A genome survey of <it<Moniliophthora perniciosa </it<gives new insights into Witches' Broom Disease of cacao
<p<Abstract</p< <p<Background</p< <p<The basidiomycete fungus <it<Moniliophthora perniciosa </it<is the causal agent of Witches' Broom Disease (WBD) in cacao (<it<Theobroma cacao</it<). It is a hemibiotrophic pathogen that colonizes the apop...
Ausführliche Beschreibung
Gespeichert in:
| Autor*in: |
Bailey Bryan A [verfasserIn] Guiltinan Mark J [verfasserIn] Barbosa Luciana V [verfasserIn] Neto Aristóteles [verfasserIn] Neto José [verfasserIn] Gonçalves Marilda S [verfasserIn] Gramacho Karina P [verfasserIn] Castro Luis AB [verfasserIn] de Moraes Marcos H [verfasserIn] Araújo Marcos [verfasserIn] Rio Maria [verfasserIn] Pires Acássia BL [verfasserIn] de Oliveira Bruno V [verfasserIn] Thomazella Daniela PT [verfasserIn] García Odalys [verfasserIn] Estrela Raíssa C [verfasserIn] Vidal Ramon O [verfasserIn] Carrer Helaine [verfasserIn] Cunha Anderson F [verfasserIn] Carraro Dirce M [verfasserIn] Cotomacci Carolina [verfasserIn] Rincones Johana [verfasserIn] Parizzi Lucas P [verfasserIn] Formighieri Eduardo F [verfasserIn] Costa Gustavo GL [verfasserIn] Carazzolle Marcelo F [verfasserIn] Mondego Jorge MC [verfasserIn] Meinhardt Lyndel W [verfasserIn] Cascardo Julio CM [verfasserIn] Pereira Gonçalo AG [verfasserIn] |
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| Format: |
E-Artikel |
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| Sprache: |
Englisch |
| Erschienen: |
2008 |
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| Übergeordnetes Werk: |
In: BMC Genomics - BMC, 2003, 9(2008), 1, p 548 |
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| Übergeordnetes Werk: |
volume:9 ; year:2008 ; number:1, p 548 |
| Links: |
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| DOI / URN: |
10.1186/1471-2164-9-548 |
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| Katalog-ID: |
DOAJ045095639 |
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| 245 | 1 | 2 | |a A genome survey of <it<Moniliophthora perniciosa </it<gives new insights into Witches' Broom Disease of cacao |
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| 520 | |a <p<Abstract</p< <p<Background</p< <p<The basidiomycete fungus <it<Moniliophthora perniciosa </it<is the causal agent of Witches' Broom Disease (WBD) in cacao (<it<Theobroma cacao</it<). It is a hemibiotrophic pathogen that colonizes the apoplast of cacao's meristematic tissues as a biotrophic pathogen, switching to a saprotrophic lifestyle during later stages of infection. <it<M. perniciosa</it<, together with the related species <it<M. roreri</it<, are pathogens of aerial parts of the plant, an uncommon characteristic in the order Agaricales. A genome survey (1.9× coverage) of <it<M. perniciosa </it<was analyzed to evaluate the overall gene content of this phytopathogen.</p< <p<Results</p< <p<Genes encoding proteins involved in retrotransposition, reactive oxygen species (ROS) resistance, drug efflux transport and cell wall degradation were identified. The great number of genes encoding cytochrome P450 monooxygenases (1.15% of gene models) indicates that <it<M. perniciosa </it<has a great potential for detoxification, production of toxins and hormones; which may confer a high adaptive ability to the fungus. We have also discovered new genes encoding putative secreted polypeptides rich in cysteine, as well as genes related to methylotrophy and plant hormone biosynthesis (gibberellin and auxin). Analysis of gene families indicated that <it<M. perniciosa </it<have similar amounts of carboxylesterases and repertoires of plant cell wall degrading enzymes as other hemibiotrophic fungi. In addition, an approach for normalization of gene family data using incomplete genome data was developed and applied in <it<M. perniciosa </it<genome survey.</p< <p<Conclusion</p< <p<This genome survey gives an overview of the <it<M. perniciosa </it<genome, and reveals that a significant portion is involved in stress adaptation and plant necrosis, two necessary characteristics for a hemibiotrophic fungus to fulfill its infection cycle. Our analysis provides new evidence revealing potential adaptive traits that may play major roles in the mechanisms of pathogenicity in the <it<M. perniciosa</it</cacao pathosystem.</p< | ||
