Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis

In order to improve the effectiveness of breeding practices for Prunus rootstocks, it is essential to obtain new resistance resources, especially with regard to drought. In this study, a collection of field-grown Prunus genotypes, both wild-relative species and cultivated hybrid rootstocks, were sub...
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Autor*in:	Beatriz Bielsa [verfasserIn] Carole Bassett [verfasserIn] D. Michael Glenn [verfasserIn] María José Rubio-Cabetas [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2018

Schlagwörter:	almond wild-relative species ash content DREB2B transcription factor peach wild-relative species PpDhn2 rootstock water use efficiency

Übergeordnetes Werk:	In: Agronomy - MDPI AG, 2012, 8(2018), 4, p 42
Übergeordnetes Werk:	volume:8 ; year:2018 ; number:4, p 42

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3390/agronomy8040042

Katalog-ID:	DOAJ062146874

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520			\|a In order to improve the effectiveness of breeding practices for Prunus rootstocks, it is essential to obtain new resistance resources, especially with regard to drought. In this study, a collection of field-grown Prunus genotypes, both wild-relative species and cultivated hybrid rootstocks, were subjected to leaf ash and carbon isotope discrimination (Δ13C) analyses, which are strongly correlated to water use efficiency (WUE). Almond and peach wild relative species showed the lowest Δ13C ratios, and therefore, the highest WUE in comparison with hybrid genotypes. In addition, drought-related cis-regulatory elements (CREs) were identified in the promoter regions of the effector gene PpDhn2, and the transcription factor gene DREB2B, two genes involved in drought-response signaling pathways. The phylogenetic analysis of these regions revealed variability in the promoter region sequences of both genes. This finding provides evidence of genetic diversity between the peach- and almond-relative individuals. The results presented here can be used to select Prunus genotypes with the best drought resistance potential for breeding.
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allfields	10.3390/agronomy8040042 doi (DE-627)DOAJ062146874 (DE-599)DOAJfc002cfb991a410a9b8e4e2ef01a3551 DE-627 ger DE-627 rakwb eng Beatriz Bielsa verfasserin aut Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier In order to improve the effectiveness of breeding practices for Prunus rootstocks, it is essential to obtain new resistance resources, especially with regard to drought. In this study, a collection of field-grown Prunus genotypes, both wild-relative species and cultivated hybrid rootstocks, were subjected to leaf ash and carbon isotope discrimination (Δ13C) analyses, which are strongly correlated to water use efficiency (WUE). Almond and peach wild relative species showed the lowest Δ13C ratios, and therefore, the highest WUE in comparison with hybrid genotypes. In addition, drought-related cis-regulatory elements (CREs) were identified in the promoter regions of the effector gene PpDhn2, and the transcription factor gene DREB2B, two genes involved in drought-response signaling pathways. The phylogenetic analysis of these regions revealed variability in the promoter region sequences of both genes. This finding provides evidence of genetic diversity between the peach- and almond-relative individuals. The results presented here can be used to select Prunus genotypes with the best drought resistance potential for breeding. almond wild-relative species ash content DREB2B transcription factor peach wild-relative species PpDhn2 rootstock water use efficiency Agriculture S Carole Bassett verfasserin aut D. Michael Glenn verfasserin aut María José Rubio-Cabetas verfasserin aut In Agronomy MDPI AG, 2012 8(2018), 4, p 42 (DE-627)658000543 (DE-600)2607043-1 20734395 nnns volume:8 year:2018 number:4, p 42 https://doi.org/10.3390/agronomy8040042 kostenfrei https://doaj.org/article/fc002cfb991a410a9b8e4e2ef01a3551 kostenfrei http://www.mdpi.com/2073-4395/8/4/42 kostenfrei https://doaj.org/toc/2073-4395 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2018 4, p 42
