Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin

The hydrothermal vent system is a typical chemosynthetic ecosystem in which microorganisms play essential roles in the geobiochemical cycling. Although it has been well recognized that the inorganic sulfur compounds are abundant and actively converted through chemosynthetic pathways, the sulfur budg...
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Gespeichert in:

Autor*in:	Ying eHe [verfasserIn] Xiaoyuan eFeng [verfasserIn] Jing eFang [verfasserIn] Yu eZhang [verfasserIn] Xiang eXiao [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2015

Schlagwörter:	Carbon Cycle Metagenome sulfur cycle hydrothermal vent microbiology metatranscriptome

Übergeordnetes Werk:	In: Frontiers in Microbiology - Frontiers Media S.A., 2011, 6(2015)
Übergeordnetes Werk:	volume:6 ; year:2015

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3389/fmicb.2015.01236

Katalog-ID:	DOAJ054681197

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spelling	10.3389/fmicb.2015.01236 doi (DE-627)DOAJ054681197 (DE-599)DOAJ9f8bd337086845d1ad79f1f4f90addb2 DE-627 ger DE-627 rakwb eng QR1-502 Ying eHe verfasserin aut Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The hydrothermal vent system is a typical chemosynthetic ecosystem in which microorganisms play essential roles in the geobiochemical cycling. Although it has been well recognized that the inorganic sulfur compounds are abundant and actively converted through chemosynthetic pathways, the sulfur budget in a hydrothermal vent is poorly characterized due to the complexity of microbial sulfur cycling resulting from the numerous parties involved in the processes. In this study, we performed an integrated metagenomic and metatranscriptomic analysis on a chimney sample from Guaymas Basin to achieve a comprehensive study of each sulfur metabolic pathway and its hosting microorganisms and constructed the microbial sulfur cycle that occurs in the site. Our results clearly illustrated the stratified sulfur oxidation and sulfate reduction at the chimney wall. Besides, sulfur metabolizing is closely interacting with carbon cycles, especially the hydrocarbon degradation process in Guaymas Basin. This work supports that the internal sulfur cycling is intensive and the net sulfur budget is low in the hydrothermal ecosystem. Carbon Cycle Metagenome sulfur cycle hydrothermal vent microbiology metatranscriptome Microbiology Ying eHe verfasserin aut Xiaoyuan eFeng verfasserin aut Jing eFang verfasserin aut Yu eZhang verfasserin aut Yu eZhang verfasserin aut Xiang eXiao verfasserin aut Xiang eXiao verfasserin aut Xiang eXiao verfasserin aut In Frontiers in Microbiology Frontiers Media S.A., 2011 6(2015) (DE-627)642889384 (DE-600)2587354-4 1664302X nnns volume:6 year:2015 https://doi.org/10.3389/fmicb.2015.01236 kostenfrei https://doaj.org/article/9f8bd337086845d1ad79f1f4f90addb2 kostenfrei http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01236/full kostenfrei https://doaj.org/toc/1664-302X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 6 2015
allfields_unstemmed	10.3389/fmicb.2015.01236 doi (DE-627)DOAJ054681197 (DE-599)DOAJ9f8bd337086845d1ad79f1f4f90addb2 DE-627 ger DE-627 rakwb eng QR1-502 Ying eHe verfasserin aut Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The hydrothermal vent system is a typical chemosynthetic ecosystem in which microorganisms play essential roles in the geobiochemical cycling. Although it has been well recognized that the inorganic sulfur compounds are abundant and actively converted through chemosynthetic pathways, the sulfur budget in a hydrothermal vent is poorly characterized due to the complexity of microbial sulfur cycling resulting from the numerous parties involved in the processes. In this study, we performed an integrated metagenomic and metatranscriptomic analysis on a chimney sample from Guaymas Basin to achieve a comprehensive study of each sulfur metabolic pathway and its hosting microorganisms and constructed the microbial sulfur cycle that occurs in the site. Our results clearly illustrated the stratified sulfur oxidation and sulfate reduction at the chimney wall. Besides, sulfur metabolizing is closely interacting with carbon cycles, especially the hydrocarbon degradation process in Guaymas Basin. This work supports that the internal sulfur cycling is intensive and the net sulfur budget is low in the hydrothermal ecosystem. Carbon Cycle Metagenome sulfur cycle hydrothermal vent microbiology metatranscriptome Microbiology Ying eHe verfasserin aut Xiaoyuan eFeng verfasserin aut Jing eFang verfasserin aut Yu eZhang verfasserin aut Yu eZhang verfasserin aut Xiang eXiao verfasserin aut Xiang eXiao verfasserin aut Xiang eXiao verfasserin aut In Frontiers in Microbiology Frontiers Media S.A., 2011 6(2015) (DE-627)642889384 (DE-600)2587354-4 1664302X nnns volume:6 year:2015 https://doi.org/10.3389/fmicb.2015.01236 kostenfrei https://doaj.org/article/9f8bd337086845d1ad79f1f4f90addb2 kostenfrei http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01236/full kostenfrei https://doaj.org/toc/1664-302X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 6 2015