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10.1186/1471-2164-9-548 doi (DE-627)DOAJ045095639 (DE-599)DOAJ53735bdf22db4018927c184ec08eda9b DE-627 ger DE-627 rakwb eng TP248.13-248.65 QH426-470 Bailey Bryan A verfasserin aut A genome survey of <it<Moniliophthora perniciosa </it<gives new insights into Witches' Broom Disease of cacao 2008 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Abstract</p< <p<Background</p< <p<The basidiomycete fungus <it<Moniliophthora perniciosa </it<is the causal agent of Witches' Broom Disease (WBD) in cacao (<it<Theobroma cacao</it<). It is a hemibiotrophic pathogen that colonizes the apoplast of cacao's meristematic tissues as a biotrophic pathogen, switching to a saprotrophic lifestyle during later stages of infection. <it<M. perniciosa</it<, together with the related species <it<M. roreri</it<, are pathogens of aerial parts of the plant, an uncommon characteristic in the order Agaricales. A genome survey (1.9× coverage) of <it<M. perniciosa </it<was analyzed to evaluate the overall gene content of this phytopathogen.</p< <p<Results</p< <p<Genes encoding proteins involved in retrotransposition, reactive oxygen species (ROS) resistance, drug efflux transport and cell wall degradation were identified. The great number of genes encoding cytochrome P450 monooxygenases (1.15% of gene models) indicates that <it<M. perniciosa </it<has a great potential for detoxification, production of toxins and hormones; which may confer a high adaptive ability to the fungus. We have also discovered new genes encoding putative secreted polypeptides rich in cysteine, as well as genes related to methylotrophy and plant hormone biosynthesis (gibberellin and auxin). Analysis of gene families indicated that <it<M. perniciosa </it<have similar amounts of carboxylesterases and repertoires of plant cell wall degrading enzymes as other hemibiotrophic fungi. In addition, an approach for normalization of gene family data using incomplete genome data was developed and applied in <it<M. perniciosa </it<genome survey.</p< <p<Conclusion</p< <p<This genome survey gives an overview of the <it<M. perniciosa </it<genome, and reveals that a significant portion is involved in stress adaptation and plant necrosis, two necessary characteristics for a hemibiotrophic fungus to fulfill its infection cycle. Our analysis provides new evidence revealing potential adaptive traits that may play major roles in the mechanisms of pathogenicity in the <it<M. perniciosa</it</cacao pathosystem.</p< Biotechnology Genetics Guiltinan Mark J verfasserin aut Barbosa Luciana V verfasserin aut Neto Aristóteles verfasserin aut Neto José verfasserin aut Gonçalves Marilda S verfasserin aut Gramacho Karina P verfasserin aut Castro Luis AB verfasserin aut de Moraes Marcos H verfasserin aut Araújo Marcos verfasserin aut Rio Maria verfasserin aut Pires Acássia BL verfasserin aut de Oliveira Bruno V verfasserin aut Thomazella Daniela PT verfasserin aut García Odalys verfasserin aut Estrela Raíssa C verfasserin aut Vidal Ramon O verfasserin aut Carrer Helaine verfasserin aut Cunha Anderson F verfasserin aut Carraro Dirce M verfasserin aut Cotomacci Carolina verfasserin aut Rincones Johana verfasserin aut Parizzi Lucas P verfasserin aut Formighieri Eduardo F verfasserin aut Costa Gustavo GL verfasserin aut Carazzolle Marcelo F verfasserin aut Mondego Jorge MC verfasserin aut Meinhardt Lyndel W verfasserin aut Cascardo Julio CM verfasserin aut Pereira Gonçalo AG verfasserin aut In BMC Genomics BMC, 2003 9(2008), 1, p 548 (DE-627)326644954 (DE-600)2041499-7 14712164 nnns volume:9 year:2008 number:1, p 548 https://doi.org/10.1186/1471-2164-9-548 kostenfrei https://doaj.org/article/53735bdf22db4018927c184ec08eda9b kostenfrei http://www.biomedcentral.com/1471-2164/9/548 kostenfrei https://doaj.org/toc/1471-2164 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 9 2008 1, p 548 |
