Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica
Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing...
Ausführliche Beschreibung
Autor*in: |
Kunal Jani [verfasserIn] Anoop Mahajan [verfasserIn] Swapnil Kajale [verfasserIn] Aditee Ashar [verfasserIn] Avinash Sharma [verfasserIn] |
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E-Artikel |
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Englisch |
Erschienen: |
2021 |
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Übergeordnetes Werk: |
In: Polish Polar Research - Polish Academy of Sciences, 2007, (2021), No 1, Seite 21-36 |
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Übergeordnetes Werk: |
year:2021 ; number:No 1 ; pages:21-36 |
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Katalog-ID: |
DOAJ034819924 |
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(DE-627)DOAJ034819924 (DE-599)DOAJ7e67e7fe224c4d128c99814ed86efb53 DE-627 ger DE-627 rakwb eng QE1-996.5 Kunal Jani verfasserin aut Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing atmospheric chemistry and ozone depletion. Here, we use high-throughput sequencing to understand the impact of subtle changes in environmental parameters on bacterial communities. We observed dominance of Cyanobacteria (41.93%) followed by Bacteroidetes (14.8%), Acidobacteria (13.35%), Proteobacteria (9.67%), Actinobacteria (7.79%), Firmicutes (3.46%) among all the samples collected every alternate day for 20 days. Additionally, metagenomic imputations revealed higher abundance of gene families associated with DNA repair and carotenoid biosynthesis enabling bacterial communities to resist and function under the high UV radiations. We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions. antarctica uv radiations adaption strategies extreme environments dna repair Geology Anoop Mahajan verfasserin aut Swapnil Kajale verfasserin aut Aditee Ashar verfasserin aut Avinash Sharma verfasserin aut In Polish Polar Research Polish Academy of Sciences, 2007 (2021), No 1, Seite 21-36 (DE-627)521048907 (DE-600)2261592-1 20818262 nnns year:2021 number:No 1 pages:21-36 https://doi.org/10.24425/ppr.2021.138588 kostenfrei https://doaj.org/article/7e67e7fe224c4d128c99814ed86efb53 kostenfrei https://journals.pan.pl/Content/120895/PDF/2022-01-PPR-02-Jani.pdf kostenfrei https://doaj.org/toc/0138-0338 Journal toc kostenfrei https://doaj.org/toc/2081-8262 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 2021 No 1 21-36 |
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(DE-627)DOAJ034819924 (DE-599)DOAJ7e67e7fe224c4d128c99814ed86efb53 DE-627 ger DE-627 rakwb eng QE1-996.5 Kunal Jani verfasserin aut Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing atmospheric chemistry and ozone depletion. Here, we use high-throughput sequencing to understand the impact of subtle changes in environmental parameters on bacterial communities. We observed dominance of Cyanobacteria (41.93%) followed by Bacteroidetes (14.8%), Acidobacteria (13.35%), Proteobacteria (9.67%), Actinobacteria (7.79%), Firmicutes (3.46%) among all the samples collected every alternate day for 20 days. Additionally, metagenomic imputations revealed higher abundance of gene families associated with DNA repair and carotenoid biosynthesis enabling bacterial communities to resist and function under the high UV radiations. We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions. antarctica uv radiations adaption strategies extreme environments dna repair Geology Anoop Mahajan verfasserin aut Swapnil Kajale verfasserin aut Aditee Ashar verfasserin aut Avinash Sharma verfasserin aut In Polish Polar Research Polish Academy of Sciences, 2007 (2021), No 1, Seite 21-36 (DE-627)521048907 (DE-600)2261592-1 20818262 nnns year:2021 number:No 1 pages:21-36 https://doi.org/10.24425/ppr.2021.138588 kostenfrei https://doaj.org/article/7e67e7fe224c4d128c99814ed86efb53 kostenfrei https://journals.pan.pl/Content/120895/PDF/2022-01-PPR-02-Jani.pdf kostenfrei https://doaj.org/toc/0138-0338 Journal toc kostenfrei https://doaj.org/toc/2081-8262 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 2021 No 1 21-36 |
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(DE-627)DOAJ034819924 (DE-599)DOAJ7e67e7fe224c4d128c99814ed86efb53 DE-627 ger DE-627 rakwb eng QE1-996.5 Kunal Jani verfasserin aut Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing atmospheric chemistry and ozone depletion. Here, we use high-throughput sequencing to understand the impact of subtle changes in environmental parameters on bacterial communities. We observed dominance of Cyanobacteria (41.93%) followed by Bacteroidetes (14.8%), Acidobacteria (13.35%), Proteobacteria (9.67%), Actinobacteria (7.79%), Firmicutes (3.46%) among all the samples collected every alternate day for 20 days. Additionally, metagenomic imputations revealed higher abundance of gene families associated with DNA repair and carotenoid biosynthesis enabling bacterial communities to resist and function under the high UV radiations. We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions. antarctica uv radiations adaption strategies extreme environments dna repair Geology Anoop Mahajan verfasserin aut Swapnil Kajale verfasserin aut Aditee Ashar verfasserin aut Avinash Sharma verfasserin aut In Polish Polar Research Polish Academy of Sciences, 2007 (2021), No 1, Seite 21-36 (DE-627)521048907 (DE-600)2261592-1 20818262 nnns year:2021 number:No 1 pages:21-36 https://doi.org/10.24425/ppr.2021.138588 kostenfrei https://doaj.org/article/7e67e7fe224c4d128c99814ed86efb53 kostenfrei https://journals.pan.pl/Content/120895/PDF/2022-01-PPR-02-Jani.pdf kostenfrei https://doaj.org/toc/0138-0338 Journal toc kostenfrei https://doaj.org/toc/2081-8262 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 2021 No 1 21-36 |
