Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii

The Snowtrout, Schizothorax richardsonii, is a vulnerable fish species found in different rivers and rivulets of the Himalayan region. The species is also a suitable poikilotherm to study the low-temperature tolerance as it dwells well at a temperature range of 5–20 °C. The solute carrier (SLC) grou...
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Autor*in:	Ashoktaru Barat [verfasserIn] Prabhati Kumari Sahoo [verfasserIn] Rohit Kumar [verfasserIn] Chirag Goel [verfasserIn] C. Siva [verfasserIn] Shahnawaz Ali [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2019

Übergeordnetes Werk:	In: Data in Brief - Elsevier, 2015, 23(2019), Seite -
Übergeordnetes Werk:	volume:23 ; year:2019 ; pages:-

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.1016/j.dib.2019.103712

Katalog-ID:	DOAJ038099462

Internformat


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520			\|a The Snowtrout, Schizothorax richardsonii, is a vulnerable fish species found in different rivers and rivulets of the Himalayan region. The species is also a suitable poikilotherm to study the low-temperature tolerance as it dwells well at a temperature range of 5–20 °C. The solute carrier (SLC) group of membrane transport proteins play an integral role in cellular acclimation response. The present RNA sequencing was done to identify solute carrier transporter which are the major gene cascades responsible for transport of sugars, amino acids, oligonucleotides, ions, drugs, etc. to and from the cell organelles. A reference transcriptome database was created from liver tissue of Schizothorax richardsonii through RNA sequencing on Illumina HiSeq 2000 platform. The sequences were annotated and characterized under various solute carrier families in the species. So far, 113 transcripts were identified as solute carrier transporter genes categorized under 13 different families. This data will be useful for many researchers working on gene cloning and differential expression of solute carriers. Keywords: RNA-Seq, Molecular characterization, Cellular transporters
653		0	\|a Computer applications to medicine. Medical informatics
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700	0		\|a Prabhati Kumari Sahoo \|e verfasserin \|4 aut
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700	0		\|a Chirag Goel \|e verfasserin \|4 aut
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912			\|a GBV_ILN_2010
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912			\|a GBV_ILN_2020
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912			\|a GBV_ILN_2025
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912			\|a GBV_ILN_4307
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912			\|a GBV_ILN_4322
912			\|a GBV_ILN_4323
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912			\|a GBV_ILN_4326
912			\|a GBV_ILN_4333
912			\|a GBV_ILN_4334
912			\|a GBV_ILN_4338
912			\|a GBV_ILN_4367
912			\|a GBV_ILN_4393
912			\|a GBV_ILN_4700
951			\|a AR
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matchkey_str	article:23523409:2019----::aanouearetasotreeoahetndiaaafsseis
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publishDate	2019
allfields	10.1016/j.dib.2019.103712 doi (DE-627)DOAJ038099462 (DE-599)DOAJ176bebe38cd24d23b76a090e6bfe5243 DE-627 ger DE-627 rakwb eng R858-859.7 Q1-390 Ashoktaru Barat verfasserin aut Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The Snowtrout, Schizothorax richardsonii, is a vulnerable fish species found in different rivers and rivulets of the Himalayan region. The species is also a suitable poikilotherm to study the low-temperature tolerance as it dwells well at a temperature range of 5–20 °C. The solute carrier (SLC) group of membrane transport proteins play an integral role in cellular acclimation response. The present RNA sequencing was done to identify solute carrier transporter which are the major gene cascades responsible for transport of sugars, amino acids, oligonucleotides, ions, drugs, etc. to and from the cell organelles. A reference transcriptome database was created from liver tissue of Schizothorax richardsonii through RNA sequencing on Illumina HiSeq 2000 platform. The sequences were annotated and characterized under various solute carrier families in the species. So far, 113 transcripts were identified as solute carrier transporter genes categorized under 13 different families. This data will be useful for many researchers working on gene cloning and differential expression of solute carriers. Keywords: RNA-Seq, Molecular characterization, Cellular transporters Computer applications to medicine. Medical informatics Science (General) Prabhati Kumari Sahoo verfasserin aut Rohit Kumar verfasserin aut Chirag Goel verfasserin aut C. Siva verfasserin aut Shahnawaz Ali verfasserin aut In Data in Brief Elsevier, 2015 23(2019), Seite - (DE-627)797838937 (DE-600)2786545-9 23523409 nnns volume:23 year:2019 pages:- https://doi.org/10.1016/j.dib.2019.103712 kostenfrei https://doaj.org/article/176bebe38cd24d23b76a090e6bfe5243 kostenfrei http://www.sciencedirect.com/science/article/pii/S2352340919300617 kostenfrei https://doaj.org/toc/2352-3409 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2034 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2088 GBV_ILN_2106 GBV_ILN_2110 GBV_ILN_2112 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4393 GBV_ILN_4700 AR 23 2019 -
