Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil

ABSTRACT: Mangaba tree is a fruit tree species whose natural populations are fragmented by anthropic actions. For this reason, studies assessing the impact of fragmentation on the diversity and genetic structure of these populations are required in order to establish suitable conservation strategies...
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Autor*in:	Caetano Miguel Lemos Serrote [verfasserIn] Lia Rejane Silveira Reiniger [verfasserIn] Silvia Machado dos Santos Rabaiolli [verfasserIn] Charlene Moro Stefanel [verfasserIn] Karol Buuron da Silva [verfasserIn] Ana Cristina da Fonseca Ziegler [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch ; Portugiesisch

Erschienen:	2022

Schlagwörter:	Easypop genetic diversity habitat fragmentation mangaba tree microsatellites

Übergeordnetes Werk:	In: Ciência Rural - Universidade Federal de Santa Maria, 2004, 53(2022), 1
Übergeordnetes Werk:	volume:53 ; year:2022 ; number:1

Links:	Link aufrufen Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.1590/0103-8478cr20210179

Katalog-ID:	DOAJ040653153

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spelling	10.1590/0103-8478cr20210179 doi (DE-627)DOAJ040653153 (DE-599)DOAJa082e3cbcc2c4a7191e44aa0f4a81834 DE-627 ger DE-627 rakwb eng por S1-972 Caetano Miguel Lemos Serrote verfasserin aut Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier ABSTRACT: Mangaba tree is a fruit tree species whose natural populations are fragmented by anthropic actions. For this reason, studies assessing the impact of fragmentation on the diversity and genetic structure of these populations are required in order to establish suitable conservation strategies. In our study, we used data from analyzes through microsatellite markers in computer simulations to estimate the rates of migration and selfing of six mangaba populations. The studied populations are located in the northeastern states of Ceará, Pernambuco and Sergipe. We tested different selfing and migration rates and selected the combination that showed values of observed and expected heterozygosity closest to those previously obtained with microsatellite markers. According to our simulations, selfing and migration were moderate. This may have led to an increase in inbreeding and genetic drift, resulting in low genetic diversity. We recommend expanding the area and reducing disturbance to promote the occurrence of pollinators, which play an important role in increasing genetic diversity. Easypop genetic diversity habitat fragmentation mangaba tree microsatellites Agriculture S Agriculture (General) Lia Rejane Silveira Reiniger verfasserin aut Silvia Machado dos Santos Rabaiolli verfasserin aut Charlene Moro Stefanel verfasserin aut Karol Buuron da Silva verfasserin aut Ana Cristina da Fonseca Ziegler verfasserin aut In Ciência Rural Universidade Federal de Santa Maria, 2004 53(2022), 1 (DE-627)320649970 (DE-600)2025834-3 16784596 nnns volume:53 year:2022 number:1 https://doi.org/10.1590/0103-8478cr20210179 kostenfrei https://doaj.org/article/a082e3cbcc2c4a7191e44aa0f4a81834 kostenfrei http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782023000100402&lng=en&tlng=en kostenfrei http://www.scielo.br/pdf/cr/v53n1/1678-4596-cr-53-01-e20210176.pdf kostenfrei https://doaj.org/toc/1678-4596 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_252 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 53 2022 1
allfields_unstemmed	10.1590/0103-8478cr20210179 doi (DE-627)DOAJ040653153 (DE-599)DOAJa082e3cbcc2c4a7191e44aa0f4a81834 DE-627 ger DE-627 rakwb eng por S1-972 Caetano Miguel Lemos Serrote verfasserin aut Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier ABSTRACT: Mangaba tree is a fruit tree species whose natural populations are fragmented by anthropic actions. For this reason, studies assessing the impact of fragmentation on the diversity and genetic structure of these populations are required in order to establish suitable conservation strategies. In our study, we used data from analyzes through microsatellite markers in computer simulations to estimate the rates of migration and selfing of six mangaba populations. The studied populations are located in the northeastern states of Ceará, Pernambuco and Sergipe. We tested different selfing and migration rates and selected the combination that showed values of observed and expected heterozygosity closest to those previously obtained with microsatellite markers. According to our simulations, selfing and migration were moderate. This may have led to an increase in inbreeding and genetic drift, resulting in low genetic diversity. We recommend expanding the area and reducing disturbance to promote the occurrence of pollinators, which play an important role in increasing genetic diversity. Easypop genetic diversity habitat fragmentation mangaba tree microsatellites Agriculture S Agriculture (General) Lia Rejane Silveira Reiniger verfasserin aut Silvia Machado dos Santos Rabaiolli verfasserin aut Charlene Moro Stefanel verfasserin aut Karol Buuron da Silva verfasserin aut Ana Cristina da Fonseca Ziegler verfasserin aut In Ciência Rural Universidade Federal de Santa Maria, 2004 53(2022), 1 (DE-627)320649970 (DE-600)2025834-3 16784596 nnns volume:53 year:2022 number:1 https://doi.org/10.1590/0103-8478cr20210179 kostenfrei https://doaj.org/article/a082e3cbcc2c4a7191e44aa0f4a81834 kostenfrei http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782023000100402&lng=en&tlng=en kostenfrei http://www.scielo.br/pdf/cr/v53n1/1678-4596-cr-53-01-e20210176.pdf kostenfrei https://doaj.org/toc/1678-4596 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_252 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 53 2022 1
