Characterization of the Complete Mitochondrial Genome Sequences of Three Croakers (Perciformes, Sciaenidae) and Novel Insights into the Phylogenetics
The three croakers (Nibea coibor, Protonibea diacanthus and Argyrosomus amoyensis, Perciformes, Sciaenidae) are important commercial species inhabiting the Eastern Indian Ocean and Western Pacific. Molecular data employed in previous research on phylogenetic reconstruction have not been adequate and...
Ausführliche Beschreibung
Gespeichert in:
| Autor*in: |
Huirong Yang [verfasserIn] Jun Xia [verfasserIn] Jia-en Zhang [verfasserIn] Jinzeng Yang [verfasserIn] Huihong Zhao [verfasserIn] Qing Wang [verfasserIn] Jijia Sun [verfasserIn] Huayi Xue [verfasserIn] Yuanyuan Wu [verfasserIn] Jiehu Chen [verfasserIn] Jingchuan Huang [verfasserIn] Li Liu [verfasserIn] |
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| Format: |
E-Artikel |
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| Sprache: |
Englisch |
| Erschienen: |
2018 |
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| Übergeordnetes Werk: |
In: International Journal of Molecular Sciences - MDPI AG, 2003, 19(2018), 6, p 1741 |
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| Übergeordnetes Werk: |
volume:19 ; year:2018 ; number:6, p 1741 |
| Links: |
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| DOI / URN: |
10.3390/ijms19061741 |
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| Katalog-ID: |
DOAJ035845422 |
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| 520 | |a The three croakers (Nibea coibor, Protonibea diacanthus and Argyrosomus amoyensis, Perciformes, Sciaenidae) are important commercial species inhabiting the Eastern Indian Ocean and Western Pacific. Molecular data employed in previous research on phylogenetic reconstruction have not been adequate and complete, and systematic and comprehensive phylogenetic relationships for these fish are unresolved. We sequenced the complete mitochondrial genomes of the three croakers using next-generation sequencing for the first time. We analyzed the composition and phylogenies between 19 species in the family Sciaenidae using the mitochondrial protein coding sequences of 204 species in the Series Eupercaria. We present the characterization of the complete mitochondrial genome sequences of the three croakers. Gene arrangement and distribution of the three croakers are canonically identical and consistent with other vertebrates. We found that the family Sciaenidae is an independent branch that is isolated from the order Perciformes and does not belong to any extant classification. Therefore, this family is expected to belong to a new classification at the order level and needs further analysis. The evolution of Sciaenidae has lagged far behind the Perciformes differentiation. This study presents a novel insight into the phylogenetics of the family Sciaenidae from the order Perciformes and facilitates additional studies on the evolution and phylogeny of Series Eupercaria. | ||
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| 650 | 4 | |a mitochondrial genome | |
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| 700 | 0 | |a Jingchuan Huang |e verfasserin |4 aut | |
| 700 | 0 | |a Li Liu |e verfasserin |4 aut | |
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10.3390/ijms19061741 doi (DE-627)DOAJ035845422 (DE-599)DOAJe6d28d285b8b449188dde81228c7abf8 DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Huirong Yang verfasserin aut Characterization of the Complete Mitochondrial Genome Sequences of Three Croakers (Perciformes, Sciaenidae) and Novel Insights into the Phylogenetics 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The three croakers (Nibea coibor, Protonibea diacanthus and Argyrosomus amoyensis, Perciformes, Sciaenidae) are important commercial species inhabiting the Eastern Indian Ocean and Western Pacific. Molecular data employed in previous research on phylogenetic reconstruction have not been adequate and complete, and systematic and comprehensive phylogenetic relationships for these fish are unresolved. We sequenced the complete mitochondrial genomes of the three croakers using next-generation sequencing for the first time. We analyzed the composition and phylogenies between 19 species in the family Sciaenidae using the mitochondrial protein coding sequences of 204 species in the Series Eupercaria. We present the characterization of the complete mitochondrial genome sequences of the three