allfieldsGer	10.3389/fmicb.2015.01236 doi (DE-627)DOAJ054681197 (DE-599)DOAJ9f8bd337086845d1ad79f1f4f90addb2 DE-627 ger DE-627 rakwb eng QR1-502 Ying eHe verfasserin aut Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The hydrothermal vent system is a typical chemosynthetic ecosystem in which microorganisms play essential roles in the geobiochemical cycling. Although it has been well recognized that the inorganic sulfur compounds are abundant and actively converted through chemosynthetic pathways, the sulfur budget in a hydrothermal vent is poorly characterized due to the complexity of microbial sulfur cycling resulting from the numerous parties involved in the processes. In this study, we performed an integrated metagenomic and metatranscriptomic analysis on a chimney sample from Guaymas Basin to achieve a comprehensive study of each sulfur metabolic pathway and its hosting microorganisms and constructed the microbial sulfur cycle that occurs in the site. Our results clearly illustrated the stratified sulfur oxidation and sulfate reduction at the chimney wall. Besides, sulfur metabolizing is closely interacting with carbon cycles, especially the hydrocarbon degradation process in Guaymas Basin. This work supports that the internal sulfur cycling is intensive and the net sulfur budget is low in the hydrothermal ecosystem. Carbon Cycle Metagenome sulfur cycle hydrothermal vent microbiology metatranscriptome Microbiology Ying eHe verfasserin aut Xiaoyuan eFeng verfasserin aut Jing eFang verfasserin aut Yu eZhang verfasserin aut Yu eZhang verfasserin aut Xiang eXiao verfasserin aut Xiang eXiao verfasserin aut Xiang eXiao verfasserin aut In Frontiers in Microbiology Frontiers Media S.A., 2011 6(2015) (DE-627)642889384 (DE-600)2587354-4 1664302X nnns volume:6 year:2015 https://doi.org/10.3389/fmicb.2015.01236 kostenfrei https://doaj.org/article/9f8bd337086845d1ad79f1f4f90addb2 kostenfrei http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01236/full kostenfrei https://doaj.org/toc/1664-302X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 6 2015
allfieldsSound	10.3389/fmicb.2015.01236 doi (DE-627)DOAJ054681197 (DE-599)DOAJ9f8bd337086845d1ad79f1f4f90addb2 DE-627 ger DE-627 rakwb eng QR1-502 Ying eHe verfasserin aut Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The hydrothermal vent system is a typical chemosynthetic ecosystem in which microorganisms play essential roles in the geobiochemical cycling. Although it has been well recognized that the inorganic sulfur compounds are abundant and actively converted through chemosynthetic pathways, the sulfur budget in a hydrothermal vent is poorly characterized due to the complexity of microbial sulfur cycling resulting from the numerous parties involved in the processes. In this study, we performed an integrated metagenomic and metatranscriptomic analysis on a chimney sample from Guaymas Basin to achieve a comprehensive study of each sulfur metabolic pathway and its hosting microorganisms and constructed the microbial sulfur cycle that occurs in the site. Our results clearly illustrated the stratified sulfur oxidation and sulfate reduction at the chimney wall. Besides, sulfur metabolizing is closely interacting with carbon cycles, especially the hydrocarbon degradation process in Guaymas Basin. This work supports that the internal sulfur cycling is intensive and the net sulfur budget is low in the hydrothermal ecosystem. Carbon Cycle Metagenome sulfur cycle hydrothermal vent microbiology metatranscriptome Microbiology Ying eHe verfasserin aut Xiaoyuan eFeng verfasserin aut Jing eFang verfasserin aut Yu eZhang verfasserin aut Yu eZhang verfasserin aut Xiang eXiao verfasserin aut Xiang eXiao verfasserin aut Xiang eXiao verfasserin aut In Frontiers in Microbiology Frontiers Media S.A., 2011 6(2015) (DE-627)642889384 (DE-600)2587354-4 1664302X nnns volume:6 year:2015 https://doi.org/10.3389/fmicb.2015.01236 kostenfrei https://doaj.org/article/9f8bd337086845d1ad79f1f4f90addb2 kostenfrei http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01236/full kostenfrei https://doaj.org/toc/1664-302X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 6 2015
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container_title	Frontiers in Microbiology
authorswithroles_txt_mv	Ying eHe @@aut@@ Xiaoyuan eFeng @@aut@@ Jing eFang @@aut@@ Yu eZhang @@aut@@ Xiang eXiao @@aut@@
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author	Ying eHe