spelling	10.3390/agronomy8040042 doi (DE-627)DOAJ062146874 (DE-599)DOAJfc002cfb991a410a9b8e4e2ef01a3551 DE-627 ger DE-627 rakwb eng Beatriz Bielsa verfasserin aut Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier In order to improve the effectiveness of breeding practices for Prunus rootstocks, it is essential to obtain new resistance resources, especially with regard to drought. In this study, a collection of field-grown Prunus genotypes, both wild-relative species and cultivated hybrid rootstocks, were subjected to leaf ash and carbon isotope discrimination (Δ13C) analyses, which are strongly correlated to water use efficiency (WUE). Almond and peach wild relative species showed the lowest Δ13C ratios, and therefore, the highest WUE in comparison with hybrid genotypes. In addition, drought-related cis-regulatory elements (CREs) were identified in the promoter regions of the effector gene PpDhn2, and the transcription factor gene DREB2B, two genes involved in drought-response signaling pathways. The phylogenetic analysis of these regions revealed variability in the promoter region sequences of both genes. This finding provides evidence of genetic diversity between the peach- and almond-relative individuals. The results presented here can be used to select Prunus genotypes with the best drought resistance potential for breeding. almond wild-relative species ash content DREB2B transcription factor peach wild-relative species PpDhn2 rootstock water use efficiency Agriculture S Carole Bassett verfasserin aut D. Michael Glenn verfasserin aut María José Rubio-Cabetas verfasserin aut In Agronomy MDPI AG, 2012 8(2018), 4, p 42 (DE-627)658000543 (DE-600)2607043-1 20734395 nnns volume:8 year:2018 number:4, p 42 https://doi.org/10.3390/agronomy8040042 kostenfrei https://doaj.org/article/fc002cfb991a410a9b8e4e2ef01a3551 kostenfrei http://www.mdpi.com/2073-4395/8/4/42 kostenfrei https://doaj.org/toc/2073-4395 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2018 4, p 42
allfields_unstemmed	10.3390/agronomy8040042 doi (DE-627)DOAJ062146874 (DE-599)DOAJfc002cfb991a410a9b8e4e2ef01a3551 DE-627 ger DE-627 rakwb eng Beatriz Bielsa verfasserin aut Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier In order to improve the effectiveness of breeding practices for Prunus rootstocks, it is essential to obtain new resistance resources, especially with regard to drought. In this study, a collection of field-grown Prunus genotypes, both wild-relative species and cultivated hybrid rootstocks, were subjected to leaf ash and carbon isotope discrimination (Δ13C) analyses, which are strongly correlated to water use efficiency (WUE). Almond and peach wild relative species showed the lowest Δ13C ratios, and therefore, the highest WUE in comparison with hybrid genotypes. In addition, drought-related cis-regulatory elements (CREs) were identified in the promoter regions of the effector gene PpDhn2, and the transcription factor gene DREB2B, two genes involved in drought-response signaling pathways. The phylogenetic analysis of these regions revealed variability in the promoter region sequences of both genes. This finding provides evidence of genetic diversity between the peach- and almond-relative individuals. The results presented here can be used to select Prunus genotypes with the best drought resistance potential for breeding. almond wild-relative species ash content DREB2B transcription factor peach wild-relative species PpDhn2 rootstock water use efficiency Agriculture S Carole Bassett verfasserin aut D. Michael Glenn verfasserin aut María José Rubio-Cabetas verfasserin aut In Agronomy MDPI AG, 2012 8(2018), 4, p 42 (DE-627)658000543 (DE-600)2607043-1 20734395 nnns volume:8 year:2018 number:4, p 42 https://doi.org/10.3390/agronomy8040042 kostenfrei https://doaj.org/article/fc002cfb991a410a9b8e4e2ef01a3551 kostenfrei http://www.mdpi.com/2073-4395/8/4/42 kostenfrei https://doaj.org/toc/2073-4395 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2018 4, p 42