allfieldsGer	10.1590/0103-8478cr20210179 doi (DE-627)DOAJ040653153 (DE-599)DOAJa082e3cbcc2c4a7191e44aa0f4a81834 DE-627 ger DE-627 rakwb eng por S1-972 Caetano Miguel Lemos Serrote verfasserin aut Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier ABSTRACT: Mangaba tree is a fruit tree species whose natural populations are fragmented by anthropic actions. For this reason, studies assessing the impact of fragmentation on the diversity and genetic structure of these populations are required in order to establish suitable conservation strategies. In our study, we used data from analyzes through microsatellite markers in computer simulations to estimate the rates of migration and selfing of six mangaba populations. The studied populations are located in the northeastern states of Ceará, Pernambuco and Sergipe. We tested different selfing and migration rates and selected the combination that showed values of observed and expected heterozygosity closest to those previously obtained with microsatellite markers. According to our simulations, selfing and migration were moderate. This may have led to an increase in inbreeding and genetic drift, resulting in low genetic diversity. We recommend expanding the area and reducing disturbance to promote the occurrence of pollinators, which play an important role in increasing genetic diversity. Easypop genetic diversity habitat fragmentation mangaba tree microsatellites Agriculture S Agriculture (General) Lia Rejane Silveira Reiniger verfasserin aut Silvia Machado dos Santos Rabaiolli verfasserin aut Charlene Moro Stefanel verfasserin aut Karol Buuron da Silva verfasserin aut Ana Cristina da Fonseca Ziegler verfasserin aut In Ciência Rural Universidade Federal de Santa Maria, 2004 53(2022), 1 (DE-627)320649970 (DE-600)2025834-3 16784596 nnns volume:53 year:2022 number:1 https://doi.org/10.1590/0103-8478cr20210179 kostenfrei https://doaj.org/article/a082e3cbcc2c4a7191e44aa0f4a81834 kostenfrei http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782023000100402&lng=en&tlng=en kostenfrei http://www.scielo.br/pdf/cr/v53n1/1678-4596-cr-53-01-e20210176.pdf kostenfrei https://doaj.org/toc/1678-4596 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_252 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 53 2022 1
allfieldsSound	10.1590/0103-8478cr20210179 doi (DE-627)DOAJ040653153 (DE-599)DOAJa082e3cbcc2c4a7191e44aa0f4a81834 DE-627 ger DE-627 rakwb eng por S1-972 Caetano Miguel Lemos Serrote verfasserin aut Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier ABSTRACT: Mangaba tree is a fruit tree species whose natural populations are fragmented by anthropic actions. For this reason, studies assessing the impact of fragmentation on the diversity and genetic structure of these populations are required in order to establish suitable conservation strategies. In our study, we used data from analyzes through microsatellite markers in computer simulations to estimate the rates of migration and selfing of six mangaba populations. The studied populations are located in the northeastern states of Ceará, Pernambuco and Sergipe. We tested different selfing and migration rates and selected the combination that showed values of observed and expected heterozygosity closest to those previously obtained with microsatellite markers. According to our simulations, selfing and migration were moderate. This may have led to an increase in inbreeding and genetic drift, resulting in low genetic diversity. We recommend expanding the area and reducing disturbance to promote the occurrence of pollinators, which play an important role in increasing genetic diversity. Easypop genetic diversity habitat fragmentation mangaba tree microsatellites Agriculture S Agriculture (General) Lia Rejane Silveira Reiniger verfasserin aut Silvia Machado dos Santos Rabaiolli verfasserin aut Charlene Moro Stefanel verfasserin aut Karol Buuron da Silva verfasserin aut Ana Cristina da Fonseca Ziegler verfasserin aut In Ciência Rural Universidade Federal de Santa Maria, 2004 53(2022), 1 (DE-627)320649970 (DE-600)2025834-3 16784596 nnns volume:53 year:2022 number:1 https://doi.org/10.1590/0103-8478cr20210179 kostenfrei https://doaj.org/article/a082e3cbcc2c4a7191e44aa0f4a81834 kostenfrei http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782023000100402&lng=en&tlng=en kostenfrei http://www.scielo.br/pdf/cr/v53n1/1678-4596-cr-53-01-e20210176.pdf kostenfrei https://doaj.org/toc/1678-4596 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_252 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 53 2022 1
language	English Portuguese
source	In Ciência Rural 53(2022), 1 volume:53 year:2022 number:1
sourceStr	In Ciência Rural 53(2022), 1 volume:53 year:2022 number:1
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	Easypop genetic diversity habitat fragmentation mangaba tree microsatellites Agriculture S Agriculture (General)
isfreeaccess_bool	true
container_title	Ciência Rural
authorswithroles_txt_mv	Caetano Miguel Lemos Serrote @@aut@@ Lia Rejane Silveira Reiniger @@aut@@ Silvia Machado dos Santos Rabaiolli @@aut@@ Charlene Moro Stefanel @@aut@@ Karol Buuron da Silva @@aut@@ Ana Cristina da Fonseca Ziegler @@aut@@
