Analysis of Microsatellite DNA Markers Reveals no Genetic Differentiation between Wild and Hatchery Populations of Pacific Threadfin in Hawaii
<p<Pacific threadfin, <i<Polydactylus sexfilis</i<, is popular fish in recreational fishing, as well as aquaculture in Hawaii. Its natural population has been continuously declining in the past several decades. Microsatellite DNA markers are useful DNA-based tool for monitoring Pac...
Ausführliche Beschreibung
Gespeichert in:
| Autor*in: |
Gang Pan, Jinzeng Yang [verfasserIn] |
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| Format: |
E-Artikel |
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| Sprache: |
Englisch |
| Erschienen: |
2010 |
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| Übergeordnetes Werk: |
In: International Journal of Biological Sciences - Ivyspring International Publisher, 2018, 6(2010), 7, Seite 827-833 |
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| Übergeordnetes Werk: |
volume:6 ; year:2010 ; number:7 ; pages:827-833 |
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DOAJ049084097 |
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(DE-627)DOAJ049084097 (DE-599)DOAJ1841d345b07241b78c00fc7fdf8bb24a DE-627 ger DE-627 rakwb eng QH301-705.5 Gang Pan, Jinzeng Yang verfasserin aut Analysis of Microsatellite DNA Markers Reveals no Genetic Differentiation between Wild and Hatchery Populations of Pacific Threadfin in Hawaii 2010 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Pacific threadfin, <i<Polydactylus sexfilis</i<, is popular fish in recreational fishing, as well as aquaculture in Hawaii. Its natural population has been continuously declining in the past several decades. Microsatellite DNA markers are useful DNA-based tool for monitoring Pacific threadfin populations. In this study, fifteen Microsatellite (MS) DNA markers were identified from a partial genomic Pacific threadfin DNA library enriched in CA repeats, and six highly-polymorphic microsatellite loci were employed to analyze genetic similarity and differences between the wild population and hatchery population in Oahu Island. A total of 37 alleles were detected at the six MS loci in the two populations. Statistical analysis of fixation index (F<sub<ST</sub<) and analysis of molecular variance (AMOVA) showed no genetic differentiation between the wild and hatchery populations (F<sub<ST</sub<=0.001, CI<sub<95%</sub<= -0.01-0.021). Both high genetic diversity (H<sub<o</sub<=0.664-0.674 and H<sub<e</sub<=0.710-0.715) and Hardy-Weinberg equilibrium were observed in the wild and hatchery populations. Results of genetic bottleneck analysis indicated that the hatchery was founded with sufficient numbers of brooders as inbreeding coefficient is very low (F<sub<IS</sub<=0.052-0.072) in both wild and hatchery populations. Further studies are needed for comprehensive determinations of genetic varieties of primary founder broodstocks and successive offspring of the hatchery and wild populations with increased number of Pacific threadfin sample collections.</p< Biology (General) In International Journal of Biological Sciences Ivyspring International Publisher, 2018 6(2010), 7, Seite 827-833 (DE-627)480660425 (DE-600)2179208-2 14492288 nnns volume:6 year:2010 number:7 pages:827-833 https://doaj.org/article/1841d345b07241b78c00fc7fdf8bb24a kostenfrei http://www.biolsci.org/v06p0827.htm kostenfrei https://doaj.org/toc/1449-2288 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 6 2010 7 827-833 |
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(DE-627)DOAJ049084097 (DE-599)DOAJ1841d345b07241b78c00fc7fdf8bb24a DE-627 ger DE-627 rakwb eng QH301-705.5 Gang Pan, Jinzeng Yang verfasserin aut Analysis of Microsatellite DNA Markers Reveals no Genetic Differentiation between Wild and Hatchery Populations of Pacific Threadfin in Hawaii 2010 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Pacific threadfin, <i<Polydactylus sexfilis</i<, is popular fish in recreational fishing, as well as aquaculture in Hawaii. Its natural population has been continuously declining in the past several decades. Microsatellite DNA markers are useful DNA-based tool for monitoring Pacific threadfin populations. In this study, fifteen Microsatellite (MS) DNA markers were identified from a partial genomic Pacific threadfin DNA library enriched in CA repeats, and six highly-polymorphic microsatellite loci were employed to analyze genetic similarity and differences between the wild population and hatchery population in Oahu Island. A total of 37 alleles were detected at the six MS loci in the two populations. Statistical analysis of fixation index (F<sub<ST</sub<) and