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(DE-627)DOAJ034819924 (DE-599)DOAJ7e67e7fe224c4d128c99814ed86efb53 DE-627 ger DE-627 rakwb eng QE1-996.5 Kunal Jani verfasserin aut Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing atmospheric chemistry and ozone depletion. Here, we use high-throughput sequencing to understand the impact of subtle changes in environmental parameters on bacterial communities. We observed dominance of Cyanobacteria (41.93%) followed by Bacteroidetes (14.8%), Acidobacteria (13.35%), Proteobacteria (9.67%), Actinobacteria (7.79%), Firmicutes (3.46%) among all the samples collected every alternate day for 20 days. Additionally, metagenomic imputations revealed higher abundance of gene families associated with DNA repair and carotenoid biosynthesis enabling bacterial communities to resist and function under the high UV radiations. We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions. antarctica uv radiations adaption strategies extreme environments dna repair Geology Anoop Mahajan verfasserin aut Swapnil Kajale verfasserin aut Aditee Ashar verfasserin aut Avinash Sharma verfasserin aut In Polish Polar Research Polish Academy of Sciences, 2007 (2021), No 1, Seite 21-36 (DE-627)521048907 (DE-600)2261592-1 20818262 nnns year:2021 number:No 1 pages:21-36 https://doi.org/10.24425/ppr.2021.138588 kostenfrei https://doaj.org/article/7e67e7fe224c4d128c99814ed86efb53 kostenfrei https://journals.pan.pl/Content/120895/PDF/2022-01-PPR-02-Jani.pdf kostenfrei https://doaj.org/toc/0138-0338 Journal toc kostenfrei https://doaj.org/toc/2081-8262 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 2021 No 1 21-36 |
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(DE-627)DOAJ034819924 (DE-599)DOAJ7e67e7fe224c4d128c99814ed86efb53 DE-627 ger DE-627 rakwb eng QE1-996.5 Kunal Jani verfasserin aut Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing atmospheric chemistry and ozone depletion. Here, we use high-throughput sequencing to understand the impact of subtle changes in environmental parameters on bacterial communities. We observed dominance of Cyanobacteria (41.93%) followed by Bacteroidetes (14.8%), Acidobacteria (13.35%), Proteobacteria (9.67%), Actinobacteria (7.79%), Firmicutes (3.46%) among all the samples collected every alternate day for 20 days. Additionally, metagenomic imputations revealed higher abundance of gene families associated with DNA repair and carotenoid biosynthesis enabling bacterial communities to resist and function under the high UV radiations. We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions. antarctica uv radiations adaption strategies extreme environments dna repair Geology Anoop Mahajan verfasserin aut Swapnil Kajale verfasserin aut Aditee Ashar verfasserin aut Avinash Sharma verfasserin aut In Polish Polar Research Polish Academy of Sciences, 2007 (2021), No 1, Seite 21-36 (DE-627)521048907 (DE-600)2261592-1 20818262 nnns year:2021 number:No 1 pages:21-36 https://doi.org/10.24425/ppr.2021.138588 kostenfrei https://doaj.org/article/7e67e7fe224c4d128c99814ed86efb53 kostenfrei https://journals.pan.pl/Content/120895/PDF/2022-01-PPR-02-Jani.pdf kostenfrei https://doaj.org/toc/0138-0338 Journal toc kostenfrei https://doaj.org/toc/2081-8262 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 2021 No 1 21-36 |
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Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica |
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Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing atmospheric chemistry and ozone depletion. Here, we use high-throughput sequencing to understand the impact of subtle changes in environmental parameters on bacterial communities. We observed dominance of Cyanobacteria (41.93%) followed by Bacteroidetes (14.8%), Acidobacteria (13.35%), Proteobacteria (9.67%), Actinobacteria (7.79%), Firmicutes (3.46%) among all the samples collected every alternate day for 20 days. Additionally, metagenomic imputations revealed higher abundance of gene families associated with DNA repair and carotenoid biosynthesis enabling bacterial communities to resist and function under the high UV radiations. We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions. |
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Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing atmospheric chemistry and ozone depletion. Here, we use high-throughput sequencing to understand the impact of subtle changes in environmental parameters on bacterial communities. We observed dominance of Cyanobacteria (41.93%) followed by Bacteroidetes (14.8%), Acidobacteria (13.35%), Proteobacteria (9.67%), Actinobacteria (7.79%), Firmicutes (3.46%) among all the samples collected every alternate day for 20 days. Additionally, metagenomic imputations revealed higher abundance of gene families associated with DNA repair and carotenoid biosynthesis enabling bacterial communities to resist and function under the high UV radiations. We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions. |
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Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing atmospheric chemistry and ozone depletion. Here, we use high-throughput sequencing to understand the impact of subtle changes in environmental parameters on bacterial communities. We observed dominance of Cyanobacteria (41.93%) followed by Bacteroidetes (14.8%), Acidobacteria (13.35%), Proteobacteria (9.67%), Actinobacteria (7.79%), Firmicutes (3.46%) among all the samples collected every alternate day for 20 days. Additionally, metagenomic imputations revealed higher abundance of gene families associated with DNA repair and carotenoid biosynthesis enabling bacterial communities to resist and function under the high UV radiations. We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions. |
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We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions.</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">antarctica</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">uv radiations</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">adaption strategies</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">extreme environments</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">dna repair</subfield></datafield><datafield tag="653" ind1=" " ind2="0"><subfield code="a">Geology</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Anoop Mahajan</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Swapnil 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