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10.1186/1471-2164-9-548 doi (DE-627)DOAJ045095639 (DE-599)DOAJ53735bdf22db4018927c184ec08eda9b DE-627 ger DE-627 rakwb eng TP248.13-248.65 QH426-470 Bailey Bryan A verfasserin aut A genome survey of <it<Moniliophthora perniciosa </it<gives new insights into Witches' Broom Disease of cacao 2008 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Abstract</p< <p<Background</p< <p<The basidiomycete fungus <it<Moniliophthora perniciosa </it<is the causal agent of Witches' Broom Disease (WBD) in cacao (<it<Theobroma cacao</it<). It is a hemibiotrophic pathogen that colonizes the apoplast of cacao's meristematic tissues as a biotrophic pathogen, switching to a saprotrophic lifestyle during later stages of infection. <it<M. perniciosa</it<, together with the related species <it<M. roreri</it<, are pathogens of aerial parts of the plant, an uncommon characteristic in the order Agaricales. A genome survey (1.9× coverage) of <it<M. perniciosa </it<was analyzed to evaluate the overall gene content of this phytopathogen.</p< <p<Results</p< <p<Genes encoding proteins involved in retrotransposition, reactive oxygen species (ROS) resistance, drug efflux transport and cell wall degradation were identified. The great number of genes encoding cytochrome P450 monooxygenases (1.15% of gene models) indicates that <it<M. perniciosa </it<has a great potential for detoxification, production of toxins and hormones; which may confer a high adaptive ability to the fungus. We have also discovered new genes encoding putative secreted polypeptides rich in cysteine, as well as genes related to methylotrophy and plant hormone biosynthesis (gibberellin and auxin). Analysis of gene families indicated that <it<M. perniciosa </it<have similar amounts of carboxylesterases and repertoires of plant cell wall degrading enzymes as other hemibiotrophic fungi. In addition, an approach for normalization of gene family data using incomplete genome data was developed and applied in <it<M. perniciosa </it<genome survey.</p< <p<Conclusion</p< <p<This genome survey gives an overview of the <it<M. perniciosa </it<genome, and reveals that a significant portion is involved in stress adaptation and plant necrosis, two necessary characteristics for a hemibiotrophic fungus to fulfill its infection cycle. Our analysis provides new evidence revealing potential adaptive traits that may play major roles in the mechanisms of pathogenicity in the <it<M. perniciosa</it</cacao pathosystem.</p< Biotechnology Genetics Guiltinan Mark J verfasserin aut Barbosa Luciana V verfasserin aut Neto Aristóteles verfasserin aut Neto José verfasserin aut Gonçalves Marilda S verfasserin aut Gramacho Karina P verfasserin aut Castro Luis AB verfasserin aut de Moraes Marcos H verfasserin aut Araújo Marcos verfasserin aut Rio Maria verfasserin aut Pires Acássia BL verfasserin aut de Oliveira Bruno V verfasserin aut Thomazella Daniela PT verfasserin aut García Odalys verfasserin aut Estrela Raíssa C verfasserin aut Vidal Ramon O verfasserin aut Carrer Helaine verfasserin aut Cunha Anderson F verfasserin aut Carraro Dirce M verfasserin aut Cotomacci Carolina verfasserin aut Rincones Johana verfasserin aut Parizzi Lucas P verfasserin aut Formighieri Eduardo F verfasserin aut Costa Gustavo GL verfasserin aut Carazzolle Marcelo F verfasserin aut Mondego Jorge MC verfasserin aut Meinhardt Lyndel W verfasserin aut Cascardo Julio CM verfasserin aut Pereira Gonçalo AG verfasserin aut In BMC Genomics BMC, 2003 9(2008), 1, p 548 (DE-627)326644954 (DE-600)2041499-7 14712164 nnns volume:9 year:2008 number:1, p 548 https://doi.org/10.1186/1471-2164-9-548 kostenfrei https://doaj.org/article/53735bdf22db4018927c184ec08eda9b kostenfrei http://www.biomedcentral.com/1471-2164/9/548 kostenfrei https://doaj.org/toc/1471-2164 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 9 2008 1, p 548 |
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10.1186/1471-2164-9-548 doi (DE-627)DOAJ045095639 (DE-599)DOAJ53735bdf22db4018927c184ec08eda9b DE-627 ger DE-627 rakwb eng TP248.13-248.65 QH426-470 Bailey Bryan A verfasserin aut A genome survey of <it<Moniliophthora perniciosa </it<gives new insights into Witches' Broom Disease of cacao 2008 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Abstract</p< <p<Background</p< <p<The basidiomycete fungus <it<Moniliophthora perniciosa </it<is the causal agent of Witches' Broom Disease (WBD) in cacao (<it<Theobroma cacao</it<). It is a hemibiotrophic pathogen that colonizes the apoplast of cacao's meristematic tissues as a biotrophic pathogen, switching to a saprotrophic lifestyle during later stages of infection. <it<M. perniciosa</it<, together with the related species <it<M. roreri</it<, are pathogens of aerial parts of the plant, an uncommon characteristic in the order Agaricales. A genome survey (1.9× coverage) of <it<M. perniciosa </it<was analyzed to evaluate the overall gene content of this phytopathogen.