analysis of molecular variance (AMOVA) showed no genetic differentiation between the wild and hatchery populations (F<sub<ST</sub<=0.001, CI<sub<95%</sub<= -0.01-0.021). Both high genetic diversity (H<sub<o</sub<=0.664-0.674 and H<sub<e</sub<=0.710-0.715) and Hardy-Weinberg equilibrium were observed in the wild and hatchery populations. Results of genetic bottleneck analysis indicated that the hatchery was founded with sufficient numbers of brooders as inbreeding coefficient is very low (F<sub<IS</sub<=0.052-0.072) in both wild and hatchery populations. Further studies are needed for comprehensive determinations of genetic varieties of primary founder broodstocks and successive offspring of the hatchery and wild populations with increased number of Pacific threadfin sample collections.</p< Biology (General) In International Journal of Biological Sciences Ivyspring International Publisher, 2018 6(2010), 7, Seite 827-833 (DE-627)480660425 (DE-600)2179208-2 14492288 nnns volume:6 year:2010 number:7 pages:827-833 https://doaj.org/article/1841d345b07241b78c00fc7fdf8bb24a kostenfrei http://www.biolsci.org/v06p0827.htm kostenfrei https://doaj.org/toc/1449-2288 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 6 2010 7 827-833 |
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(DE-627)DOAJ049084097 (DE-599)DOAJ1841d345b07241b78c00fc7fdf8bb24a DE-627 ger DE-627 rakwb eng QH301-705.5 Gang Pan, Jinzeng Yang verfasserin aut Analysis of Microsatellite DNA Markers Reveals no Genetic Differentiation between Wild and Hatchery Populations of Pacific Threadfin in Hawaii 2010 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Pacific threadfin, <i<Polydactylus sexfilis</i<, is popular fish in recreational fishing, as well as aquaculture in Hawaii. Its natural population has been continuously declining in the past several decades. Microsatellite DNA markers are useful DNA-based tool for monitoring Pacific threadfin populations. In this study, fifteen Microsatellite (MS) DNA markers were identified from a partial genomic Pacific threadfin DNA library enriched in CA repeats, and six highly-polymorphic microsatellite loci were employed to analyze genetic similarity and differences between the wild population and hatchery population in Oahu Island. A total of 37 alleles were detected at the six MS loci in the two populations. Statistical analysis of fixation index (F<sub<ST</sub<) and analysis of molecular variance (AMOVA) showed no genetic differentiation between the wild and hatchery populations (F<sub<ST</sub<=0.001, CI<sub<95%</sub<= -0.01-0.021). Both high genetic diversity (H<sub<o</sub<=0.664-0.674 and H<sub<e</sub<=0.710-0.715) and Hardy-Weinberg equilibrium were observed in the wild and hatchery populations. Results of genetic bottleneck analysis indicated that the hatchery was founded with sufficient numbers of brooders as inbreeding coefficient is very low (F<sub<IS</sub<=0.052-0.072) in both wild and hatchery populations. Further studies are needed for comprehensive determinations of genetic varieties of primary founder broodstocks and successive offspring of the hatchery and wild populations with increased number of Pacific threadfin sample collections.</p< Biology (General) In International Journal of Biological Sciences Ivyspring International Publisher, 2018 6(2010), 7, Seite 827-833 (DE-627)480660425 (DE-600)2179208-2 14492288 nnns volume:6 year:2010 number:7 pages:827-833 https://doaj.org/article/1841d345b07241b78c00fc7fdf8bb24a kostenfrei http://www.biolsci.org/v06p0827.htm kostenfrei https://doaj.org/toc/1449-2288 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 6 2010 7 827-833 |
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(DE-627)DOAJ049084097 (DE-599)DOAJ1841d345b07241b78c00fc7fdf8bb24a DE-627 ger DE-627 rakwb eng QH301-705.5 Gang Pan, Jinzeng Yang verfasserin aut Analysis of Microsatellite DNA Markers Reveals no Genetic Differentiation between Wild and Hatchery Populations of Pacific Threadfin in Hawaii 2010 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Pacific threadfin, <i<Polydactylus sexfilis</i<, is popular fish in recreational fishing, as well as aquaculture in Hawaii. Its natural population has been continuously declining in the past several decades. Microsatellite DNA markers are useful DNA-based tool for monitoring Pacific threadfin populations. In this study, fifteen Microsatellite (MS) DNA markers were identified from a partial genomic Pacific threadfin DNA library enriched in CA repeats, and six highly-polymorphic microsatellite loci were employed to analyze genetic similarity and differences between the wild population and hatchery population in