spellingShingle	Ying eHe misc QR1-502 misc Carbon Cycle misc Metagenome misc sulfur cycle misc hydrothermal vent microbiology misc metatranscriptome misc Microbiology Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin
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topic_title	QR1-502 Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin Carbon Cycle Metagenome sulfur cycle hydrothermal vent microbiology metatranscriptome
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title	Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin
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title_full	Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin
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title_sort	metagenome and metatranscriptome revealed a highly active sulfur cycle in an oil-immersed hydrothermal chimney in guaymas basin
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title_auth	Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin
abstract	The hydrothermal vent system is a typical chemosynthetic ecosystem in which microorganisms play essential roles in the geobiochemical cycling. Although it has been well recognized that the inorganic sulfur compounds are abundant and actively converted through chemosynthetic pathways, the sulfur budget in a hydrothermal vent is poorly characterized due to the complexity of microbial sulfur cycling resulting from the numerous parties involved in the processes. In this study, we performed an integrated metagenomic and metatranscriptomic analysis on a chimney sample from Guaymas Basin to achieve a comprehensive study of each sulfur metabolic pathway and its hosting microorganisms and constructed the microbial sulfur cycle that occurs in the site. Our results clearly illustrated the stratified sulfur oxidation and sulfate reduction at the chimney wall. Besides, sulfur metabolizing is closely interacting with carbon cycles, especially the hydrocarbon degradation process in Guaymas Basin. This work supports that the internal sulfur cycling is intensive and the net sulfur budget is low in the hydrothermal ecosystem.
abstractGer	The hydrothermal vent system is a typical chemosynthetic ecosystem in which microorganisms play essential roles in the geobiochemical cycling. Although it has been well recognized that the inorganic sulfur compounds are abundant and actively converted through chemosynthetic pathways, the sulfur budget in a hydrothermal vent is poorly characterized due to the complexity of microbial sulfur cycling resulting from the numerous parties involved in the processes. In this study, we performed an integrated metagenomic and metatranscriptomic analysis on a chimney sample from Guaymas Basin to achieve a comprehensive study of each sulfur metabolic pathway and its hosting microorganisms and constructed the microbial sulfur cycle that occurs in the site. Our results clearly illustrated the stratified sulfur oxidation and sulfate reduction at the chimney wall. Besides, sulfur metabolizing is closely interacting with carbon cycles, especially the hydrocarbon degradation process in Guaymas Basin. This work supports that the internal sulfur cycling is intensive and the net sulfur budget is low in the hydrothermal ecosystem.
abstract_unstemmed	The hydrothermal vent system is a typical chemosynthetic ecosystem in which microorganisms play essential roles in the geobiochemical cycling. Although it has been well recognized that the inorganic sulfur compounds are abundant and actively converted through chemosynthetic pathways, the sulfur budget in a hydrothermal vent is poorly characterized due to the complexity of microbial sulfur cycling resulting from the numerous parties involved in the processes. In this study, we performed an integrated metagenomic and metatranscriptomic analysis on a chimney sample from Guaymas Basin to achieve a comprehensive study of each sulfur metabolic pathway and its hosting microorganisms and constructed the microbial sulfur cycle that occurs in the site. Our results clearly illustrated the stratified sulfur oxidation and sulfate reduction at the chimney wall. Besides, sulfur metabolizing is closely interacting with carbon cycles, especially the hydrocarbon degradation process in Guaymas Basin. This work supports that the internal sulfur cycling is intensive and the net sulfur budget is low in the hydrothermal ecosystem.
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title_short	Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin
url	https://doi.org/10.3389/fmicb.2015.01236 https://doaj.org/article/9f8bd337086845d1ad79f1f4f90addb2 http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01236/full https://doaj.org/toc/1664-302X
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Metagenome and Metatranscriptome Revealed a Highly Active Sulfur Cycle in an Oil-Immersed Hydrothermal Chimney in Guaymas Basin

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