</p< <p<Results</p< <p<Genes encoding proteins involved in retrotransposition, reactive oxygen species (ROS) resistance, drug efflux transport and cell wall degradation were identified. The great number of genes encoding cytochrome P450 monooxygenases (1.15% of gene models) indicates that <it<M. perniciosa </it<has a great potential for detoxification, production of toxins and hormones; which may confer a high adaptive ability to the fungus. We have also discovered new genes encoding putative secreted polypeptides rich in cysteine, as well as genes related to methylotrophy and plant hormone biosynthesis (gibberellin and auxin). Analysis of gene families indicated that <it<M. perniciosa </it<have similar amounts of carboxylesterases and repertoires of plant cell wall degrading enzymes as other hemibiotrophic fungi. In addition, an approach for normalization of gene family data using incomplete genome data was developed and applied in <it<M. perniciosa </it<genome survey.</p< <p<Conclusion</p< <p<This genome survey gives an overview of the <it<M. perniciosa </it<genome, and reveals that a significant portion is involved in stress adaptation and plant necrosis, two necessary characteristics for a hemibiotrophic fungus to fulfill its infection cycle. Our analysis provides new evidence revealing potential adaptive traits that may play major roles in the mechanisms of pathogenicity in the <it<M. perniciosa</it</cacao pathosystem.</p< Biotechnology Genetics Guiltinan Mark J verfasserin aut Barbosa Luciana V verfasserin aut Neto Aristóteles verfasserin aut Neto José verfasserin aut Gonçalves Marilda S verfasserin aut Gramacho Karina P verfasserin aut Castro Luis AB verfasserin aut de Moraes Marcos H verfasserin aut Araújo Marcos verfasserin aut Rio Maria verfasserin aut Pires Acássia BL verfasserin aut de Oliveira Bruno V verfasserin aut Thomazella Daniela PT verfasserin aut García Odalys verfasserin aut Estrela Raíssa C verfasserin aut Vidal Ramon O verfasserin aut Carrer Helaine verfasserin aut Cunha Anderson F verfasserin aut Carraro Dirce M verfasserin aut Cotomacci Carolina verfasserin aut Rincones Johana verfasserin aut Parizzi Lucas P verfasserin aut Formighieri Eduardo F verfasserin aut Costa Gustavo GL verfasserin aut Carazzolle Marcelo F verfasserin aut Mondego Jorge MC verfasserin aut Meinhardt Lyndel W verfasserin aut Cascardo Julio CM verfasserin aut Pereira Gonçalo AG verfasserin aut In BMC Genomics BMC, 2003 9(2008), 1, p 548 (DE-627)326644954 (DE-600)2041499-7 14712164 nnns volume:9 year:2008 number:1, p 548 https://doi.org/10.1186/1471-2164-9-548 kostenfrei https://doaj.org/article/53735bdf22db4018927c184ec08eda9b kostenfrei http://www.biomedcentral.com/1471-2164/9/548 kostenfrei https://doaj.org/toc/1471-2164 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 9 2008 1, p 548 |
| allfieldsGer |
10.1186/1471-2164-9-548 doi (DE-627)DOAJ045095639 (DE-599)DOAJ53735bdf22db4018927c184ec08eda9b DE-627 ger DE-627 rakwb eng TP248.13-248.65 QH426-470 Bailey Bryan A verfasserin aut A genome survey of <it<Moniliophthora perniciosa </it<gives new insights into Witches' Broom Disease of cacao 2008 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Abstract</p< <p<Background</p< <p<The basidiomycete fungus <it<Moniliophthora perniciosa </it<is the causal agent of Witches' Broom Disease (WBD) in cacao (<it<Theobroma cacao</it<). It is a hemibiotrophic pathogen that colonizes the apoplast of cacao's meristematic tissues as a biotrophic pathogen, switching to a saprotrophic lifestyle during later stages of infection. <it<M. perniciosa</it<, together with the related species <it<M. roreri</it<, are pathogens of aerial parts of the plant, an uncommon characteristic in the order Agaricales. A genome survey (1.9× coverage) of <it<M. perniciosa </it<was analyzed to evaluate the overall gene content of this phytopathogen.