publishDateDaySort_date	2022-01-01T00:00:00Z
hierarchy_top_id	320649970
id	DOAJ040653153
language_de	englisch portugiesisch
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callnumber-first	S - Agriculture
author	Caetano Miguel Lemos Serrote
spellingShingle	Caetano Miguel Lemos Serrote misc S1-972 misc Easypop misc genetic diversity misc habitat fragmentation misc mangaba tree misc microsatellites misc Agriculture misc S misc Agriculture (General) Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil
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topic_title	S1-972 Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil Easypop genetic diversity habitat fragmentation mangaba tree microsatellites
topic	misc S1-972 misc Easypop misc genetic diversity misc habitat fragmentation misc mangaba tree misc microsatellites misc Agriculture misc S misc Agriculture (General)
topic_unstemmed	misc S1-972 misc Easypop misc genetic diversity misc habitat fragmentation misc mangaba tree misc microsatellites misc Agriculture misc S misc Agriculture (General)
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title	Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil
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title_full	Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil
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author_browse	Caetano Miguel Lemos Serrote Lia Rejane Silveira Reiniger Silvia Machado dos Santos Rabaiolli Charlene Moro Stefanel Karol Buuron da Silva Ana Cristina da Fonseca Ziegler
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title_sort	genetic structure simulation for hancornia speciosa populations in northeast brazil
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title_auth	Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil
abstract	ABSTRACT: Mangaba tree is a fruit tree species whose natural populations are fragmented by anthropic actions. For this reason, studies assessing the impact of fragmentation on the diversity and genetic structure of these populations are required in order to establish suitable conservation strategies. In our study, we used data from analyzes through microsatellite markers in computer simulations to estimate the rates of migration and selfing of six mangaba populations. The studied populations are located in the northeastern states of Ceará, Pernambuco and Sergipe. We tested different selfing and migration rates and selected the combination that showed values of observed and expected heterozygosity closest to those previously obtained with microsatellite markers. According to our simulations, selfing and migration were moderate. This may have led to an increase in inbreeding and genetic drift, resulting in low genetic diversity. We recommend expanding the area and reducing disturbance to promote the occurrence of pollinators, which play an important role in increasing genetic diversity.
abstractGer	ABSTRACT: Mangaba tree is a fruit tree species whose natural populations are fragmented by anthropic actions. For this reason, studies assessing the impact of fragmentation on the diversity and genetic structure of these populations are required in order to establish suitable conservation strategies. In our study, we used data from analyzes through microsatellite markers in computer simulations to estimate the rates of migration and selfing of six mangaba populations. The studied populations are located in the northeastern states of Ceará, Pernambuco and Sergipe. We tested different selfing and migration rates and selected the combination that showed values of observed and expected heterozygosity closest to those previously obtained with microsatellite markers. According to our simulations, selfing and migration were moderate. This may have led to an increase in inbreeding and genetic drift, resulting in low genetic diversity. We recommend expanding the area and reducing disturbance to promote the occurrence of pollinators, which play an important role in increasing genetic diversity.
abstract_unstemmed	ABSTRACT: Mangaba tree is a fruit tree species whose natural populations are fragmented by anthropic actions. For this reason, studies assessing the impact of fragmentation on the diversity and genetic structure of these populations are required in order to establish suitable conservation strategies. In our study, we used data from analyzes through microsatellite markers in computer simulations to estimate the rates of migration and selfing of six mangaba populations. The studied populations are located in the northeastern states of Ceará, Pernambuco and Sergipe. We tested different selfing and migration rates and selected the combination that showed values of observed and expected heterozygosity closest to those previously obtained with microsatellite markers. According to our simulations, selfing and migration were moderate. This may have led to an increase in inbreeding and genetic drift, resulting in low genetic diversity. We recommend expanding the area and reducing disturbance to promote the occurrence of pollinators, which play an important role in increasing genetic diversity.
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title_short	Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil
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Genetic structure simulation for Hancornia speciosa populations in Northeast Brazil

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