spelling	10.1016/j.dib.2019.103712 doi (DE-627)DOAJ038099462 (DE-599)DOAJ176bebe38cd24d23b76a090e6bfe5243 DE-627 ger DE-627 rakwb eng R858-859.7 Q1-390 Ashoktaru Barat verfasserin aut Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The Snowtrout, Schizothorax richardsonii, is a vulnerable fish species found in different rivers and rivulets of the Himalayan region. The species is also a suitable poikilotherm to study the low-temperature tolerance as it dwells well at a temperature range of 5–20 °C. The solute carrier (SLC) group of membrane transport proteins play an integral role in cellular acclimation response. The present RNA sequencing was done to identify solute carrier transporter which are the major gene cascades responsible for transport of sugars, amino acids, oligonucleotides, ions, drugs, etc. to and from the cell organelles. A reference transcriptome database was created from liver tissue of Schizothorax richardsonii through RNA sequencing on Illumina HiSeq 2000 platform. The sequences were annotated and characterized under various solute carrier families in the species. So far, 113 transcripts were identified as solute carrier transporter genes categorized under 13 different families. This data will be useful for many researchers working on gene cloning and differential expression of solute carriers. Keywords: RNA-Seq, Molecular characterization, Cellular transporters Computer applications to medicine. Medical informatics Science (General) Prabhati Kumari Sahoo verfasserin aut Rohit Kumar verfasserin aut Chirag Goel verfasserin aut C. Siva verfasserin aut Shahnawaz Ali verfasserin aut In Data in Brief Elsevier, 2015 23(2019), Seite - (DE-627)797838937 (DE-600)2786545-9 23523409 nnns volume:23 year:2019 pages:- https://doi.org/10.1016/j.dib.2019.103712 kostenfrei https://doaj.org/article/176bebe38cd24d23b76a090e6bfe5243 kostenfrei http://www.sciencedirect.com/science/article/pii/S2352340919300617 kostenfrei https://doaj.org/toc/2352-3409 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2034 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2088 GBV_ILN_2106 GBV_ILN_2110 GBV_ILN_2112 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4393 GBV_ILN_4700 AR 23 2019 -
allfields_unstemmed	10.1016/j.dib.2019.103712 doi (DE-627)DOAJ038099462 (DE-599)DOAJ176bebe38cd24d23b76a090e6bfe5243 DE-627 ger DE-627 rakwb eng R858-859.7 Q1-390 Ashoktaru Barat verfasserin aut Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The Snowtrout, Schizothorax richardsonii, is a vulnerable fish species found in different rivers and rivulets of the Himalayan region. The species is also a suitable poikilotherm to study the low-temperature tolerance as it dwells well at a temperature range of 5–20 °C. The solute carrier (SLC) group of membrane transport proteins play an integral role in cellular acclimation response. The present RNA sequencing was done to identify solute carrier transporter which are the major gene cascades responsible for transport of sugars, amino acids, oligonucleotides, ions, drugs, etc. to and from the cell organelles. A reference transcriptome database was created from liver tissue of Schizothorax richardsonii through RNA sequencing on Illumina HiSeq 2000 platform. The sequences were annotated and characterized under various solute carrier families in the species. So far, 113 transcripts were identified as solute carrier transporter genes categorized under 13 different families. This data will be useful for many researchers working on gene cloning and differential expression of solute carriers. Keywords: RNA-Seq, Molecular characterization, Cellular transporters Computer applications to medicine. Medical informatics Science (General) Prabhati Kumari Sahoo verfasserin aut Rohit Kumar verfasserin aut Chirag Goel verfasserin aut C. Siva verfasserin aut Shahnawaz Ali verfasserin aut In Data in Brief Elsevier, 2015 23(2019), Seite - (DE-627)797838937 (DE-600)2786545-9 23523409 nnns volume:23 year:2019 pages:- https://doi.org/10.1016/j.dib.2019.103712 kostenfrei https://doaj.org/article/176bebe38cd24d23b76a090e6bfe5243 kostenfrei http://www.sciencedirect.com/science/article/pii/S2352340919300617 kostenfrei https://doaj.org/toc/2352-3409 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2034 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2088 GBV_ILN_2106 GBV_ILN_2110 GBV_ILN_2112 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4393 GBV_ILN_4700 AR 23 2019 -