</p< <p<Results</p< <p<Genes encoding proteins involved in retrotransposition, reactive oxygen species (ROS) resistance, drug efflux transport and cell wall degradation were identified. The great number of genes encoding cytochrome P450 monooxygenases (1.15% of gene models) indicates that <it<M. perniciosa </it<has a great potential for detoxification, production of toxins and hormones; which may confer a high adaptive ability to the fungus. We have also discovered new genes encoding putative secreted polypeptides rich in cysteine, as well as genes related to methylotrophy and plant hormone biosynthesis (gibberellin and auxin). Analysis of gene families indicated that <it<M. perniciosa </it<have similar amounts of carboxylesterases and repertoires of plant cell wall degrading enzymes as other hemibiotrophic fungi. In addition, an approach for normalization of gene family data using incomplete genome data was developed and applied in <it<M. perniciosa </it<genome survey.</p< <p<Conclusion</p< <p<This genome survey gives an overview of the <it<M. perniciosa </it<genome, and reveals that a significant portion is involved in stress adaptation and plant necrosis, two necessary characteristics for a hemibiotrophic fungus to fulfill its infection cycle. Our analysis provides new evidence revealing potential adaptive traits that may play major roles in the mechanisms of pathogenicity in the <it<M. perniciosa</it</cacao pathosystem.</p< Biotechnology Genetics Guiltinan Mark J verfasserin aut Barbosa Luciana V verfasserin aut Neto Aristóteles verfasserin aut Neto José verfasserin aut Gonçalves Marilda S verfasserin aut Gramacho Karina P verfasserin aut Castro Luis AB verfasserin aut de Moraes Marcos H verfasserin aut Araújo Marcos verfasserin aut Rio Maria verfasserin aut Pires Acássia BL verfasserin aut de Oliveira Bruno V verfasserin aut Thomazella Daniela PT verfasserin aut García Odalys verfasserin aut Estrela Raíssa C verfasserin aut Vidal Ramon O verfasserin aut Carrer Helaine verfasserin aut Cunha Anderson F verfasserin aut Carraro Dirce M verfasserin aut Cotomacci Carolina verfasserin aut Rincones Johana verfasserin aut Parizzi Lucas P verfasserin aut Formighieri Eduardo F verfasserin aut Costa Gustavo GL verfasserin aut Carazzolle Marcelo F verfasserin aut Mondego Jorge MC verfasserin aut Meinhardt Lyndel W verfasserin aut Cascardo Julio CM verfasserin aut Pereira Gonçalo AG verfasserin aut In BMC Genomics BMC, 2003 9(2008), 1, p 548 (DE-627)326644954 (DE-600)2041499-7 14712164 nnns volume:9 year:2008 number:1, p 548 https://doi.org/10.1186/1471-2164-9-548 kostenfrei https://doaj.org/article/53735bdf22db4018927c184ec08eda9b kostenfrei http://www.biomedcentral.com/1471-2164/9/548 kostenfrei https://doaj.org/toc/1471-2164 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 9 2008 1, p 548 |
| allfieldsSound |
10.1186/1471-2164-9-548 doi (DE-627)DOAJ045095639 (DE-599)DOAJ53735bdf22db4018927c184ec08eda9b DE-627 ger DE-627 rakwb eng TP248.13-248.65 QH426-470 Bailey Bryan A verfasserin aut A genome survey of <it<Moniliophthora perniciosa </it<gives new insights into Witches' Broom Disease of cacao 2008 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Abstract</p< <p<Background</p< <p<The basidiomycete fungus <it<Moniliophthora perniciosa </it<is the causal agent of Witches' Broom Disease (WBD) in cacao (<it<Theobroma cacao</it<). It is a hemibiotrophic pathogen that colonizes the apoplast of cacao's meristematic tissues as a biotrophic pathogen, switching to a saprotrophic lifestyle during later stages of infection. <it<M. perniciosa</it<, together with the related species <it<M. roreri</it<, are pathogens of aerial parts of the plant, an uncommon characteristic in the order Agaricales. A genome survey (1.9× coverage) of <it<M. perniciosa </it<was analyzed to evaluate the overall gene content of this phytopathogen.</p< <p<Results</p< <p<Genes encoding proteins involved in retrotransposition, reactive oxygen species (ROS) resistance, drug efflux transport and cell wall degradation were identified. The great number of genes encoding cytochrome P450 monooxygenases (1.15% of gene models) indicates that <it<M. perniciosa </it<has a great potential for detoxification, production of toxins and hormones; which may confer a high adaptive ability to the fungus. We have also discovered new genes encoding putative secreted polypeptides rich in cysteine, as well as genes related to methylotrophy and plant hormone biosynthesis (gibberellin and auxin). Analysis of gene families indicated that <it<M. perniciosa </it<have similar amounts of carboxylesterases and repertoires of plant cell wall degrading enzymes as other hemibiotrophic fungi. In addition, an approach for normalization of gene family data using incomplete genome data was developed and applied in <it<M. perniciosa </it<genome survey.