Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium

Abstract Paraburkholderia caballeronis is a plant-associated bacterium. Strain TNe-841T was isolated from the rhizosphere of tomato (Solanum lycopersicum L. var. lycopersicum) growing in Nepantla Mexico State. Initially this bacterium was found to effectively nodulate Phaseolus vulgaris L. However,...
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Autor*in:	Fernando Uriel Rojas-Rojas [verfasserIn] Erika Yanet Tapia-García [verfasserIn] Maskit Maymon [verfasserIn] Ethan Humm [verfasserIn] Marcel Huntemann [verfasserIn] Alicia Clum [verfasserIn] Manoj Pillay [verfasserIn] Krishnaveni Palaniappan [verfasserIn] Neha Varghese [verfasserIn] Natalia Mikhailova [verfasserIn] Dimitrios Stamatis [verfasserIn] T. B. K. Reddy [verfasserIn] Victor Markowitz [verfasserIn] Natalia Ivanova [verfasserIn] Nikos Kyrpides [verfasserIn] Tanja Woyke [verfasserIn] Nicole Shapiro [verfasserIn] Ann M. Hirsch [verfasserIn] Paulina Estrada-de los Santos [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2017

Schlagwörter:	Paraburkholderia caballeronis Tomato plant Rhizosphere Nitrogen fixation Root nodulation

Übergeordnetes Werk:	In: Standards in Genomic Sciences - BMC, 2015, 12(2017), 1, Seite 8
Übergeordnetes Werk:	volume:12 ; year:2017 ; number:1 ; pages:8

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.1186/s40793-017-0294-7

Katalog-ID:	DOAJ067634079

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authorswithroles_txt_mv	Fernando Uriel Rojas-Rojas @@aut@@ Erika Yanet Tapia-García @@aut@@ Maskit Maymon @@aut@@ Ethan Humm @@aut@@ Marcel Huntemann @@aut@@ Alicia Clum @@aut@@ Manoj Pillay @@aut@@ Krishnaveni Palaniappan @@aut@@ Neha Varghese @@aut@@ Natalia Mikhailova @@aut@@ Dimitrios Stamatis @@aut@@ T. B. K. Reddy @@aut@@ Victor Markowitz @@aut@@ Natalia Ivanova @@aut@@ Nikos Kyrpides @@aut@@ Tanja Woyke @@aut@@ Nicole Shapiro @@aut@@ Ann M. Hirsch @@aut@@ Paulina Estrada-de los Santos @@aut@@
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callnumber-first	Q - Science
author	Fernando Uriel Rojas-Rojas
spellingShingle	Fernando Uriel Rojas-Rojas misc QH426-470 misc Paraburkholderia caballeronis misc Tomato plant misc Rhizosphere misc Nitrogen fixation misc Root nodulation misc Genetics Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium
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topic_title	QH426-470 Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium Paraburkholderia caballeronis Tomato plant Rhizosphere Nitrogen fixation Root nodulation
topic	misc QH426-470 misc Paraburkholderia caballeronis misc Tomato plant misc Rhizosphere misc Nitrogen fixation misc Root nodulation misc Genetics
topic_unstemmed	misc QH426-470 misc Paraburkholderia caballeronis misc Tomato plant misc Rhizosphere misc Nitrogen fixation misc Root nodulation misc Genetics
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title	Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium
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title_full	Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium
author_sort	Fernando Uriel Rojas-Rojas
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title_sort	draft genome of paraburkholderia caballeronis tne-841t, a free-living, nitrogen-fixing, tomato plant-associated bacterium
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title_auth	Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium
abstract	Abstract Paraburkholderia caballeronis is a plant-associated bacterium. Strain TNe-841T was isolated from the rhizosphere of tomato (Solanum lycopersicum L. var. lycopersicum) growing in Nepantla Mexico State. Initially this bacterium was found to effectively nodulate Phaseolus vulgaris L. However, from an analysis of the genome of strain TNe-841T and from repeat inoculation experiments, we found that this strain did not nodulate bean and also lacked nodulation genes, suggesting that the genes were lost. The genome consists of 7,115,141 bp with a G + C content of 67.01%. The sequence includes 6251 protein-coding genes and 87 RNA genes.
abstractGer	Abstract Paraburkholderia caballeronis is a plant-associated bacterium. Strain TNe-841T was isolated from the rhizosphere of tomato (Solanum lycopersicum L. var. lycopersicum) growing in Nepantla Mexico State. Initially this bacterium was found to effectively nodulate Phaseolus vulgaris L. However, from an analysis of the genome of strain TNe-841T and from repeat inoculation experiments, we found that this strain did not nodulate bean and also lacked nodulation genes, suggesting that the genes were lost. The genome consists of 7,115,141 bp with a G + C content of 67.01%. The sequence includes 6251 protein-coding genes and 87 RNA genes.
abstract_unstemmed	Abstract Paraburkholderia caballeronis is a plant-associated bacterium. Strain TNe-841T was isolated from the rhizosphere of tomato (Solanum lycopersicum L. var. lycopersicum) growing in Nepantla Mexico State. Initially this bacterium was found to effectively nodulate Phaseolus vulgaris L. However, from an analysis of the genome of strain TNe-841T and from repeat inoculation experiments, we found that this strain did not nodulate bean and also lacked nodulation genes, suggesting that the genes were lost. The genome consists of 7,115,141 bp with a G + C content of 67.01%. The sequence includes 6251 protein-coding genes and 87 RNA genes.
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title_short	Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium
url	https://doi.org/10.1186/s40793-017-0294-7 https://doaj.org/article/258cac539b2e4f01af1f4a6c0a405e97 http://link.springer.com/article/10.1186/s40793-017-0294-7 https://doaj.org/toc/1944-3277
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Strain TNe-841T was isolated from the rhizosphere of tomato (Solanum lycopersicum L. var. lycopersicum) growing in Nepantla Mexico State. Initially this bacterium was found to effectively nodulate Phaseolus vulgaris L. However, from an analysis of the genome of strain TNe-841T and from repeat inoculation experiments, we found that this strain did not nodulate bean and also lacked nodulation genes, suggesting that the genes were lost. The genome consists of 7,115,141 bp with a G + C content of 67.01%. 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Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium

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