Comprehensive Genome Analysis of 6,000 USA SARS-CoV-2 Isolates Reveals Haplotype Signatures and Localized Transmission Patterns by State and by Country

Genomic analysis of SARS-CoV-2 sequences is crucial in determining the effectiveness of prudent safer at home measures in the United States (US). By haplotype analysis of 6,356 US isolates, we identified a pattern of strongly localized outbreaks at the city-, state-, and country-levels, and temporal...
Ausführliche Beschreibung

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Autor*in:	Lishuang Shen [verfasserIn] Jennifer Dien Bard [verfasserIn] Jaclyn A. Biegel [verfasserIn] Alexander R. Judkins [verfasserIn] Xiaowu Gai [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2020

Schlagwörter:	COVID-19 SARS-CoV-2 haplotype variant localized outbreak temporal transmission

Übergeordnetes Werk:	In: Frontiers in Microbiology - Frontiers Media S.A., 2011, 11(2020)
Übergeordnetes Werk:	volume:11 ; year:2020

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3389/fmicb.2020.573430

Katalog-ID:	DOAJ043802249

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callnumber-first	Q - Science
author	Lishuang Shen
spellingShingle	Lishuang Shen misc QR1-502 misc COVID-19 misc SARS-CoV-2 misc haplotype misc variant misc localized outbreak misc temporal transmission misc Microbiology Comprehensive Genome Analysis of 6,000 USA SARS-CoV-2 Isolates Reveals Haplotype Signatures and Localized Transmission Patterns by State and by Country
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topic_title	QR1-502 Comprehensive Genome Analysis of 6,000 USA SARS-CoV-2 Isolates Reveals Haplotype Signatures and Localized Transmission Patterns by State and by Country COVID-19 SARS-CoV-2 haplotype variant localized outbreak temporal transmission
topic	misc QR1-502 misc COVID-19 misc SARS-CoV-2 misc haplotype misc variant misc localized outbreak misc temporal transmission misc Microbiology
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title	Comprehensive Genome Analysis of 6,000 USA SARS-CoV-2 Isolates Reveals Haplotype Signatures and Localized Transmission Patterns by State and by Country
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title_sort	comprehensive genome analysis of 6,000 usa sars-cov-2 isolates reveals haplotype signatures and localized transmission patterns by state and by country
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title_auth	Comprehensive Genome Analysis of 6,000 USA SARS-CoV-2 Isolates Reveals Haplotype Signatures and Localized Transmission Patterns by State and by Country
abstract	Genomic analysis of SARS-CoV-2 sequences is crucial in determining the effectiveness of prudent safer at home measures in the United States (US). By haplotype analysis of 6,356 US isolates, we identified a pattern of strongly localized outbreaks at the city-, state-, and country-levels, and temporal transmissions. This points to the effectiveness of existing travel restriction policies and public health measures in reducing the transmission of SARS-CoV-2.
abstractGer	Genomic analysis of SARS-CoV-2 sequences is crucial in determining the effectiveness of prudent safer at home measures in the United States (US). By haplotype analysis of 6,356 US isolates, we identified a pattern of strongly localized outbreaks at the city-, state-, and country-levels, and temporal transmissions. This points to the effectiveness of existing travel restriction policies and public health measures in reducing the transmission of SARS-CoV-2.
abstract_unstemmed	Genomic analysis of SARS-CoV-2 sequences is crucial in determining the effectiveness of prudent safer at home measures in the United States (US). By haplotype analysis of 6,356 US isolates, we identified a pattern of strongly localized outbreaks at the city-, state-, and country-levels, and temporal transmissions. This points to the effectiveness of existing travel restriction policies and public health measures in reducing the transmission of SARS-CoV-2.
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title_short	Comprehensive Genome Analysis of 6,000 USA SARS-CoV-2 Isolates Reveals Haplotype Signatures and Localized Transmission Patterns by State and by Country
url	https://doi.org/10.3389/fmicb.2020.573430 https://doaj.org/article/8bc3c67240da4c278b62c7403755aa51 https://www.frontiersin.org/article/10.3389/fmicb.2020.573430/full https://doaj.org/toc/1664-302X
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