</p< <p<Conclusion</p< <p<This genome survey gives an overview of the <it<M. perniciosa </it<genome, and reveals that a significant portion is involved in stress adaptation and plant necrosis, two necessary characteristics for a hemibiotrophic fungus to fulfill its infection cycle. Our analysis provides new evidence revealing potential adaptive traits that may play major roles in the mechanisms of pathogenicity in the <it<M. perniciosa</it</cacao pathosystem.</p< Biotechnology Genetics Guiltinan Mark J verfasserin aut Barbosa Luciana V verfasserin aut Neto Aristóteles verfasserin aut Neto José verfasserin aut Gonçalves Marilda S verfasserin aut Gramacho Karina P verfasserin aut Castro Luis AB verfasserin aut de Moraes Marcos H verfasserin aut Araújo Marcos verfasserin aut Rio Maria verfasserin aut Pires Acássia BL verfasserin aut de Oliveira Bruno V verfasserin aut Thomazella Daniela PT verfasserin aut García Odalys verfasserin aut Estrela Raíssa C verfasserin aut Vidal Ramon O verfasserin aut Carrer Helaine verfasserin aut Cunha Anderson F verfasserin aut Carraro Dirce M verfasserin aut Cotomacci Carolina verfasserin aut Rincones Johana verfasserin aut Parizzi Lucas P verfasserin aut Formighieri Eduardo F verfasserin aut Costa Gustavo GL verfasserin aut Carazzolle Marcelo F verfasserin aut Mondego Jorge MC verfasserin aut Meinhardt Lyndel W verfasserin aut Cascardo Julio CM verfasserin aut Pereira Gonçalo AG verfasserin aut In BMC Genomics BMC, 2003 9(2008), 1, p 548 (DE-627)326644954 (DE-600)2041499-7 14712164 nnns volume:9 year:2008 number:1, p 548 https://doi.org/10.1186/1471-2164-9-548 kostenfrei https://doaj.org/article/53735bdf22db4018927c184ec08eda9b kostenfrei http://www.biomedcentral.com/1471-2164/9/548 kostenfrei https://doaj.org/toc/1471-2164 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 9 2008 1, p 548 |
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It is a hemibiotrophic pathogen that colonizes the apoplast of cacao's meristematic tissues as a biotrophic pathogen, switching to a saprotrophic lifestyle during later stages of infection. <it<M. perniciosa</it<, together with the related species <it<M. roreri</it<, are pathogens of aerial parts of the plant, an uncommon characteristic in the order Agaricales. A genome survey (1.9× coverage) of <it<M. perniciosa </it<was analyzed to evaluate the overall gene content of this phytopathogen.</p< <p<Results</p< <p<Genes encoding proteins involved in retrotransposition, reactive oxygen species (ROS) resistance, drug efflux transport and cell wall degradation were identified. The great number of genes encoding cytochrome P450 monooxygenases (1.15% of gene models) indicates that <it<M. perniciosa </it<has a great potential for detoxification, production of toxins and hormones; which may confer a high adaptive ability to the fungus. We have also discovered new genes encoding putative secreted polypeptides rich in cysteine, as well as genes related to methylotrophy and plant hormone biosynthesis (gibberellin and auxin). Analysis of gene families indicated that <it<M. perniciosa </it<have similar amounts of carboxylesterases and repertoires of plant cell wall degrading enzymes as other hemibiotrophic fungi. In addition, an approach for normalization of gene family data using incomplete genome data was developed and applied in <it<M. perniciosa </it<genome survey.</p< <p<Conclusion</p< <p<This genome survey gives an overview of the <it<M. perniciosa </it<genome, and reveals that a significant portion is involved in stress adaptation and plant necrosis, two necessary characteristics for a hemibiotrophic fungus to fulfill its infection cycle. 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TP248.13-248.65 QH426-470 A genome survey of <it<Moniliophthora perniciosa </it<gives new insights into Witches' Broom Disease of cacao |
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Bailey Bryan A Guiltinan Mark J Barbosa Luciana V Neto Aristóteles Neto José Gonçalves Marilda S Gramacho Karina P Castro Luis AB de Moraes Marcos H Araújo Marcos Rio Maria Pires Acássia BL de Oliveira Bruno V Thomazella Daniela PT García Odalys Estrela Raíssa C Vidal Ramon O Carrer Helaine Cunha Anderson F Carraro Dirce M Cotomacci Carolina Rincones Johana Parizzi Lucas P Formighieri Eduardo F Costa Gustavo GL Carazzolle Marcelo F Mondego Jorge MC Meinhardt Lyndel W Cascardo Julio CM Pereira Gonçalo AG |
