515- |
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10.1016/j.eclinm.2022.101515 doi (DE-627)DOAJ028410920 (DE-599)DOAJb8cdc26448bc40908a1cbea5121585aa DE-627 ger DE-627 rakwb eng R5-920 Veronica Davalos verfasserin aut Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Summary: Background: Most children and adolescents infected with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain asymptomatic or develop a mild coronavirus disease 2019 (COVID-19) that usually does not require medical intervention. However, a small proportion of pediatric patients develop a severe clinical condition, multisystem inflammatory syndrome in children (MIS-C). The involvement of epigenetics in the control of the immune response and viral activity prompted us to carry out an epigenomic study to uncover target loci regulated by DNA methylation that could be altered upon the appearance of MIS-C. Methods: Peripheral blood samples were recruited from 43 confirmed MIS-C patients. 69 non-COVID-19 pediatric samples and 15 COVID-19 pediatric samples without MIS-C were used as controls. The cases in the two groups were mixed and divided into discovery (MIS-C = 29 and non-MIS-C = 56) and validation (MIS-C = 14 and non-MIS-C = 28) cohorts, and balanced for age, gender and ethnic background. We interrogated 850,000 CpG sites of the human genome for DNA methylation variants. Findings: The DNA methylation content of 33 CpG loci was linked with the presence of MIS-C. Of these sites, 18 (54.5%) were located in described genes. The top candidate gene was the immune T-cell mediator ZEB2; and others highly ranked candidates included the regulator of natural killer cell functional competence SH2D1B; VWA8, which contains a domain of the Von Willebrand factor A involved in the pediatric hemostasis disease; and human leukocyte antigen complex member HLA-DRB1; in addition to pro-inflammatory genes such as CUL2 and AIM2. The identified loci were used to construct a DNA methylation profile (EPIMISC) that was associated with MIS-C in both cohorts. The EPIMISC signature was also overrepresented in Kawasaki disease patients, a childhood pathology with a possible viral trigger, that shares many of the clinical features of MIS-C. Interpretation: We have characterized DNA methylation loci that are associated with MIS-C diagnosis. The identified genes are likely contributors to the characteristic exaggerated host inflammatory response observed in these patients. The described epigenetic signature could also provide new targets for more specific therapies for the disorder. Funding: Unstoppable campaign of Josep Carreras Leukaemia Foundation, Fundació La Marató de TV3, Cellex Foundation and CERCA Programme/Generalitat de Catalunya. Multisystem inflammatory syndrome in children COVID-19 Kawasaki disease Epigenetics DNA methylation Medicine (General) Carlos A. García-Prieto verfasserin aut Gerardo Ferrer verfasserin aut Sergio Aguilera-Albesa verfasserin aut Juan Valencia-Ramos verfasserin aut Agustí Rodríguez-Palmero verfasserin aut Montserrat Ruiz verfasserin aut Laura Planas-Serra verfasserin aut Iolanda Jordan verfasserin aut Iosune Alegría verfasserin aut Patricia Flores-Pérez verfasserin aut Verónica Cantarín verfasserin aut Victoria Fumadó verfasserin aut Maria Teresa Viadero verfasserin aut Carlos Rodrigo verfasserin aut Maria Méndez-Hernández verfasserin aut Eduardo López-Granados verfasserin aut Roger Colobran verfasserin aut Jacques G. Rivière verfasserin aut Pere Soler-Palacín verfasserin aut Aurora Pujol verfasserin aut Manel Esteller verfasserin aut In EClinicalMedicine Elsevier, 2018 50(2022), Seite 101515- (DE-627)1035271834 25895370 nnns volume:50 year:2022 pages:101515- https://doi.org/10.1016/j.eclinm.2022.101515 kostenfrei https://doaj.org/article/b8cdc26448bc40908a1cbea5121585aa kostenfrei http://www.sciencedirect.com/science/article/pii/S2589537022002450 kostenfrei https://doaj.org/toc/2589-5370 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2110 GBV_ILN_2112 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4393 GBV_ILN_4700 AR 50 2022 101515- |
allfieldsSound |