croakers. Gene arrangement and distribution of the three croakers are canonically identical and consistent with other vertebrates. We found that the family Sciaenidae is an independent branch that is isolated from the order Perciformes and does not belong to any extant classification. Therefore, this family is expected to belong to a new classification at the order level and needs further analysis. The evolution of Sciaenidae has lagged far behind the Perciformes differentiation. This study presents a novel insight into the phylogenetics of the family Sciaenidae from the order Perciformes and facilitates additional studies on the evolution and phylogeny of Series Eupercaria. Nibea coibor Protonibea diacanthus Argyrosomus amoyensis Sciaenidae mitochondrial genome characterization phylogenetic analysis Biology (General) Chemistry Jun Xia verfasserin aut Jia-en Zhang verfasserin aut Jinzeng Yang verfasserin aut Huihong Zhao verfasserin aut Qing Wang verfasserin aut Jijia Sun verfasserin aut Huayi Xue verfasserin aut Yuanyuan Wu verfasserin aut Jiehu Chen verfasserin aut Jingchuan Huang verfasserin aut Li Liu verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 19(2018), 6, p 1741 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:19 year:2018 number:6, p 1741 https://doi.org/10.3390/ijms19061741 kostenfrei https://doaj.org/article/e6d28d285b8b449188dde81228c7abf8 kostenfrei http://www.mdpi.com/1422-0067/19/6/1741 kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 19 2018 6, p 1741 |
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10.3390/ijms19061741 doi (DE-627)DOAJ035845422 (DE-599)DOAJe6d28d285b8b449188dde81228c7abf8 DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Huirong Yang verfasserin aut Characterization of the Complete Mitochondrial Genome Sequences of Three Croakers (Perciformes, Sciaenidae) and Novel Insights into the Phylogenetics 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The three croakers (Nibea coibor, Protonibea diacanthus and Argyrosomus amoyensis, Perciformes, Sciaenidae) are important commercial species inhabiting the Eastern Indian Ocean and Western Pacific. Molecular data employed in previous research on phylogenetic reconstruction have not been adequate and complete, and systematic and comprehensive phylogenetic relationships for these fish are unresolved. We sequenced the complete mitochondrial genomes of the three croakers using next-generation sequencing for the first time. We analyzed the composition and phylogenies between 19 species in the family Sciaenidae using the mitochondrial protein coding sequences of 204 species in the Series Eupercaria. We present the characterization of the complete mitochondrial genome sequences of the three croakers. Gene arrangement and distribution of the three croakers are canonically identical and consistent with other vertebrates. We found that the family Sciaenidae is an independent branch that is isolated from the order Perciformes and does not belong to any extant classification. Therefore, this family is expected to belong to a new classification at the order level and needs further analysis. The evolution of Sciaenidae has lagged far behind the Perciformes differentiation. This study presents a novel insight into the phylogenetics of the family Sciaenidae from the order Perciformes and facilitates additional studies on the evolution and phylogeny of Series Eupercaria. Nibea coibor Protonibea diacanthus Argyrosomus amoyensis Sciaenidae mitochondrial genome characterization phylogenetic analysis Biology (General) Chemistry Jun Xia verfasserin aut Jia-en Zhang verfasserin aut Jinzeng Yang verfasserin aut Huihong Zhao verfasserin aut Qing Wang verfasserin aut Jijia Sun verfasserin aut Huayi Xue verfasserin aut Yuanyuan Wu verfasserin aut Jiehu Chen verfasserin aut Jingchuan Huang verfasserin aut Li Liu verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 19(2018), 6, p 1741 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:19 year:2018 number:6, p 1741 https://doi.org/10.3390/ijms19061741 kostenfrei https://doaj.org/article/e6d28d285b8b449188dde81228c7abf8 kostenfrei http://www.mdpi.com/1422-0067/19/6/1741 kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 19 2018 6, p 1741 |
