Expression Study of Banana Pathogenic Resistance Genes

Banana is one of the world's most important trade commodities. However, infection of banana pathogenic fungi (Fusarium oxysporum race 4) is one of the major causes of decreasing production in Indonesia. Genetic engineering has become an alternative way to control this problem by isolating genes...
Ausführliche Beschreibung

Gespeichert in:

Autor*in:	Fenny M. Dwivany [verfasserIn] Rizkita Rahmi Esyanti [verfasserIn] Aksarani 'Sa Pratiwi [verfasserIn] Herafi Zaskia [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch ; Indonesisch

Erschienen:	2016

Schlagwörter:	apoptosis inhibitor 5 (API5) Arabidopsis thaliana chitinase (ChiI1) Musa acuminata pathogen resistance

Übergeordnetes Werk:	In: Hayati Journal of Biosciences - Bogor Agricultural University, 2010, 23(2016), 4, Seite 196-199
Übergeordnetes Werk:	volume:23 ; year:2016 ; number:4 ; pages:196-199

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.1016/j.hjb.2016.06.007

Katalog-ID:	DOAJ064106837

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520			\|a Banana is one of the world's most important trade commodities. However, infection of banana pathogenic fungi (Fusarium oxysporum race 4) is one of the major causes of decreasing production in Indonesia. Genetic engineering has become an alternative way to control this problem by isolating genes that involved in plant defense mechanism against pathogens. Two of the important genes are API5 and ChiI1, each gene encodes apoptosis inhibitory protein and chitinase enzymes. The purpose of this study was to study the expression of API5 and ChiI1 genes as candidate pathogenic resistance genes. The amplified fragments were then cloned, sequenced, and confirmed with in silico studies. Based on sequence analysis, it is showed that partial API5 gene has putative transactivation domain and ChiI1 has 9 chitinase family GH19 protein motifs. Data obtained from this study will contribute in banana genetic improvement.
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spelling	10.1016/j.hjb.2016.06.007 doi (DE-627)DOAJ064106837 (DE-599)DOAJ3e475bc8ac3c4332b69461e2dcdda330 DE-627 ger DE-627 rakwb eng ind QH301-705.5 Fenny M. Dwivany verfasserin aut Expression Study of Banana Pathogenic Resistance Genes 2016 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Banana is one of the world's most important trade commodities. However, infection of banana pathogenic fungi (Fusarium oxysporum race 4) is one of the major causes of decreasing production in Indonesia. Genetic engineering has become an alternative way to control this problem by isolating genes that involved in plant defense mechanism against pathogens. Two of the important genes are API5 and ChiI1, each gene encodes apoptosis inhibitory protein and chitinase enzymes. The purpose of this study was to study the expression of API5 and ChiI1 genes as candidate pathogenic resistance genes. The amplified fragments were then cloned, sequenced, and confirmed with in silico studies. Based on sequence analysis, it is showed that partial API5 gene has putative transactivation domain and ChiI1 has 9 chitinase family GH19 protein motifs. Data obtained from this study will contribute in banana genetic improvement. apoptosis inhibitor 5 (API5) Arabidopsis thaliana chitinase (ChiI1) Musa acuminata pathogen resistance Biology (General) Rizkita Rahmi Esyanti verfasserin aut Aksarani 'Sa Pratiwi verfasserin aut Herafi Zaskia verfasserin aut In Hayati Journal of Biosciences Bogor Agricultural University, 2010 23(2016), 4, Seite 196-199 (DE-627)665320434 (DE-600)2621600-0 20864094 nnns volume:23 year:2016 number:4 pages:196-199 https://doi.org/10.1016/j.hjb.2016.06.007 kostenfrei https://doaj.org/article/3e475bc8ac3c4332b69461e2dcdda330 kostenfrei http://www.sciencedirect.com/science/article/pii/S1978301917300384 kostenfrei https://doaj.org/toc/1978-3019 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 23 2016 4 196-199