allfieldsGer	10.3390/agronomy8040042 doi (DE-627)DOAJ062146874 (DE-599)DOAJfc002cfb991a410a9b8e4e2ef01a3551 DE-627 ger DE-627 rakwb eng Beatriz Bielsa verfasserin aut Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier In order to improve the effectiveness of breeding practices for Prunus rootstocks, it is essential to obtain new resistance resources, especially with regard to drought. In this study, a collection of field-grown Prunus genotypes, both wild-relative species and cultivated hybrid rootstocks, were subjected to leaf ash and carbon isotope discrimination (Δ13C) analyses, which are strongly correlated to water use efficiency (WUE). Almond and peach wild relative species showed the lowest Δ13C ratios, and therefore, the highest WUE in comparison with hybrid genotypes. In addition, drought-related cis-regulatory elements (CREs) were identified in the promoter regions of the effector gene PpDhn2, and the transcription factor gene DREB2B, two genes involved in drought-response signaling pathways. The phylogenetic analysis of these regions revealed variability in the promoter region sequences of both genes. This finding provides evidence of genetic diversity between the peach- and almond-relative individuals. The results presented here can be used to select Prunus genotypes with the best drought resistance potential for breeding. almond wild-relative species ash content DREB2B transcription factor peach wild-relative species PpDhn2 rootstock water use efficiency Agriculture S Carole Bassett verfasserin aut D. Michael Glenn verfasserin aut María José Rubio-Cabetas verfasserin aut In Agronomy MDPI AG, 2012 8(2018), 4, p 42 (DE-627)658000543 (DE-600)2607043-1 20734395 nnns volume:8 year:2018 number:4, p 42 https://doi.org/10.3390/agronomy8040042 kostenfrei https://doaj.org/article/fc002cfb991a410a9b8e4e2ef01a3551 kostenfrei http://www.mdpi.com/2073-4395/8/4/42 kostenfrei https://doaj.org/toc/2073-4395 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2018 4, p 42
allfieldsSound	10.3390/agronomy8040042 doi (DE-627)DOAJ062146874 (DE-599)DOAJfc002cfb991a410a9b8e4e2ef01a3551 DE-627 ger DE-627 rakwb eng Beatriz Bielsa verfasserin aut Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier In order to improve the effectiveness of breeding practices for Prunus rootstocks, it is essential to obtain new resistance resources, especially with regard to drought. In this study, a collection of field-grown Prunus genotypes, both wild-relative species and cultivated hybrid rootstocks, were subjected to leaf ash and carbon isotope discrimination (Δ13C) analyses, which are strongly correlated to water use efficiency (WUE). Almond and peach wild relative species showed the lowest Δ13C ratios, and therefore, the highest WUE in comparison with hybrid genotypes. In addition, drought-related cis-regulatory elements (CREs) were identified in the promoter regions of the effector gene PpDhn2, and the transcription factor gene DREB2B, two genes involved in drought-response signaling pathways. The phylogenetic analysis of these regions revealed variability in the promoter region sequences of both genes. This finding provides evidence of genetic diversity between the peach- and almond-relative individuals. The results presented here can be used to select Prunus genotypes with the best drought resistance potential for breeding. almond wild-relative species ash content DREB2B transcription factor peach wild-relative species PpDhn2 rootstock water use efficiency Agriculture S Carole Bassett verfasserin aut D. Michael Glenn verfasserin aut María José Rubio-Cabetas verfasserin aut In Agronomy MDPI AG, 2012 8(2018), 4, p 42 (DE-627)658000543 (DE-600)2607043-1 20734395 nnns volume:8 year:2018 number:4, p 42 https://doi.org/10.3390/agronomy8040042 kostenfrei https://doaj.org/article/fc002cfb991a410a9b8e4e2ef01a3551 kostenfrei http://www.mdpi.com/2073-4395/8/4/42 kostenfrei https://doaj.org/toc/2073-4395 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2018 4, p 42
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author	Beatriz Bielsa
spellingShingle	Beatriz Bielsa misc almond wild-relative species misc ash content misc DREB2B transcription factor misc peach wild-relative species misc PpDhn2 misc rootstock misc water use efficiency misc Agriculture misc S Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis
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topic_title	Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis almond wild-relative species ash content DREB2B transcription factor peach wild-relative species PpDhn2 rootstock water use efficiency
topic	misc almond wild-relative species misc ash content misc DREB2B transcription factor misc peach wild-relative species misc PpDhn2 misc rootstock misc water use efficiency misc Agriculture misc S
topic_unstemmed	misc almond wild-relative species misc ash content misc DREB2B transcription factor misc peach wild-relative species misc PpDhn2 misc rootstock misc water use efficiency misc Agriculture misc S
