The roles of rice microRNAs in rice-Magnaporthe oryzae interaction

Abstract MicroRNAs (miRNAs) are a class of small (20–24 nucleotides (nt) long) non-coding RNAs. One mature miRNA can be transcribed from one or more gene loci known as miRNA genes (MIRs). The transcript of a MIR forms a stem-loop structure that is processed into a 20–24-nt miRNA-5p/−3p duplex by RNa...
Ausführliche Beschreibung

Gespeichert in:

Autor*in:	Yan Li [verfasserIn] John Martin Jerome Jeyakumar [verfasserIn] Qin Feng [verfasserIn] Zhi-Xue Zhao [verfasserIn] Jing Fan [verfasserIn] Muhammad Ibrahim Khaskheli [verfasserIn] Wen-Ming Wang [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2019

Schlagwörter:	Dicer-like 1 MicroRNA miR164 miR167 miR169 miR319

Übergeordnetes Werk:	In: Phytopathology Research - BMC, 2019, 1(2019), 1, Seite 12
Übergeordnetes Werk:	volume:1 ; year:2019 ; number:1 ; pages:12

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.1186/s42483-019-0040-8

Katalog-ID:	DOAJ052899047

Internformat


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spelling	10.1186/s42483-019-0040-8 doi (DE-627)DOAJ052899047 (DE-599)DOAJ501f8d7544e34f40a8f39d321a38582e DE-627 ger DE-627 rakwb eng SB1-1110 Yan Li verfasserin aut The roles of rice microRNAs in rice-Magnaporthe oryzae interaction 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract MicroRNAs (miRNAs) are a class of small (20–24 nucleotides (nt) long) non-coding RNAs. One mature miRNA can be transcribed from one or more gene loci known as miRNA genes (MIRs). The transcript of a MIR forms a stem-loop structure that is processed into a 20–24-nt miRNA-5p/−3p duplex by RNase III family endoribonucleases such as Dicer-like1 (DCL1). In turn, the overhang ends of the duplex are methylated by HUA ENHANCER 1 (HEN1), generating stabilized mature miRNAs. The mature miRNAs are loaded onto ARGONAUTE (AGO) proteins, forming a miRNA-induced gene silencing complex (miRISC). Then, the miRISC binds to target sites with sequences complementary to the miRNAs, leading to either cleavage or translational inhibition of the target mRNAs, or methylation of the target sequences, resulting in post-transcriptional and transcriptional gene silencing, respectively. In the past decade, more than 700 miRNAs have been identified in rice, a subset of which have been found to be responsive to the rice blast fungus, Magnaporthe oryzae, or its elicitors. Moreover, members of 10 miRNA families have been found to positively or negatively regulate rice defense against M. oryzae, namely miR160, miR164, miR166, miR167, miR169, miR319, miR396, miR398, miR444 and miR7695. This review summarizes the identification and functional characterization of the miRNAs, which respond to M. oryzae or its elicitors and describes the current understanding of the complicated but well-organized network in the context of rice-M. oryzae interaction. Dicer-like 1 MicroRNA miR164 miR167 miR169 miR319 Plant culture John Martin Jerome Jeyakumar verfasserin aut Qin Feng verfasserin aut Zhi-Xue Zhao verfasserin aut Jing Fan verfasserin aut Muhammad Ibrahim Khaskheli verfasserin aut Wen-Ming Wang verfasserin aut In Phytopathology Research BMC, 2019 1(2019), 1, Seite 12 (DE-627)104821978X 25244167 nnns volume:1 year:2019 number:1 pages:12 https://doi.org/10.1186/s42483-019-0040-8 kostenfrei https://doaj.org/article/501f8d7544e34f40a8f39d321a38582e kostenfrei http://link.springer.com/article/10.1186/s42483-019-0040-8 kostenfrei https://doaj.org/toc/2524-4167 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 1 2019 1 12
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allfieldsGer	10.1186/s42483-019-0040-8 doi (DE-627)DOAJ052899047 (DE-599)DOAJ501f8d7544e34f40a8f39d321a38582e DE-627 ger DE-627 rakwb eng SB1-1110 Yan Li verfasserin aut The roles of rice microRNAs in rice-Magnaporthe oryzae interaction 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract MicroRNAs (miRNAs) are a class of small (20–24 nucleotides (nt) long) non-coding RNAs. One mature miRNA can be transcribed from one or more gene loci known as miRNA genes (MIRs). The transcript of a MIR forms a stem-loop structure that is processed into a 20–24-nt miRNA-5p/−3p duplex by RNase III family endoribonucleases such as Dicer-like1 (DCL1). In turn, the overhang ends of the duplex are methylated by HUA ENHANCER 1 (HEN1), generating stabilized mature miRNAs. The mature miRNAs are loaded onto ARGONAUTE (AGO) proteins, forming a miRNA-induced gene silencing complex (miRISC). Then, the miRISC binds to target sites with sequences complementary to the miRNAs, leading to either cleavage or translational inhibition of the target mRNAs, or methylation of the target sequences, resulting in post-transcriptional and transcriptional gene silencing, respectively. In the past decade, more than 700 miRNAs have been identified in rice, a subset of which have been found to be responsive to the rice blast fungus, Magnaporthe oryzae, or its elicitors. Moreover, members of 10 miRNA families have been found to positively or negatively