10.1016/j.eclinm.2022.101515 doi (DE-627)DOAJ028410920 (DE-599)DOAJb8cdc26448bc40908a1cbea5121585aa DE-627 ger DE-627 rakwb eng R5-920 Veronica Davalos verfasserin aut Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Summary: Background: Most children and adolescents infected with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain asymptomatic or develop a mild coronavirus disease 2019 (COVID-19) that usually does not require medical intervention. However, a small proportion of pediatric patients develop a severe clinical condition, multisystem inflammatory syndrome in children (MIS-C). The involvement of epigenetics in the control of the immune response and viral activity prompted us to carry out an epigenomic study to uncover target loci regulated by DNA methylation that could be altered upon the appearance of MIS-C. Methods: Peripheral blood samples were recruited from 43 confirmed MIS-C patients. 69 non-COVID-19 pediatric samples and 15 COVID-19 pediatric samples without MIS-C were used as controls. The cases in the two groups were mixed and divided into discovery (MIS-C = 29 and non-MIS-C = 56) and validation (MIS-C = 14 and non-MIS-C = 28) cohorts, and balanced for age, gender and ethnic background. We interrogated 850,000 CpG sites of the human genome for DNA methylation variants. Findings: The DNA methylation content of 33 CpG loci was linked with the presence of MIS-C. Of these sites, 18 (54.5%) were located in described genes. The top candidate gene was the immune T-cell mediator ZEB2; and others highly ranked candidates included the regulator of natural killer cell functional competence SH2D1B; VWA8, which contains a domain of the Von Willebrand factor A involved in the pediatric hemostasis disease; and human leukocyte antigen complex member HLA-DRB1; in addition to pro-inflammatory genes such as CUL2 and AIM2. The identified loci were used to construct a DNA methylation profile (EPIMISC) that was associated with MIS-C in both cohorts. The EPIMISC signature was also overrepresented in Kawasaki disease patients, a childhood pathology with a possible viral trigger, that shares many of the clinical features of MIS-C. Interpretation: We have characterized DNA methylation loci that are associated with MIS-C diagnosis. The identified genes are likely contributors to the characteristic exaggerated host inflammatory response observed in these patients. The described epigenetic signature could also provide new targets for more specific therapies for the disorder. Funding: Unstoppable campaign of Josep Carreras Leukaemia Foundation, Fundació La Marató de TV3, Cellex Foundation and CERCA Programme/Generalitat de Catalunya. Multisystem inflammatory syndrome in children COVID-19 Kawasaki disease Epigenetics DNA methylation Medicine (General) Carlos A. García-Prieto verfasserin aut Gerardo Ferrer verfasserin aut Sergio Aguilera-Albesa verfasserin aut Juan Valencia-Ramos verfasserin aut Agustí Rodríguez-Palmero verfasserin aut Montserrat Ruiz verfasserin aut Laura Planas-Serra verfasserin aut Iolanda Jordan verfasserin aut Iosune Alegría verfasserin aut Patricia Flores-Pérez verfasserin aut Verónica Cantarín verfasserin aut Victoria Fumadó verfasserin aut Maria Teresa Viadero verfasserin aut Carlos Rodrigo verfasserin aut Maria Méndez-Hernández verfasserin aut Eduardo López-Granados verfasserin aut Roger Colobran verfasserin aut Jacques G. Rivière verfasserin aut Pere Soler-Palacín verfasserin aut Aurora Pujol verfasserin aut Manel Esteller verfasserin aut In EClinicalMedicine Elsevier, 2018 50(2022), Seite 101515- (DE-627)1035271834 25895370 nnns volume:50 year:2022 pages:101515- https://doi.org/10.1016/j.eclinm.2022.101515 kostenfrei https://doaj.org/article/b8cdc26448bc40908a1cbea5121585aa kostenfrei http://www.sciencedirect.com/science/article/pii/S2589537022002450 kostenfrei https://doaj.org/toc/2589-5370 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2110 GBV_ILN_2112 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4393 GBV_ILN_4700 AR 50 2022 101515- |
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Veronica Davalos @@aut@@ Carlos A. García-Prieto @@aut@@ Gerardo Ferrer @@aut@@ Sergio Aguilera-Albesa @@aut@@ Juan Valencia-Ramos @@aut@@ Agustí Rodríguez-Palmero @@aut@@ Montserrat Ruiz @@aut@@ Laura Planas-Serra @@aut@@ Iolanda Jordan @@aut@@ Iosune Alegría @@aut@@ Patricia Flores-Pérez @@aut@@ Verónica Cantarín @@aut@@ Victoria Fumadó @@aut@@ Maria Teresa Viadero @@aut@@ Carlos Rodrigo @@aut@@ Maria Méndez-Hernández @@aut@@ Eduardo López-Granados @@aut@@ Roger Colobran @@aut@@ Jacques G. Rivière @@aut@@ Pere Soler-Palacín @@aut@@ Aurora Pujol @@aut@@ Manel Esteller @@aut@@ |
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Veronica Davalos |
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Veronica Davalos misc R5-920 misc Multisystem inflammatory syndrome in children misc COVID-19 misc Kawasaki disease misc Epigenetics misc DNA methylation misc Medicine (General) Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study |
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R5-920 Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study Multisystem inflammatory syndrome in children COVID-19 Kawasaki disease Epigenetics DNA methylation |