topic_browse	misc almond wild-relative species misc ash content misc DREB2B transcription factor misc peach wild-relative species misc PpDhn2 misc rootstock misc water use efficiency misc Agriculture misc S
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title	Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis
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title_full	Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis
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title_sort	assessing field prunus genotypes for drought responsive potential by carbon isotope discrimination and promoter analysis
title_auth	Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis
abstract	In order to improve the effectiveness of breeding practices for Prunus rootstocks, it is essential to obtain new resistance resources, especially with regard to drought. In this study, a collection of field-grown Prunus genotypes, both wild-relative species and cultivated hybrid rootstocks, were subjected to leaf ash and carbon isotope discrimination (Δ13C) analyses, which are strongly correlated to water use efficiency (WUE). Almond and peach wild relative species showed the lowest Δ13C ratios, and therefore, the highest WUE in comparison with hybrid genotypes. In addition, drought-related cis-regulatory elements (CREs) were identified in the promoter regions of the effector gene PpDhn2, and the transcription factor gene DREB2B, two genes involved in drought-response signaling pathways. The phylogenetic analysis of these regions revealed variability in the promoter region sequences of both genes. This finding provides evidence of genetic diversity between the peach- and almond-relative individuals. The results presented here can be used to select Prunus genotypes with the best drought resistance potential for breeding.
abstractGer	In order to improve the effectiveness of breeding practices for Prunus rootstocks, it is essential to obtain new resistance resources, especially with regard to drought. In this study, a collection of field-grown Prunus genotypes, both wild-relative species and cultivated hybrid rootstocks, were subjected to leaf ash and carbon isotope discrimination (Δ13C) analyses, which are strongly correlated to water use efficiency (WUE). Almond and peach wild relative species showed the lowest Δ13C ratios, and therefore, the highest WUE in comparison with hybrid genotypes. In addition, drought-related cis-regulatory elements (CREs) were identified in the promoter regions of the effector gene PpDhn2, and the transcription factor gene DREB2B, two genes involved in drought-response signaling pathways. The phylogenetic analysis of these regions revealed variability in the promoter region sequences of both genes. This finding provides evidence of genetic diversity between the peach- and almond-relative individuals. The results presented here can be used to select Prunus genotypes with the best drought resistance potential for breeding.
abstract_unstemmed	In order to improve the effectiveness of breeding practices for Prunus rootstocks, it is essential to obtain new resistance resources, especially with regard to drought. In this study, a collection of field-grown Prunus genotypes, both wild-relative species and cultivated hybrid rootstocks, were subjected to leaf ash and carbon isotope discrimination (Δ13C) analyses, which are strongly correlated to water use efficiency (WUE). Almond and peach wild relative species showed the lowest Δ13C ratios, and therefore, the highest WUE in comparison with hybrid genotypes. In addition, drought-related cis-regulatory elements (CREs) were identified in the promoter regions of the effector gene PpDhn2, and the transcription factor gene DREB2B, two genes involved in drought-response signaling pathways. The phylogenetic analysis of these regions revealed variability in the promoter region sequences of both genes. This finding provides evidence of genetic diversity between the peach- and almond-relative individuals. The results presented here can be used to select Prunus genotypes with the best drought resistance potential for breeding.
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title_short	Assessing Field Prunus Genotypes for Drought Responsive Potential by Carbon Isotope Discrimination and Promoter Analysis
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