regulate rice defense against M. oryzae, namely miR160, miR164, miR166, miR167, miR169, miR319, miR396, miR398, miR444 and miR7695. This review summarizes the identification and functional characterization of the miRNAs, which respond to M. oryzae or its elicitors and describes the current understanding of the complicated but well-organized network in the context of rice-M. oryzae interaction. Dicer-like 1 MicroRNA miR164 miR167 miR169 miR319 Plant culture John Martin Jerome Jeyakumar verfasserin aut Qin Feng verfasserin aut Zhi-Xue Zhao verfasserin aut Jing Fan verfasserin aut Muhammad Ibrahim Khaskheli verfasserin aut Wen-Ming Wang verfasserin aut In Phytopathology Research BMC, 2019 1(2019), 1, Seite 12 (DE-627)104821978X 25244167 nnns volume:1 year:2019 number:1 pages:12 https://doi.org/10.1186/s42483-019-0040-8 kostenfrei https://doaj.org/article/501f8d7544e34f40a8f39d321a38582e kostenfrei http://link.springer.com/article/10.1186/s42483-019-0040-8 kostenfrei https://doaj.org/toc/2524-4167 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 1 2019 1 12
allfieldsSound	10.1186/s42483-019-0040-8 doi (DE-627)DOAJ052899047 (DE-599)DOAJ501f8d7544e34f40a8f39d321a38582e DE-627 ger DE-627 rakwb eng SB1-1110 Yan Li verfasserin aut The roles of rice microRNAs in rice-Magnaporthe oryzae interaction 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract MicroRNAs (miRNAs) are a class of small (20–24 nucleotides (nt) long) non-coding RNAs. One mature miRNA can be transcribed from one or more gene loci known as miRNA genes (MIRs). The transcript of a MIR forms a stem-loop structure that is processed into a 20–24-nt miRNA-5p/−3p duplex by RNase III family endoribonucleases such as Dicer-like1 (DCL1). In turn, the overhang ends of the duplex are methylated by HUA ENHANCER 1 (HEN1), generating stabilized mature miRNAs. The mature miRNAs are loaded onto ARGONAUTE (AGO) proteins, forming a miRNA-induced gene silencing complex (miRISC). Then, the miRISC binds to target sites with sequences complementary to the miRNAs, leading to either cleavage or translational inhibition of the target mRNAs, or methylation of the target sequences, resulting in post-transcriptional and transcriptional gene silencing, respectively. In the past decade, more than 700 miRNAs have been identified in rice, a subset of which have been found to be responsive to the rice blast fungus, Magnaporthe oryzae, or its elicitors. Moreover, members of 10 miRNA families have been found to positively or negatively regulate rice defense against M. oryzae, namely miR160, miR164, miR166, miR167, miR169, miR319, miR396, miR398, miR444 and miR7695. This review summarizes the identification and functional characterization of the miRNAs, which respond to M. oryzae or its elicitors and describes the current understanding of the complicated but well-organized network in the context of rice-M. oryzae interaction. Dicer-like 1 MicroRNA miR164 miR167 miR169 miR319 Plant culture John Martin Jerome Jeyakumar verfasserin aut Qin Feng verfasserin aut Zhi-Xue Zhao verfasserin aut Jing Fan verfasserin aut Muhammad Ibrahim Khaskheli verfasserin aut Wen-Ming Wang verfasserin aut In Phytopathology Research BMC, 2019 1(2019), 1, Seite 12 (DE-627)104821978X 25244167 nnns volume:1 year:2019 number:1 pages:12 https://doi.org/10.1186/s42483-019-0040-8 kostenfrei https://doaj.org/article/501f8d7544e34f40a8f39d321a38582e kostenfrei http://link.springer.com/article/10.1186/s42483-019-0040-8 kostenfrei https://doaj.org/toc/2524-4167 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 1 2019 1 12
language	English
source	In Phytopathology Research 1(2019), 1, Seite 12 volume:1 year:2019 number:1 pages:12
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topic_facet	Dicer-like 1 MicroRNA miR164 miR167 miR169 miR319 Plant culture
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authorswithroles_txt_mv	Yan Li @@aut@@ John Martin Jerome Jeyakumar @@aut@@ Qin Feng @@aut@@ Zhi-Xue Zhao @@aut@@ Jing Fan @@aut@@ Muhammad Ibrahim Khaskheli @@aut@@ Wen-Ming Wang @@aut@@
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callnumber-first	S - Agriculture
author	Yan Li
spellingShingle	Yan Li misc SB1-1110 misc Dicer-like 1 misc MicroRNA misc miR164 misc miR167 misc miR169 misc miR319 misc Plant culture The roles of rice microRNAs in rice-Magnaporthe oryzae interaction
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topic	misc SB1-1110 misc Dicer-like 1 misc MicroRNA misc miR164 misc miR167 misc miR169 misc miR319 misc Plant culture
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title	The roles of rice microRNAs in rice-Magnaporthe oryzae interaction
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title_full	The roles of rice microRNAs in rice-Magnaporthe oryzae interaction
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title_auth	The roles of rice microRNAs in rice-Magnaporthe oryzae interaction