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10.3390/ijms19061741 doi (DE-627)DOAJ035845422 (DE-599)DOAJe6d28d285b8b449188dde81228c7abf8 DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Huirong Yang verfasserin aut Characterization of the Complete Mitochondrial Genome Sequences of Three Croakers (Perciformes, Sciaenidae) and Novel Insights into the Phylogenetics 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The three croakers (Nibea coibor, Protonibea diacanthus and Argyrosomus amoyensis, Perciformes, Sciaenidae) are important commercial species inhabiting the Eastern Indian Ocean and Western Pacific. Molecular data employed in previous research on phylogenetic reconstruction have not been adequate and complete, and systematic and comprehensive phylogenetic relationships for these fish are unresolved. We sequenced the complete mitochondrial genomes of the three croakers using next-generation sequencing for the first time. We analyzed the composition and phylogenies between 19 species in the family Sciaenidae using the mitochondrial protein coding sequences of 204 species in the Series Eupercaria. We present the characterization of the complete mitochondrial genome sequences of the three croakers. Gene arrangement and distribution of the three croakers are canonically identical and consistent with other vertebrates. We found that the family Sciaenidae is an independent branch that is isolated from the order Perciformes and does not belong to any extant classification. Therefore, this family is expected to belong to a new classification at the order level and needs further analysis. The evolution of Sciaenidae has lagged far behind the Perciformes differentiation. This study presents a novel insight into the phylogenetics of the family Sciaenidae from the order Perciformes and facilitates additional studies on the evolution and phylogeny of Series Eupercaria. Nibea coibor Protonibea diacanthus Argyrosomus amoyensis Sciaenidae mitochondrial genome characterization phylogenetic analysis Biology (General) Chemistry Jun Xia verfasserin aut Jia-en Zhang verfasserin aut Jinzeng Yang verfasserin aut Huihong Zhao verfasserin aut Qing Wang verfasserin aut Jijia Sun verfasserin aut Huayi Xue verfasserin aut Yuanyuan Wu verfasserin aut Jiehu Chen verfasserin aut Jingchuan Huang verfasserin aut Li Liu verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 19(2018), 6, p 1741 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:19 year:2018 number:6, p 1741 https://doi.org/10.3390/ijms19061741 kostenfrei https://doaj.org/article/e6d28d285b8b449188dde81228c7abf8 kostenfrei http://www.mdpi.com/1422-0067/19/6/1741 kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 19 2018 6, p 1741 |
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10.3390/ijms19061741 doi (DE-627)DOAJ035845422 (DE-599)DOAJe6d28d285b8b449188dde81228c7abf8 DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Huirong Yang verfasserin aut Characterization of the Complete Mitochondrial Genome Sequences of Three Croakers (Perciformes, Sciaenidae) and Novel Insights into the Phylogenetics 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The three croakers (Nibea coibor, Protonibea diacanthus and Argyrosomus amoyensis, Perciformes, Sciaenidae) are important commercial species inhabiting the Eastern Indian Ocean and Western Pacific. Molecular data employed in previous research on phylogenetic reconstruction have not been adequate and complete, and systematic and comprehensive phylogenetic relationships for these fish are unresolved. We sequenced the complete mitochondrial genomes of the three croakers using next-generation sequencing for the first time. We analyzed the composition and phylogenies between 19 species in the family Sciaenidae using the mitochondrial protein coding sequences of 204 species in the Series Eupercaria. We present the characterization of the complete mitochondrial genome sequences of the three croakers. Gene arrangement and distribution of the three croakers are canonically identical and consistent with other vertebrates. We found that the family Sciaenidae is an independent branch that is isolated from the order Perciformes and does not belong to any extant classification. Therefore, this family is expected to belong to a new classification at the order level and needs further analysis. The evolution of Sciaenidae has lagged far behind the Perciformes differentiation. This study presents a novel insight into the phylogenetics of the family Sciaenidae from the order Perciformes and facilitates additional studies on the evolution and phylogeny of Series Eupercaria. Nibea coibor Protonibea diacanthus Argyrosomus amoyensis Sciaenidae mitochondrial