Oahu Island. A total of 37 alleles were detected at the six MS loci in the two populations. Statistical analysis of fixation index (F<sub<ST</sub<) and analysis of molecular variance (AMOVA) showed no genetic differentiation between the wild and hatchery populations (F<sub<ST</sub<=0.001, CI<sub<95%</sub<= -0.01-0.021). Both high genetic diversity (H<sub<o</sub<=0.664-0.674 and H<sub<e</sub<=0.710-0.715) and Hardy-Weinberg equilibrium were observed in the wild and hatchery populations. Results of genetic bottleneck analysis indicated that the hatchery was founded with sufficient numbers of brooders as inbreeding coefficient is very low (F<sub<IS</sub<=0.052-0.072) in both wild and hatchery populations. Further studies are needed for comprehensive determinations of genetic varieties of primary founder broodstocks and successive offspring of the hatchery and wild populations with increased number of Pacific threadfin sample collections.</p< Biology (General) In International Journal of Biological Sciences Ivyspring International Publisher, 2018 6(2010), 7, Seite 827-833 (DE-627)480660425 (DE-600)2179208-2 14492288 nnns volume:6 year:2010 number:7 pages:827-833 https://doaj.org/article/1841d345b07241b78c00fc7fdf8bb24a kostenfrei http://www.biolsci.org/v06p0827.htm kostenfrei https://doaj.org/toc/1449-2288 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 6 2010 7 827-833 |
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(DE-627)DOAJ049084097 (DE-599)DOAJ1841d345b07241b78c00fc7fdf8bb24a DE-627 ger DE-627 rakwb eng QH301-705.5 Gang Pan, Jinzeng Yang verfasserin aut Analysis of Microsatellite DNA Markers Reveals no Genetic Differentiation between Wild and Hatchery Populations of Pacific Threadfin in Hawaii 2010 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Pacific threadfin, <i<Polydactylus sexfilis</i<, is popular fish in recreational fishing, as well as aquaculture in Hawaii. Its natural population has been continuously declining in the past several decades. Microsatellite DNA markers are useful DNA-based tool for monitoring Pacific threadfin populations. In this study, fifteen Microsatellite (MS) DNA markers were identified from a partial genomic Pacific threadfin DNA library enriched in CA repeats, and six highly-polymorphic microsatellite loci were employed to analyze genetic similarity and differences between the wild population and hatchery population in Oahu Island. A total of 37 alleles were detected at the six MS loci in the two populations. Statistical analysis of fixation index (F<sub<ST</sub<) and analysis of molecular variance (AMOVA) showed no genetic differentiation between the wild and hatchery populations (F<sub<ST</sub<=0.001, CI<sub<95%</sub<= -0.01-0.021). Both high genetic diversity (H<sub<o</sub<=0.664-0.674 and H<sub<e</sub<=0.710-0.715) and Hardy-Weinberg equilibrium were observed in the wild and hatchery populations. Results of genetic bottleneck analysis indicated that the hatchery was founded with sufficient numbers of brooders as inbreeding coefficient is very low (F<sub<IS</sub<=0.052-0.072) in both wild and hatchery populations. Further studies are needed for comprehensive determinations of genetic varieties of primary founder broodstocks and successive offspring of the hatchery and wild populations with increased number of Pacific threadfin sample collections.</p< Biology (General) In International Journal of Biological Sciences Ivyspring International Publisher, 2018 6(2010), 7, Seite 827-833 (DE-627)480660425 (DE-600)2179208-2 14492288 nnns volume:6 year:2010 number:7 pages:827-833 https://doaj.org/article/1841d345b07241b78c00fc7fdf8bb24a kostenfrei http://www.biolsci.org/v06p0827.htm kostenfrei https://doaj.org/toc/1449-2288 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 6 2010 7 827-833 |
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QH301-705.5 Analysis of Microsatellite DNA Markers Reveals no Genetic Differentiation between Wild and Hatchery Populations of Pacific Threadfin in Hawaii |
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analysis of microsatellite dna markers reveals no genetic differentiation between wild and hatchery populations of pacific threadfin in hawaii |
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Analysis of Microsatellite DNA Markers Reveals no Genetic Differentiation between Wild and Hatchery Populations of Pacific Threadfin in Hawaii |