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Veronica Davalos Carlos A. García-Prieto Gerardo Ferrer Sergio Aguilera-Albesa Juan Valencia-Ramos Agustí Rodríguez-Palmero Montserrat Ruiz Laura Planas-Serra Iolanda Jordan Iosune Alegría Patricia Flores-Pérez Verónica Cantarín Victoria Fumadó Maria Teresa Viadero Carlos Rodrigo Maria Méndez-Hernández Eduardo López-Granados Roger Colobran Jacques G. Rivière Pere Soler-Palacín Aurora Pujol Manel Esteller |
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epigenetic profiling linked to multisystem inflammatory syndrome in children (mis-c): a multicenter, retrospective study |
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Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study |
abstract |
Summary: Background: Most children and adolescents infected with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain asymptomatic or develop a mild coronavirus disease 2019 (COVID-19) that usually does not require medical intervention. However, a small proportion of pediatric patients develop a severe clinical condition, multisystem inflammatory syndrome in children (MIS-C). The involvement of epigenetics in the control of the immune response and viral activity prompted us to carry out an epigenomic study to uncover target loci regulated by DNA methylation that could be altered upon the appearance of MIS-C. Methods: Peripheral blood samples were recruited from 43 confirmed MIS-C patients. 69 non-COVID-19 pediatric samples and 15 COVID-19 pediatric samples without MIS-C were used as controls. The cases in the two groups were mixed and divided into discovery (MIS-C = 29 and non-MIS-C = 56) and validation (MIS-C = 14 and non-MIS-C = 28) cohorts, and balanced for age, gender and ethnic background. We interrogated 850,000 CpG sites of the human genome for DNA methylation variants. Findings: The DNA methylation content of 33 CpG loci was linked with the presence of MIS-C. Of these sites, 18 (54.5%) were located in described genes. The top candidate gene was the immune T-cell mediator ZEB2; and others highly ranked candidates included the regulator of natural killer cell functional competence SH2D1B; VWA8, which contains a domain of the Von Willebrand factor A involved in the pediatric hemostasis disease; and human leukocyte antigen complex member HLA-DRB1; in addition to pro-inflammatory genes such as CUL2 and AIM2. The identified loci were used to construct a DNA methylation profile (EPIMISC) that was associated with MIS-C in both cohorts. The EPIMISC signature was also overrepresented in Kawasaki disease patients, a childhood pathology with a possible viral trigger, that shares many of the clinical features of MIS-C. Interpretation: We have characterized DNA methylation loci that are associated with MIS-C diagnosis. The identified genes are likely contributors to the characteristic exaggerated host inflammatory response observed in these patients. The described epigenetic signature could also provide new targets for more specific therapies for the disorder. Funding: Unstoppable campaign of Josep Carreras Leukaemia Foundation, Fundació La Marató de TV3, Cellex Foundation and CERCA Programme/Generalitat de Catalunya. |
abstractGer |
Summary: Background: Most children and adolescents infected with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain asymptomatic or develop a mild coronavirus disease 2019 (COVID-19) that usually does not require medical intervention. However, a small proportion of pediatric patients develop a severe clinical condition, multisystem inflammatory syndrome in children (MIS-C). The involvement of epigenetics in the control of the immune response and viral activity prompted us to carry out an epigenomic study to uncover target loci regulated by DNA methylation that could be altered upon the appearance of MIS-C. Methods: Peripheral blood samples were recruited from 43 confirmed MIS-C patients. 69 non-COVID-19 pediatric samples and 15 COVID-19 pediatric samples without MIS-C were used as controls. The cases in the two groups were mixed and divided into discovery (MIS-C = 29 and non-MIS-C = 56) and validation (MIS-C = 14 and non-MIS-C = 28) cohorts, and balanced for age, gender and ethnic background. We interrogated 850,000 CpG sites of the human genome for DNA methylation variants. Findings: The DNA methylation content of 33 CpG loci was linked with the presence of MIS-C. Of these sites, 18 (54.5%) were located in described genes. The top candidate gene was the immune T-cell mediator ZEB2; and others highly ranked candidates included the regulator of natural killer cell functional competence SH2D1B; VWA8, which contains a domain of the Von Willebrand factor A involved in the pediatric hemostasis disease; and human leukocyte antigen complex member HLA-DRB1; in addition to pro-inflammatory genes such as CUL2 and AIM2. The identified loci were used to construct a DNA methylation profile (EPIMISC) that