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genome survey of <it<moniliophthora perniciosa </it<gives new insights into witches' broom disease of cacao |
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A genome survey of <it<Moniliophthora perniciosa </it<gives new insights into Witches' Broom Disease of cacao |
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<p<Abstract</p< <p<Background</p< <p<The basidiomycete fungus <it<Moniliophthora perniciosa </it<is the causal agent of Witches' Broom Disease (WBD) in cacao (<it<Theobroma cacao</it<). It is a hemibiotrophic pathogen that colonizes the apoplast of cacao's meristematic tissues as a biotrophic pathogen, switching to a saprotrophic lifestyle during later stages of infection. <it<M. perniciosa</it<, together with the related species <it<M. roreri</it<, are pathogens of aerial parts of the plant, an uncommon characteristic in the order Agaricales. A genome survey (1.9× coverage) of <it<M. perniciosa </it<was analyzed to evaluate the overall gene content of this phytopathogen.</p< <p<Results</p< <p<Genes encoding proteins involved in retrotransposition, reactive oxygen species (ROS) resistance, drug efflux transport and cell wall degradation were identified. The great number of genes encoding cytochrome P450 monooxygenases (1.15% of gene models) indicates that <it<M. perniciosa </it<has a great potential for detoxification, production of toxins and hormones; which may confer a high adaptive ability to the fungus. We have also discovered new genes encoding putative secreted polypeptides rich in cysteine, as well as genes related to methylotrophy and plant hormone biosynthesis (gibberellin and auxin). Analysis of gene families indicated that <it<M. perniciosa </it<have similar amounts of carboxylesterases and repertoires of plant cell wall degrading enzymes as other hemibiotrophic fungi. In addition, an approach for normalization of gene family data using incomplete genome data was developed and applied in <it<M. perniciosa </it<genome survey.</p< <p<Conclusion</p< <p<This genome survey gives an overview of the <it<M. perniciosa </it<genome, and reveals that a significant portion is involved in stress adaptation and plant necrosis, two necessary characteristics for a hemibiotrophic fungus to fulfill its infection cycle. Our analysis provides new evidence revealing potential adaptive traits that may play major roles in the mechanisms of pathogenicity in the <it<M. perniciosa</it</cacao pathosystem.</p< |
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<p<Abstract</p< <p<Background</p< <p<The basidiomycete fungus <it<Moniliophthora perniciosa </it<is the causal agent of Witches' Broom Disease (WBD) in cacao (<it<Theobroma cacao</it<). It is a hemibiotrophic pathogen that colonizes the apoplast of cacao's meristematic tissues as a biotrophic pathogen, switching to a saprotrophic lifestyle during later stages of infection. <it<M. perniciosa</it<, together with the related species <it<M. roreri</it<, are pathogens of aerial parts of the plant, an uncommon characteristic in the order Agaricales. A genome survey (1.9× coverage) of <it<M. perniciosa </it<was analyzed to evaluate the overall gene content of this phytopathogen.</p< <p<Results</p< <p<Genes encoding proteins involved in retrotransposition, reactive oxygen species (ROS) resistance, drug efflux transport and cell wall degradation were identified. The great number of genes encoding cytochrome P450 monooxygenases (1.15% of gene models) indicates that <it<M. perniciosa </it<has a great potential for detoxification, production of toxins and hormones; which may confer a high adaptive ability to the fungus. We have also discovered new genes encoding putative secreted polypeptides rich in cysteine, as well as genes related to methylotrophy and plant hormone biosynthesis (gibberellin and auxin). Analysis of gene families indicated that <it<M. perniciosa </it<have similar amounts of carboxylesterases and repertoires of plant cell wall degrading enzymes as other hemibiotrophic fungi. In addition, an approach for normalization of gene family data using incomplete genome data was developed and applied in <it<M. perniciosa </it<genome survey.</p< <p<Conclusion</p< <p<This genome survey gives an overview of the <it<M. perniciosa </it<genome, and reveals that a significant portion is involved in stress adaptation and plant necrosis, two necessary characteristics for a hemibiotrophic fungus to fulfill its infection cycle. Our analysis provides new evidence revealing potential adaptive traits that may play major roles in the mechanisms of pathogenicity in the <it<M. perniciosa</it</cacao pathosystem.</p< |