genome characterization phylogenetic analysis Biology (General) Chemistry Jun Xia verfasserin aut Jia-en Zhang verfasserin aut Jinzeng Yang verfasserin aut Huihong Zhao verfasserin aut Qing Wang verfasserin aut Jijia Sun verfasserin aut Huayi Xue verfasserin aut Yuanyuan Wu verfasserin aut Jiehu Chen verfasserin aut Jingchuan Huang verfasserin aut Li Liu verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 19(2018), 6, p 1741 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:19 year:2018 number:6, p 1741 https://doi.org/10.3390/ijms19061741 kostenfrei https://doaj.org/article/e6d28d285b8b449188dde81228c7abf8 kostenfrei http://www.mdpi.com/1422-0067/19/6/1741 kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 19 2018 6, p 1741 |
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10.3390/ijms19061741 doi (DE-627)DOAJ035845422 (DE-599)DOAJe6d28d285b8b449188dde81228c7abf8 DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Huirong Yang verfasserin aut Characterization of the Complete Mitochondrial Genome Sequences of Three Croakers (Perciformes, Sciaenidae) and Novel Insights into the Phylogenetics 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The three croakers (Nibea coibor, Protonibea diacanthus and Argyrosomus amoyensis, Perciformes, Sciaenidae) are important commercial species inhabiting the Eastern Indian Ocean and Western Pacific. Molecular data employed in previous research on phylogenetic reconstruction have not been adequate and complete, and systematic and comprehensive phylogenetic relationships for these fish are unresolved. We sequenced the complete mitochondrial genomes of the three croakers using next-generation sequencing for the first time. We analyzed the composition and phylogenies between 19 species in the family Sciaenidae using the mitochondrial protein coding sequences of 204 species in the Series Eupercaria. We present the characterization of the complete mitochondrial genome sequences of the three croakers. Gene arrangement and distribution of the three croakers are canonically identical and consistent with other vertebrates. We found that the family Sciaenidae is an independent branch that is isolated from the order Perciformes and does not belong to any extant classification. Therefore, this family is expected to belong to a new classification at the order level and needs further analysis. The evolution of Sciaenidae has lagged far behind the Perciformes differentiation. This study presents a novel insight into the phylogenetics of the family Sciaenidae from the order Perciformes and facilitates additional studies on the evolution and phylogeny of Series Eupercaria. Nibea coibor Protonibea diacanthus Argyrosomus amoyensis Sciaenidae mitochondrial genome characterization phylogenetic analysis Biology (General) Chemistry Jun Xia verfasserin aut Jia-en Zhang verfasserin aut Jinzeng Yang verfasserin aut Huihong Zhao verfasserin aut Qing Wang verfasserin aut Jijia Sun verfasserin aut Huayi Xue verfasserin aut Yuanyuan Wu verfasserin aut Jiehu Chen verfasserin aut Jingchuan Huang verfasserin aut Li Liu verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 19(2018), 6, p 1741 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:19 year:2018 number:6, p 1741 https://doi.org/10.3390/ijms19061741 kostenfrei https://doaj.org/article/e6d28d285b8b449188dde81228c7abf8 kostenfrei http://www.mdpi.com/1422-0067/19/6/1741 kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 19 2018 6, p 1741 |
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Huirong Yang Jun Xia Jia-en Zhang Jinzeng Yang Huihong Zhao Qing Wang Jijia Sun Huayi Xue Yuanyuan Wu Jiehu Chen Jingchuan Huang Li Liu |
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Huirong Yang |
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characterization of the complete mitochondrial genome sequences of three croakers (perciformes, sciaenidae) and novel insights into the phylogenetics |
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QH301-705.5 |
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Characterization of the Complete Mitochondrial Genome Sequences of Three Croakers (Perciformes, Sciaenidae) and Novel Insights into the Phylogenetics |
| abstract |