allfieldsGer	10.1016/j.dib.2019.103712 doi (DE-627)DOAJ038099462 (DE-599)DOAJ176bebe38cd24d23b76a090e6bfe5243 DE-627 ger DE-627 rakwb eng R858-859.7 Q1-390 Ashoktaru Barat verfasserin aut Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The Snowtrout, Schizothorax richardsonii, is a vulnerable fish species found in different rivers and rivulets of the Himalayan region. The species is also a suitable poikilotherm to study the low-temperature tolerance as it dwells well at a temperature range of 5–20 °C. The solute carrier (SLC) group of membrane transport proteins play an integral role in cellular acclimation response. The present RNA sequencing was done to identify solute carrier transporter which are the major gene cascades responsible for transport of sugars, amino acids, oligonucleotides, ions, drugs, etc. to and from the cell organelles. A reference transcriptome database was created from liver tissue of Schizothorax richardsonii through RNA sequencing on Illumina HiSeq 2000 platform. The sequences were annotated and characterized under various solute carrier families in the species. So far, 113 transcripts were identified as solute carrier transporter genes categorized under 13 different families. This data will be useful for many researchers working on gene cloning and differential expression of solute carriers. Keywords: RNA-Seq, Molecular characterization, Cellular transporters Computer applications to medicine. Medical informatics Science (General) Prabhati Kumari Sahoo verfasserin aut Rohit Kumar verfasserin aut Chirag Goel verfasserin aut C. Siva verfasserin aut Shahnawaz Ali verfasserin aut In Data in Brief Elsevier, 2015 23(2019), Seite - (DE-627)797838937 (DE-600)2786545-9 23523409 nnns volume:23 year:2019 pages:- https://doi.org/10.1016/j.dib.2019.103712 kostenfrei https://doaj.org/article/176bebe38cd24d23b76a090e6bfe5243 kostenfrei http://www.sciencedirect.com/science/article/pii/S2352340919300617 kostenfrei https://doaj.org/toc/2352-3409 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2034 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2088 GBV_ILN_2106 GBV_ILN_2110 GBV_ILN_2112 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4393 GBV_ILN_4700 AR 23 2019 -
allfieldsSound	10.1016/j.dib.2019.103712 doi (DE-627)DOAJ038099462 (DE-599)DOAJ176bebe38cd24d23b76a090e6bfe5243 DE-627 ger DE-627 rakwb eng R858-859.7 Q1-390 Ashoktaru Barat verfasserin aut Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The Snowtrout, Schizothorax richardsonii, is a vulnerable fish species found in different rivers and rivulets of the Himalayan region. The species is also a suitable poikilotherm to study the low-temperature tolerance as it dwells well at a temperature range of 5–20 °C. The solute carrier (SLC) group of membrane transport proteins play an integral role in cellular acclimation response. The present RNA sequencing was done to identify solute carrier transporter which are the major gene cascades responsible for transport of sugars, amino acids, oligonucleotides, ions, drugs, etc. to and from the cell organelles. A reference transcriptome database was created from liver tissue of Schizothorax richardsonii through RNA sequencing on Illumina HiSeq 2000 platform. The sequences were annotated and characterized under various solute carrier families in the species. So far, 113 transcripts were identified as solute carrier transporter genes categorized under 13 different families. This data will be useful for many researchers working on gene cloning and differential expression of solute carriers. Keywords: RNA-Seq, Molecular characterization, Cellular transporters Computer applications to medicine. Medical informatics Science (General) Prabhati Kumari Sahoo verfasserin aut Rohit Kumar verfasserin aut Chirag Goel verfasserin aut C. Siva verfasserin aut Shahnawaz Ali verfasserin aut In Data in Brief Elsevier, 2015 23(2019), Seite - (DE-627)797838937 (DE-600)2786545-9 23523409 nnns volume:23 year:2019 pages:- https://doi.org/10.1016/j.dib.2019.103712 kostenfrei https://doaj.org/article/176bebe38cd24d23b76a090e6bfe5243 kostenfrei http://www.sciencedirect.com/science/article/pii/S2352340919300617 kostenfrei https://doaj.org/toc/2352-3409 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2034 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2088 GBV_ILN_2106 GBV_ILN_2110 GBV_ILN_2112 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4393 GBV_ILN_4700 AR 23 2019 -
language	English
source	In Data in Brief 23(2019), Seite - volume:23 year:2019 pages:-
sourceStr	In Data in Brief 23(2019), Seite - volume:23 year:2019 pages:-
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	Computer applications to medicine. Medical informatics Science (General)
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container_title	Data in Brief
authorswithroles_txt_mv	Ashoktaru Barat @@aut@@ Prabhati Kumari Sahoo @@aut@@ Rohit Kumar @@aut@@ Chirag Goel @@aut@@ C. Siva @@aut@@ Shahnawaz Ali @@aut@@
publishDateDaySort_date	2019-01-01T00:00:00Z
hierarchy_top_id	797838937
id	DOAJ038099462
language_de	englisch
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callnumber-first	R - Medicine
author	Ashoktaru Barat