| abstract_unstemmed |
<p<Abstract</p< <p<Background</p< <p<The basidiomycete fungus <it<Moniliophthora perniciosa </it<is the causal agent of Witches' Broom Disease (WBD) in cacao (<it<Theobroma cacao</it<). It is a hemibiotrophic pathogen that colonizes the apoplast of cacao's meristematic tissues as a biotrophic pathogen, switching to a saprotrophic lifestyle during later stages of infection. <it<M. perniciosa</it<, together with the related species <it<M. roreri</it<, are pathogens of aerial parts of the plant, an uncommon characteristic in the order Agaricales. A genome survey (1.9× coverage) of <it<M. perniciosa </it<was analyzed to evaluate the overall gene content of this phytopathogen.</p< <p<Results</p< <p<Genes encoding proteins involved in retrotransposition, reactive oxygen species (ROS) resistance, drug efflux transport and cell wall degradation were identified. The great number of genes encoding cytochrome P450 monooxygenases (1.15% of gene models) indicates that <it<M. perniciosa </it<has a great potential for detoxification, production of toxins and hormones; which may confer a high adaptive ability to the fungus. We have also discovered new genes encoding putative secreted polypeptides rich in cysteine, as well as genes related to methylotrophy and plant hormone biosynthesis (gibberellin and auxin). Analysis of gene families indicated that <it<M. perniciosa </it<have similar amounts of carboxylesterases and repertoires of plant cell wall degrading enzymes as other hemibiotrophic fungi. In addition, an approach for normalization of gene family data using incomplete genome data was developed and applied in <it<M. perniciosa </it<genome survey.</p< <p<Conclusion</p< <p<This genome survey gives an overview of the <it<M. perniciosa </it<genome, and reveals that a significant portion is involved in stress adaptation and plant necrosis, two necessary characteristics for a hemibiotrophic fungus to fulfill its infection cycle. Our analysis provides new evidence revealing potential adaptive traits that may play major roles in the mechanisms of pathogenicity in the <it<M. perniciosa</it</cacao pathosystem.</p< |
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1, p 548 |
| title_short |
A genome survey of <it<Moniliophthora perniciosa </it<gives new insights into Witches' Broom Disease of cacao |
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https://doi.org/10.1186/1471-2164-9-548 https://doaj.org/article/53735bdf22db4018927c184ec08eda9b http://www.biomedcentral.com/1471-2164/9/548 https://doaj.org/toc/1471-2164 |
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Guiltinan Mark J Barbosa Luciana V Neto Aristóteles Neto José Gonçalves Marilda S Gramacho Karina P Castro Luis AB de Moraes Marcos H Araújo Marcos Rio Maria Pires Acássia BL de Oliveira Bruno V Thomazella Daniela PT García Odalys Estrela Raíssa C Vidal Ramon O Carrer Helaine Cunha Anderson F Carraro Dirce M Cotomacci Carolina Rincones Johana Parizzi Lucas P Formighieri Eduardo F Costa Gustavo GL Carazzolle Marcelo F Mondego Jorge MC Meinhardt Lyndel W Cascardo Julio CM Pereira Gonçalo AG |
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Guiltinan Mark J Barbosa Luciana V Neto Aristóteles Neto José Gonçalves Marilda S Gramacho Karina P Castro Luis AB de Moraes Marcos H Araújo Marcos Rio Maria Pires Acássia BL de Oliveira Bruno V Thomazella Daniela PT García Odalys Estrela Raíssa C Vidal Ramon O Carrer Helaine Cunha Anderson F Carraro Dirce M Cotomacci Carolina Rincones Johana Parizzi Lucas P Formighieri Eduardo F Costa Gustavo GL Carazzolle Marcelo F Mondego Jorge MC Meinhardt Lyndel W Cascardo Julio CM Pereira Gonçalo AG |
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10.1186/1471-2164-9-548 |
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2024-07-04T01:38:56.744Z |
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| score |
7.4017773 |