Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis

Grain development is one of the biological processes, which contributes to the final grain yield. To understand the molecular changes taking place during the early grain development, we profiled proteomes of two common wheat cultivars P271 and Chinese Spring (CS) with large and small grains, respect...
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Gespeichert in:

Autor*in:	Mingming Yang [verfasserIn] Xiang Gao [verfasserIn] Jian Dong [verfasserIn] Nitant Gandhi [verfasserIn] Huanjie Cai [verfasserIn] Diter H. von Wettstein [verfasserIn] Sachin Rustgi [verfasserIn] Shanshan Wen [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2017

Schlagwörter:	wheat grain development metabolic pathway proteome chromosome

Übergeordnetes Werk:	In: Frontiers in Plant Science - Frontiers Media S.A., 2011, 8(2017)
Übergeordnetes Werk:	volume:8 ; year:2017

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3389/fpls.2017.00962

Katalog-ID:	DOAJ068148771

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520			\|a Grain development is one of the biological processes, which contributes to the final grain yield. To understand the molecular changes taking place during the early grain development, we profiled proteomes of two common wheat cultivars P271 and Chinese Spring (CS) with large and small grains, respectively at three grain developmental stages (4, 8, and 12 days post anthesis). An iTRAQ (isobaric tags for relative and absolute quantitation) based proteomics approach was used for this purpose. More than 3,600 proteins were reported to accumulate during early grain development in both wheat cultivars. Of these 3,600 proteins, 130 expressed differentially between two wheat cultivars, and 306 exhibited developmental stage-specific accumulation in either or both genotypes. Detailed bioinformatic analyses of differentially expressed proteins (DEPs) from the large- and small-grain wheat cultivars underscored the developmental differences observed between them and shed light on the molecular and cellular processes contributing to these differences. In silico localization of either or both sets of DEPs to wheat chromosomes exhibited a biased genomic distribution with chromosome 4D contributing largely to it. These results corresponded well with the earlier studies, performed in common wheat, where chromosome 4D was reported to harbor QTLs for yield contributing traits specifically grain length. Collectively, our results provide insight into the molecular processes taking place during early grain development, a knowledge, which may prove useful in improving wheat grain yield in the future.
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author_variant	m y my m y my x g xg x g xg j d jd j d jd n g ng h c hc h c hc d h v w dhvw s r sr s r sr s w sw
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allfields	10.3389/fpls.2017.00962 doi (DE-627)DOAJ068148771 (DE-599)DOAJ807ee7b997ee4f73a548748bae10b162 DE-627 ger DE-627 rakwb eng SB1-1110 Mingming Yang verfasserin aut Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis 2017 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Grain development is one of the biological processes, which contributes to the final grain yield. To understand the molecular changes taking place during the early grain development, we profiled proteomes of two common wheat cultivars P271 and Chinese Spring (CS) with large and small grains, respectively at three grain developmental stages (4, 8, and 12 days post anthesis). An iTRAQ (isobaric tags for relative and absolute quantitation) based proteomics approach was used for this purpose. More than 3,600 proteins were reported to accumulate during early grain development in both wheat cultivars. Of these 3,600 proteins, 130 expressed differentially between two wheat cultivars, and 306 exhibited developmental stage-specific accumulation in either or both genotypes. Detailed bioinformatic analyses of differentially expressed proteins (DEPs) from the large- and small-grain wheat cultivars underscored the developmental differences observed between them and shed light on the molecular and cellular processes contributing to these differences. In silico localization of either or both sets of DEPs to wheat chromosomes exhibited a biased genomic distribution with chromosome 4D contributing largely to it. These results corresponded well with the earlier studies, performed in common wheat, where chromosome 4D was reported to harbor QTLs for yield contributing traits specifically grain length. Collectively, our results provide insight into the molecular processes taking place during early grain development, a knowledge, which may prove useful in improving wheat grain yield in the future. wheat grain development metabolic pathway proteome chromosome Plant culture Mingming Yang verfasserin aut Xiang Gao verfasserin aut Xiang Gao verfasserin aut Jian Dong verfasserin aut Jian Dong verfasserin aut Nitant Gandhi verfasserin aut Huanjie Cai verfasserin aut Huanjie Cai verfasserin aut Diter H. von Wettstein verfasserin aut Sachin Rustgi verfasserin aut Sachin Rustgi verfasserin aut Shanshan Wen verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 8(2017) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:8 year:2017 https://doi.org/10.3389/fpls.2017.00962 kostenfrei https://doaj.org/article/807ee7b997ee4f73a548748bae10b162 kostenfrei http://journal.frontiersin.org/article/10.3389/fpls.2017.00962/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2017