spellingShingle	Ashoktaru Barat misc R858-859.7 misc Q1-390 misc Computer applications to medicine. Medical informatics misc Science (General) Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii
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topic_title	R858-859.7 Q1-390 Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii
topic	misc R858-859.7 misc Q1-390 misc Computer applications to medicine. Medical informatics misc Science (General)
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title	Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii
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title_full	Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii
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title_sort	data on solute carrier transporter genes of a threatened himalayan fish species – schizothorax richardsonii
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title_auth	Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii
abstract	The Snowtrout, Schizothorax richardsonii, is a vulnerable fish species found in different rivers and rivulets of the Himalayan region. The species is also a suitable poikilotherm to study the low-temperature tolerance as it dwells well at a temperature range of 5–20 °C. The solute carrier (SLC) group of membrane transport proteins play an integral role in cellular acclimation response. The present RNA sequencing was done to identify solute carrier transporter which are the major gene cascades responsible for transport of sugars, amino acids, oligonucleotides, ions, drugs, etc. to and from the cell organelles. A reference transcriptome database was created from liver tissue of Schizothorax richardsonii through RNA sequencing on Illumina HiSeq 2000 platform. The sequences were annotated and characterized under various solute carrier families in the species. So far, 113 transcripts were identified as solute carrier transporter genes categorized under 13 different families. This data will be useful for many researchers working on gene cloning and differential expression of solute carriers. Keywords: RNA-Seq, Molecular characterization, Cellular transporters
abstractGer	The Snowtrout, Schizothorax richardsonii, is a vulnerable fish species found in different rivers and rivulets of the Himalayan region. The species is also a suitable poikilotherm to study the low-temperature tolerance as it dwells well at a temperature range of 5–20 °C. The solute carrier (SLC) group of membrane transport proteins play an integral role in cellular acclimation response. The present RNA sequencing was done to identify solute carrier transporter which are the major gene cascades responsible for transport of sugars, amino acids, oligonucleotides, ions, drugs, etc. to and from the cell organelles. A reference transcriptome database was created from liver tissue of Schizothorax richardsonii through RNA sequencing on Illumina HiSeq 2000 platform. The sequences were annotated and characterized under various solute carrier families in the species. So far, 113 transcripts were identified as solute carrier transporter genes categorized under 13 different families. This data will be useful for many researchers working on gene cloning and differential expression of solute carriers. Keywords: RNA-Seq, Molecular characterization, Cellular transporters
abstract_unstemmed	The Snowtrout, Schizothorax richardsonii, is a vulnerable fish species found in different rivers and rivulets of the Himalayan region. The species is also a suitable poikilotherm to study the low-temperature tolerance as it dwells well at a temperature range of 5–20 °C. The solute carrier (SLC) group of membrane transport proteins play an integral role in cellular acclimation response. The present RNA sequencing was done to identify solute carrier transporter which are the major gene cascades responsible for transport of sugars, amino acids, oligonucleotides, ions, drugs, etc. to and from the cell organelles. A reference transcriptome database was created from liver tissue of Schizothorax richardsonii through RNA sequencing on Illumina HiSeq 2000 platform. The sequences were annotated and characterized under various solute carrier families in the species. So far, 113 transcripts were identified as solute carrier transporter genes categorized under 13 different families. This data will be useful for many researchers working on gene cloning and differential expression of solute carriers. Keywords: RNA-Seq, Molecular characterization, Cellular transporters
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title_short	Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii
url	https://doi.org/10.1016/j.dib.2019.103712 https://doaj.org/article/176bebe38cd24d23b76a090e6bfe5243 http://www.sciencedirect.com/science/article/pii/S2352340919300617 https://doaj.org/toc/2352-3409
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up_date	2024-07-03T16:00:45.878Z
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Data on solute carrier transporter genes of a threatened Himalayan fish species – Schizothorax richardsonii

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