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<p<Pacific threadfin, <i<Polydactylus sexfilis</i<, is popular fish in recreational fishing, as well as aquaculture in Hawaii. Its natural population has been continuously declining in the past several decades. Microsatellite DNA markers are useful DNA-based tool for monitoring Pacific threadfin populations. In this study, fifteen Microsatellite (MS) DNA markers were identified from a partial genomic Pacific threadfin DNA library enriched in CA repeats, and six highly-polymorphic microsatellite loci were employed to analyze genetic similarity and differences between the wild population and hatchery population in Oahu Island. A total of 37 alleles were detected at the six MS loci in the two populations. Statistical analysis of fixation index (F<sub<ST</sub<) and analysis of molecular variance (AMOVA) showed no genetic differentiation between the wild and hatchery populations (F<sub<ST</sub<=0.001, CI<sub<95%</sub<= -0.01-0.021). Both high genetic diversity (H<sub<o</sub<=0.664-0.674 and H<sub<e</sub<=0.710-0.715) and Hardy-Weinberg equilibrium were observed in the wild and hatchery populations. Results of genetic bottleneck analysis indicated that the hatchery was founded with sufficient numbers of brooders as inbreeding coefficient is very low (F<sub<IS</sub<=0.052-0.072) in both wild and hatchery populations. Further studies are needed for comprehensive determinations of genetic varieties of primary founder broodstocks and successive offspring of the hatchery and wild populations with increased number of Pacific threadfin sample collections.</p< |
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<p<Pacific threadfin, <i<Polydactylus sexfilis</i<, is popular fish in recreational fishing, as well as aquaculture in Hawaii. Its natural population has been continuously declining in the past several decades. Microsatellite DNA markers are useful DNA-based tool for monitoring Pacific threadfin populations. In this study, fifteen Microsatellite (MS) DNA markers were identified from a partial genomic Pacific threadfin DNA library enriched in CA repeats, and six highly-polymorphic microsatellite loci were employed to analyze genetic similarity and differences between the wild population and hatchery population in Oahu Island. A total of 37 alleles were detected at the six MS loci in the two populations. Statistical analysis of fixation index (F<sub<ST</sub<) and analysis of molecular variance (AMOVA) showed no genetic differentiation between the wild and hatchery populations (F<sub<ST</sub<=0.001, CI<sub<95%</sub<= -0.01-0.021). Both high genetic diversity (H<sub<o</sub<=0.664-0.674 and H<sub<e</sub<=0.710-0.715) and Hardy-Weinberg equilibrium were observed in the wild and hatchery populations. Results of genetic bottleneck analysis indicated that the hatchery was founded with sufficient numbers of brooders as inbreeding coefficient is very low (F<sub<IS</sub<=0.052-0.072) in both wild and hatchery populations. Further studies are needed for comprehensive determinations of genetic varieties of primary founder broodstocks and successive offspring of the hatchery and wild populations with increased number of Pacific threadfin sample collections.</p< |
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<p<Pacific threadfin, <i<Polydactylus sexfilis</i<, is popular fish in recreational fishing, as well as aquaculture in Hawaii. Its natural population has been continuously declining in the past several decades. Microsatellite DNA markers are useful DNA-based tool for monitoring Pacific threadfin populations. In this study, fifteen Microsatellite (MS) DNA markers were identified from a partial genomic Pacific threadfin DNA library enriched in CA repeats, and six highly-polymorphic microsatellite loci were employed to analyze genetic similarity and differences between the wild population and hatchery population in Oahu Island. A total of 37 alleles were detected at the six MS loci in the two populations. Statistical analysis of fixation index (F<sub<ST</sub<) and analysis of molecular variance (AMOVA) showed no genetic differentiation between the wild and hatchery populations (F<sub<ST</sub<=0.001, CI<sub<95%</sub<= -0.01-0.021). Both high genetic diversity (H<sub<o</sub<=0.664-0.674 and H<sub<e</sub<=0.710-0.715) and Hardy-Weinberg equilibrium were observed in the wild and hatchery populations. Results of genetic bottleneck analysis indicated that the hatchery was founded with sufficient numbers of brooders as inbreeding coefficient is very low (F<sub<IS</sub<=0.052-0.072) in both wild and hatchery populations. Further studies are needed for comprehensive determinations of genetic varieties of primary founder broodstocks and successive offspring of the hatchery and wild populations with increased number of Pacific threadfin sample collections.</p< |
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