spelling	10.3389/fpls.2017.00962 doi (DE-627)DOAJ068148771 (DE-599)DOAJ807ee7b997ee4f73a548748bae10b162 DE-627 ger DE-627 rakwb eng SB1-1110 Mingming Yang verfasserin aut Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis 2017 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Grain development is one of the biological processes, which contributes to the final grain yield. To understand the molecular changes taking place during the early grain development, we profiled proteomes of two common wheat cultivars P271 and Chinese Spring (CS) with large and small grains, respectively at three grain developmental stages (4, 8, and 12 days post anthesis). An iTRAQ (isobaric tags for relative and absolute quantitation) based proteomics approach was used for this purpose. More than 3,600 proteins were reported to accumulate during early grain development in both wheat cultivars. Of these 3,600 proteins, 130 expressed differentially between two wheat cultivars, and 306 exhibited developmental stage-specific accumulation in either or both genotypes. Detailed bioinformatic analyses of differentially expressed proteins (DEPs) from the large- and small-grain wheat cultivars underscored the developmental differences observed between them and shed light on the molecular and cellular processes contributing to these differences. In silico localization of either or both sets of DEPs to wheat chromosomes exhibited a biased genomic distribution with chromosome 4D contributing largely to it. These results corresponded well with the earlier studies, performed in common wheat, where chromosome 4D was reported to harbor QTLs for yield contributing traits specifically grain length. Collectively, our results provide insight into the molecular processes taking place during early grain development, a knowledge, which may prove useful in improving wheat grain yield in the future. wheat grain development metabolic pathway proteome chromosome Plant culture Mingming Yang verfasserin aut Xiang Gao verfasserin aut Xiang Gao verfasserin aut Jian Dong verfasserin aut Jian Dong verfasserin aut Nitant Gandhi verfasserin aut Huanjie Cai verfasserin aut Huanjie Cai verfasserin aut Diter H. von Wettstein verfasserin aut Sachin Rustgi verfasserin aut Sachin Rustgi verfasserin aut Shanshan Wen verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 8(2017) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:8 year:2017 https://doi.org/10.3389/fpls.2017.00962 kostenfrei https://doaj.org/article/807ee7b997ee4f73a548748bae10b162 kostenfrei http://journal.frontiersin.org/article/10.3389/fpls.2017.00962/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2017
allfields_unstemmed	10.3389/fpls.2017.00962 doi (DE-627)DOAJ068148771 (DE-599)DOAJ807ee7b997ee4f73a548748bae10b162 DE-627 ger DE-627 rakwb eng SB1-1110 Mingming Yang verfasserin aut Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis 2017 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Grain development is one of the biological processes, which contributes to the final grain yield. To understand the molecular changes taking place during the early grain development, we profiled proteomes of two common wheat cultivars P271 and Chinese Spring (CS) with large and small grains, respectively at three grain developmental stages (4, 8, and 12 days post anthesis). An iTRAQ (isobaric tags for relative and absolute quantitation) based proteomics approach was used for this purpose. More than 3,600 proteins were reported to accumulate during early grain development in both wheat cultivars. Of these 3,600 proteins, 130 expressed differentially between two wheat cultivars, and 306 exhibited developmental stage-specific accumulation in either or both genotypes. Detailed bioinformatic analyses of differentially expressed proteins (DEPs) from the large- and small-grain wheat cultivars underscored the developmental differences observed between them and shed light on the molecular and cellular processes contributing to these differences. In silico localization of either or both sets of DEPs to wheat chromosomes exhibited a biased genomic distribution with chromosome 4D contributing largely to it. These results corresponded well with the earlier studies, performed in common wheat, where chromosome 4D was reported to harbor QTLs for yield contributing traits specifically grain length. Collectively, our results provide insight into the molecular processes taking place during early grain development, a knowledge, which may prove useful in improving wheat grain yield in the future. wheat grain development metabolic pathway proteome chromosome Plant culture Mingming Yang verfasserin aut Xiang Gao verfasserin aut Xiang Gao verfasserin aut Jian Dong verfasserin aut Jian Dong verfasserin aut Nitant Gandhi verfasserin aut Huanjie Cai verfasserin aut Huanjie Cai verfasserin aut Diter H. von Wettstein verfasserin aut Sachin Rustgi verfasserin aut Sachin Rustgi verfasserin aut Shanshan Wen verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 8(2017) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:8 year:2017 https://doi.org/10.3389/fpls.2017.00962 kostenfrei https://doaj.org/article/807ee7b997ee4f73a548748bae10b162 kostenfrei http://journal.frontiersin.org/article/10.3389/fpls.2017.00962/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2017