The three croakers (Nibea coibor, Protonibea diacanthus and Argyrosomus amoyensis, Perciformes, Sciaenidae) are important commercial species inhabiting the Eastern Indian Ocean and Western Pacific. Molecular data employed in previous research on phylogenetic reconstruction have not been adequate and complete, and systematic and comprehensive phylogenetic relationships for these fish are unresolved. We sequenced the complete mitochondrial genomes of the three croakers using next-generation sequencing for the first time. We analyzed the composition and phylogenies between 19 species in the family Sciaenidae using the mitochondrial protein coding sequences of 204 species in the Series Eupercaria. We present the characterization of the complete mitochondrial genome sequences of the three croakers. Gene arrangement and distribution of the three croakers are canonically identical and consistent with other vertebrates. We found that the family Sciaenidae is an independent branch that is isolated from the order Perciformes and does not belong to any extant classification. Therefore, this family is expected to belong to a new classification at the order level and needs further analysis. The evolution of Sciaenidae has lagged far behind the Perciformes differentiation. This study presents a novel insight into the phylogenetics of the family Sciaenidae from the order Perciformes and facilitates additional studies on the evolution and phylogeny of Series Eupercaria. |
| abstractGer |
The three croakers (Nibea coibor, Protonibea diacanthus and Argyrosomus amoyensis, Perciformes, Sciaenidae) are important commercial species inhabiting the Eastern Indian Ocean and Western Pacific. Molecular data employed in previous research on phylogenetic reconstruction have not been adequate and complete, and systematic and comprehensive phylogenetic relationships for these fish are unresolved. We sequenced the complete mitochondrial genomes of the three croakers using next-generation sequencing for the first time. We analyzed the composition and phylogenies between 19 species in the family Sciaenidae using the mitochondrial protein coding sequences of 204 species in the Series Eupercaria. We present the characterization of the complete mitochondrial genome sequences of the three croakers. Gene arrangement and distribution of the three croakers are canonically identical and consistent with other vertebrates. We found that the family Sciaenidae is an independent branch that is isolated from the order Perciformes and does not belong to any extant classification. Therefore, this family is expected to belong to a new classification at the order level and needs further analysis. The evolution of Sciaenidae has lagged far behind the Perciformes differentiation. This study presents a novel insight into the phylogenetics of the family Sciaenidae from the order Perciformes and facilitates additional studies on the evolution and phylogeny of Series Eupercaria. |
| abstract_unstemmed |
The three croakers (Nibea coibor, Protonibea diacanthus and Argyrosomus amoyensis, Perciformes, Sciaenidae) are important commercial species inhabiting the Eastern Indian Ocean and Western Pacific. Molecular data employed in previous research on phylogenetic reconstruction have not been adequate and complete, and systematic and comprehensive phylogenetic relationships for these fish are unresolved. We sequenced the complete mitochondrial genomes of the three croakers using next-generation sequencing for the first time. We analyzed the composition and phylogenies between 19 species in the family Sciaenidae using the mitochondrial protein coding sequences of 204 species in the Series Eupercaria. We present the characterization of the complete mitochondrial genome sequences of the three croakers. Gene arrangement and distribution of the three croakers are canonically identical and consistent with other vertebrates. We found that the family Sciaenidae is an independent branch that is isolated from the order Perciformes and does not belong to any extant classification. Therefore, this family is expected to belong to a new classification at the order level and needs further analysis. The evolution of Sciaenidae has lagged far behind the Perciformes differentiation. This study presents a novel insight into the phylogenetics of the family Sciaenidae from the order Perciformes and facilitates additional studies on the evolution and phylogeny of Series Eupercaria. |
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Characterization of the Complete Mitochondrial Genome Sequences of Three Croakers (Perciformes, Sciaenidae) and Novel Insights into the Phylogenetics |
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