was associated with MIS-C in both cohorts. The EPIMISC signature was also overrepresented in Kawasaki disease patients, a childhood pathology with a possible viral trigger, that shares many of the clinical features of MIS-C. Interpretation: We have characterized DNA methylation loci that are associated with MIS-C diagnosis. The identified genes are likely contributors to the characteristic exaggerated host inflammatory response observed in these patients. The described epigenetic signature could also provide new targets for more specific therapies for the disorder. Funding: Unstoppable campaign of Josep Carreras Leukaemia Foundation, Fundació La Marató de TV3, Cellex Foundation and CERCA Programme/Generalitat de Catalunya. |
abstract_unstemmed |
Summary: Background: Most children and adolescents infected with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain asymptomatic or develop a mild coronavirus disease 2019 (COVID-19) that usually does not require medical intervention. However, a small proportion of pediatric patients develop a severe clinical condition, multisystem inflammatory syndrome in children (MIS-C). The involvement of epigenetics in the control of the immune response and viral activity prompted us to carry out an epigenomic study to uncover target loci regulated by DNA methylation that could be altered upon the appearance of MIS-C. Methods: Peripheral blood samples were recruited from 43 confirmed MIS-C patients. 69 non-COVID-19 pediatric samples and 15 COVID-19 pediatric samples without MIS-C were used as controls. The cases in the two groups were mixed and divided into discovery (MIS-C = 29 and non-MIS-C = 56) and validation (MIS-C = 14 and non-MIS-C = 28) cohorts, and balanced for age, gender and ethnic background. We interrogated 850,000 CpG sites of the human genome for DNA methylation variants. Findings: The DNA methylation content of 33 CpG loci was linked with the presence of MIS-C. Of these sites, 18 (54.5%) were located in described genes. The top candidate gene was the immune T-cell mediator ZEB2; and others highly ranked candidates included the regulator of natural killer cell functional competence SH2D1B; VWA8, which contains a domain of the Von Willebrand factor A involved in the pediatric hemostasis disease; and human leukocyte antigen complex member HLA-DRB1; in addition to pro-inflammatory genes such as CUL2 and AIM2. The identified loci were used to construct a DNA methylation profile (EPIMISC) that was associated with MIS-C in both cohorts. The EPIMISC signature was also overrepresented in Kawasaki disease patients, a childhood pathology with a possible viral trigger, that shares many of the clinical features of MIS-C. Interpretation: We have characterized DNA methylation loci that are associated with MIS-C diagnosis. The identified genes are likely contributors to the characteristic exaggerated host inflammatory response observed in these patients. The described epigenetic signature could also provide new targets for more specific therapies for the disorder. Funding: Unstoppable campaign of Josep Carreras Leukaemia Foundation, Fundació La Marató de TV3, Cellex Foundation and CERCA Programme/Generalitat de Catalunya. |
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title_short |
Epigenetic profiling linked to multisystem inflammatory syndrome in children (MIS-C): A multicenter, retrospective study |
url |
https://doi.org/10.1016/j.eclinm.2022.101515 https://doaj.org/article/b8cdc26448bc40908a1cbea5121585aa http://www.sciencedirect.com/science/article/pii/S2589537022002450 https://doaj.org/toc/2589-5370 |
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author2 |
Carlos A. García-Prieto Gerardo Ferrer Sergio Aguilera-Albesa Juan Valencia-Ramos Agustí Rodríguez-Palmero Montserrat Ruiz Laura Planas-Serra Iolanda Jordan Iosune Alegría Patricia Flores-Pérez Verónica Cantarín Victoria Fumadó Maria Teresa Viadero Carlos Rodrigo Maria Méndez-Hernández Eduardo López-Granados Roger Colobran Jacques G. Rivière Pere Soler-Palacín Aurora Pujol Manel Esteller |
author2Str |
Carlos A. García-Prieto Gerardo Ferrer Sergio Aguilera-Albesa Juan Valencia-Ramos Agustí Rodríguez-Palmero Montserrat Ruiz Laura Planas-Serra Iolanda Jordan Iosune Alegría Patricia Flores-Pérez Verónica Cantarín Victoria Fumadó Maria Teresa Viadero Carlos Rodrigo Maria Méndez-Hernández Eduardo López-Granados Roger Colobran Jacques G. Rivière Pere Soler-Palacín Aurora Pujol Manel Esteller |
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R - General Medicine |
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10.1016/j.eclinm.2022.101515 |
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up_date |
2024-07-03T17:26:48.129Z |
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