abstract	Abstract MicroRNAs (miRNAs) are a class of small (20–24 nucleotides (nt) long) non-coding RNAs. One mature miRNA can be transcribed from one or more gene loci known as miRNA genes (MIRs). The transcript of a MIR forms a stem-loop structure that is processed into a 20–24-nt miRNA-5p/−3p duplex by RNase III family endoribonucleases such as Dicer-like1 (DCL1). In turn, the overhang ends of the duplex are methylated by HUA ENHANCER 1 (HEN1), generating stabilized mature miRNAs. The mature miRNAs are loaded onto ARGONAUTE (AGO) proteins, forming a miRNA-induced gene silencing complex (miRISC). Then, the miRISC binds to target sites with sequences complementary to the miRNAs, leading to either cleavage or translational inhibition of the target mRNAs, or methylation of the target sequences, resulting in post-transcriptional and transcriptional gene silencing, respectively. In the past decade, more than 700 miRNAs have been identified in rice, a subset of which have been found to be responsive to the rice blast fungus, Magnaporthe oryzae, or its elicitors. Moreover, members of 10 miRNA families have been found to positively or negatively regulate rice defense against M. oryzae, namely miR160, miR164, miR166, miR167, miR169, miR319, miR396, miR398, miR444 and miR7695. This review summarizes the identification and functional characterization of the miRNAs, which respond to M. oryzae or its elicitors and describes the current understanding of the complicated but well-organized network in the context of rice-M. oryzae interaction.
abstractGer	Abstract MicroRNAs (miRNAs) are a class of small (20–24 nucleotides (nt) long) non-coding RNAs. One mature miRNA can be transcribed from one or more gene loci known as miRNA genes (MIRs). The transcript of a MIR forms a stem-loop structure that is processed into a 20–24-nt miRNA-5p/−3p duplex by RNase III family endoribonucleases such as Dicer-like1 (DCL1). In turn, the overhang ends of the duplex are methylated by HUA ENHANCER 1 (HEN1), generating stabilized mature miRNAs. The mature miRNAs are loaded onto ARGONAUTE (AGO) proteins, forming a miRNA-induced gene silencing complex (miRISC). Then, the miRISC binds to target sites with sequences complementary to the miRNAs, leading to either cleavage or translational inhibition of the target mRNAs, or methylation of the target sequences, resulting in post-transcriptional and transcriptional gene silencing, respectively. In the past decade, more than 700 miRNAs have been identified in rice, a subset of which have been found to be responsive to the rice blast fungus, Magnaporthe oryzae, or its elicitors. Moreover, members of 10 miRNA families have been found to positively or negatively regulate rice defense against M. oryzae, namely miR160, miR164, miR166, miR167, miR169, miR319, miR396, miR398, miR444 and miR7695. This review summarizes the identification and functional characterization of the miRNAs, which respond to M. oryzae or its elicitors and describes the current understanding of the complicated but well-organized network in the context of rice-M. oryzae interaction.
abstract_unstemmed	Abstract MicroRNAs (miRNAs) are a class of small (20–24 nucleotides (nt) long) non-coding RNAs. One mature miRNA can be transcribed from one or more gene loci known as miRNA genes (MIRs). The transcript of a MIR forms a stem-loop structure that is processed into a 20–24-nt miRNA-5p/−3p duplex by RNase III family endoribonucleases such as Dicer-like1 (DCL1). In turn, the overhang ends of the duplex are methylated by HUA ENHANCER 1 (HEN1), generating stabilized mature miRNAs. The mature miRNAs are loaded onto ARGONAUTE (AGO) proteins, forming a miRNA-induced gene silencing complex (miRISC). Then, the miRISC binds to target sites with sequences complementary to the miRNAs, leading to either cleavage or translational inhibition of the target mRNAs, or methylation of the target sequences, resulting in post-transcriptional and transcriptional gene silencing, respectively. In the past decade, more than 700 miRNAs have been identified in rice, a subset of which have been found to be responsive to the rice blast fungus, Magnaporthe oryzae, or its elicitors. Moreover, members of 10 miRNA families have been found to positively or negatively regulate rice defense against M. oryzae, namely miR160, miR164, miR166, miR167, miR169, miR319, miR396, miR398, miR444 and miR7695. This review summarizes the identification and functional characterization of the miRNAs, which respond to M. oryzae or its elicitors and describes the current understanding of the complicated but well-organized network in the context of rice-M. oryzae interaction.
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title_short	The roles of rice microRNAs in rice-Magnaporthe oryzae interaction
url	https://doi.org/10.1186/s42483-019-0040-8 https://doaj.org/article/501f8d7544e34f40a8f39d321a38582e http://link.springer.com/article/10.1186/s42483-019-0040-8 https://doaj.org/toc/2524-4167
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The roles of rice microRNAs in rice-Magnaporthe oryzae interaction

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