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allfieldsGer	10.1016/j.hjb.2016.06.007 doi (DE-627)DOAJ064106837 (DE-599)DOAJ3e475bc8ac3c4332b69461e2dcdda330 DE-627 ger DE-627 rakwb eng ind QH301-705.5 Fenny M. Dwivany verfasserin aut Expression Study of Banana Pathogenic Resistance Genes 2016 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Banana is one of the world's most important trade commodities. However, infection of banana pathogenic fungi (Fusarium oxysporum race 4) is one of the major causes of decreasing production in Indonesia. Genetic engineering has become an alternative way to control this problem by isolating genes that involved in plant defense mechanism against pathogens. Two of the important genes are API5 and ChiI1, each gene encodes apoptosis inhibitory protein and chitinase enzymes. The purpose of this study was to study the expression of API5 and ChiI1 genes as candidate pathogenic resistance genes. The amplified fragments were then cloned, sequenced, and confirmed with in silico studies. Based on sequence analysis, it is showed that partial API5 gene has putative transactivation domain and ChiI1 has 9 chitinase family GH19 protein motifs. Data obtained from this study will contribute in banana genetic improvement. apoptosis inhibitor 5 (API5) Arabidopsis thaliana chitinase (ChiI1) Musa acuminata pathogen resistance Biology (General) Rizkita Rahmi Esyanti verfasserin aut Aksarani 'Sa Pratiwi verfasserin aut Herafi Zaskia verfasserin aut In Hayati Journal of Biosciences Bogor Agricultural University, 2010 23(2016), 4, Seite 196-199 (DE-627)665320434 (DE-600)2621600-0 20864094 nnns volume:23 year:2016 number:4 pages:196-199 https://doi.org/10.1016/j.hjb.2016.06.007 kostenfrei https://doaj.org/article/3e475bc8ac3c4332b69461e2dcdda330 kostenfrei http://www.sciencedirect.com/science/article/pii/S1978301917300384 kostenfrei https://doaj.org/toc/1978-3019 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 23 2016 4 196-199
allfieldsSound	10.1016/j.hjb.2016.06.007 doi (DE-627)DOAJ064106837 (DE-599)DOAJ3e475bc8ac3c4332b69461e2dcdda330 DE-627 ger DE-627 rakwb eng ind QH301-705.5 Fenny M. Dwivany verfasserin aut Expression Study of Banana Pathogenic Resistance Genes 2016 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Banana is one of the world's most important trade commodities. However, infection of banana pathogenic fungi (Fusarium oxysporum race 4) is one of the major causes of decreasing production in Indonesia. Genetic engineering has become an alternative way to control this problem by isolating genes that involved in plant defense mechanism against pathogens. Two of the important genes are API5 and ChiI1, each gene encodes apoptosis inhibitory protein and chitinase enzymes. The purpose of this study was to study the expression of API5 and ChiI1 genes as candidate pathogenic resistance genes. The amplified fragments were then cloned, sequenced, and confirmed with in silico studies. Based on sequence analysis, it is showed that partial API5 gene has putative transactivation domain and ChiI1 has 9 chitinase family GH19 protein motifs. Data obtained from this study will contribute in banana genetic improvement. apoptosis inhibitor 5 (API5) Arabidopsis thaliana chitinase (ChiI1) Musa acuminata pathogen resistance Biology (General) Rizkita Rahmi Esyanti verfasserin aut Aksarani 'Sa Pratiwi verfasserin aut Herafi Zaskia verfasserin aut In Hayati Journal of Biosciences Bogor Agricultural University, 2010 23(2016), 4, Seite 196-199 (DE-627)665320434 (DE-600)2621600-0 20864094 nnns volume:23 year:2016 number:4 pages:196-199 https://doi.org/10.1016/j.hjb.2016.06.007 kostenfrei https://doaj.org/article/3e475bc8ac3c4332b69461e2dcdda330 kostenfrei http://www.sciencedirect.com/science/article/pii/S1978301917300384 kostenfrei https://doaj.org/toc/1978-3019 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 23 2016 4 196-199
language	English Indonesian
source	In Hayati Journal of Biosciences 23(2016), 4, Seite 196-199 volume:23 year:2016 number:4 pages:196-199
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topic_facet	apoptosis inhibitor 5 (API5) Arabidopsis thaliana chitinase (ChiI1) Musa acuminata pathogen resistance Biology (General)
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container_title	Hayati Journal of Biosciences
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author	Fenny M. Dwivany
spellingShingle	Fenny M. Dwivany misc QH301-705.5 misc apoptosis inhibitor 5 (API5) misc Arabidopsis thaliana misc chitinase (ChiI1) misc Musa acuminata misc pathogen resistance misc Biology (General) Expression Study of Banana Pathogenic Resistance Genes
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topic_title	QH301-705.5 Expression Study of Banana Pathogenic Resistance Genes apoptosis inhibitor 5 (API5) Arabidopsis thaliana chitinase (ChiI1) Musa acuminata pathogen resistance
topic	misc QH301-705.5 misc apoptosis inhibitor 5 (API5) misc Arabidopsis thaliana misc chitinase (ChiI1) misc Musa acuminata misc pathogen resistance misc Biology (General)
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title	Expression Study of Banana Pathogenic Resistance Genes
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title_full	Expression Study of Banana Pathogenic Resistance Genes
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title_sort	expression study of banana pathogenic resistance genes
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title_auth	Expression Study of Banana Pathogenic Resistance Genes
abstract	Banana is one of the world's most important trade commodities. However, infection of banana pathogenic fungi (Fusarium oxysporum race 4) is one of the major causes of decreasing production in Indonesia. Genetic engineering has become an alternative way to control this problem by isolating genes that involved in plant defense mechanism against pathogens. Two of the important genes are API5 and ChiI1, each gene encodes apoptosis inhibitory protein and chitinase enzymes. The purpose of this study was to study the expression of API5 and ChiI1 genes as candidate pathogenic resistance genes. The amplified fragments were then cloned, sequenced, and confirmed with in silico studies. Based on sequence analysis, it is showed that partial API5 gene has putative transactivation domain and ChiI1 has 9 chitinase family GH19 protein motifs. Data obtained from this study will contribute in banana genetic improvement.
abstractGer	Banana is one of the world's most important trade commodities. However, infection of banana pathogenic fungi (Fusarium oxysporum race 4) is one of the major causes of decreasing production in Indonesia. Genetic engineering has become an alternative way to control this problem by isolating genes that involved in plant defense mechanism against pathogens. Two of the important genes are API5 and ChiI1, each gene encodes apoptosis inhibitory protein and chitinase enzymes. The purpose of this study was to study the expression of API5 and ChiI1 genes as candidate pathogenic resistance genes. The amplified fragments were then cloned, sequenced, and confirmed with in silico studies. Based on sequence analysis, it is showed that partial API5 gene has putative transactivation domain and ChiI1 has 9 chitinase family GH19 protein motifs. Data obtained from this study will contribute in banana genetic improvement.
abstract_unstemmed	Banana is one of the world's most important trade commodities. However, infection of banana pathogenic fungi (Fusarium oxysporum race 4) is one of the major causes of decreasing production in Indonesia. Genetic engineering has become an alternative way to control this problem by isolating genes that involved in plant defense mechanism against pathogens. Two of the important genes are API5 and ChiI1, each gene encodes apoptosis inhibitory protein and chitinase enzymes. The purpose of this study was to study the expression of API5 and ChiI1 genes as candidate pathogenic resistance genes. The amplified fragments were then cloned, sequenced, and confirmed with in silico studies. Based on sequence analysis, it is showed that partial API5 gene has putative transactivation domain and ChiI1 has 9 chitinase family GH19 protein motifs. Data obtained from this study will contribute in banana genetic improvement.
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title_short	Expression Study of Banana Pathogenic Resistance Genes
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Expression Study of Banana Pathogenic Resistance Genes

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