allfieldsGer	10.3389/fpls.2017.00962 doi (DE-627)DOAJ068148771 (DE-599)DOAJ807ee7b997ee4f73a548748bae10b162 DE-627 ger DE-627 rakwb eng SB1-1110 Mingming Yang verfasserin aut Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis 2017 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Grain development is one of the biological processes, which contributes to the final grain yield. To understand the molecular changes taking place during the early grain development, we profiled proteomes of two common wheat cultivars P271 and Chinese Spring (CS) with large and small grains, respectively at three grain developmental stages (4, 8, and 12 days post anthesis). An iTRAQ (isobaric tags for relative and absolute quantitation) based proteomics approach was used for this purpose. More than 3,600 proteins were reported to accumulate during early grain development in both wheat cultivars. Of these 3,600 proteins, 130 expressed differentially between two wheat cultivars, and 306 exhibited developmental stage-specific accumulation in either or both genotypes. Detailed bioinformatic analyses of differentially expressed proteins (DEPs) from the large- and small-grain wheat cultivars underscored the developmental differences observed between them and shed light on the molecular and cellular processes contributing to these differences. In silico localization of either or both sets of DEPs to wheat chromosomes exhibited a biased genomic distribution with chromosome 4D contributing largely to it. These results corresponded well with the earlier studies, performed in common wheat, where chromosome 4D was reported to harbor QTLs for yield contributing traits specifically grain length. Collectively, our results provide insight into the molecular processes taking place during early grain development, a knowledge, which may prove useful in improving wheat grain yield in the future. wheat grain development metabolic pathway proteome chromosome Plant culture Mingming Yang verfasserin aut Xiang Gao verfasserin aut Xiang Gao verfasserin aut Jian Dong verfasserin aut Jian Dong verfasserin aut Nitant Gandhi verfasserin aut Huanjie Cai verfasserin aut Huanjie Cai verfasserin aut Diter H. von Wettstein verfasserin aut Sachin Rustgi verfasserin aut Sachin Rustgi verfasserin aut Shanshan Wen verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 8(2017) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:8 year:2017 https://doi.org/10.3389/fpls.2017.00962 kostenfrei https://doaj.org/article/807ee7b997ee4f73a548748bae10b162 kostenfrei http://journal.frontiersin.org/article/10.3389/fpls.2017.00962/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2017
allfieldsSound	10.3389/fpls.2017.00962 doi (DE-627)DOAJ068148771 (DE-599)DOAJ807ee7b997ee4f73a548748bae10b162 DE-627 ger DE-627 rakwb eng SB1-1110 Mingming Yang verfasserin aut Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis 2017 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Grain development is one of the biological processes, which contributes to the final grain yield. To understand the molecular changes taking place during the early grain development, we profiled proteomes of two common wheat cultivars P271 and Chinese Spring (CS) with large and small grains, respectively at three grain developmental stages (4, 8, and 12 days post anthesis). An iTRAQ (isobaric tags for relative and absolute quantitation) based proteomics approach was used for this purpose. More than 3,600 proteins were reported to accumulate during early grain development in both wheat cultivars. Of these 3,600 proteins, 130 expressed differentially between two wheat cultivars, and 306 exhibited developmental stage-specific accumulation in either or both genotypes. Detailed bioinformatic analyses of differentially expressed proteins (DEPs) from the large- and small-grain wheat cultivars underscored the developmental differences observed between them and shed light on the molecular and cellular processes contributing to these differences. In silico localization of either or both sets of DEPs to wheat chromosomes exhibited a biased genomic distribution with chromosome 4D contributing largely to it. These results corresponded well with the earlier studies, performed in common wheat, where chromosome 4D was reported to harbor QTLs for yield contributing traits specifically grain length. Collectively, our results provide insight into the molecular processes taking place during early grain development, a knowledge, which may prove useful in improving wheat grain yield in the future. wheat grain development metabolic pathway proteome chromosome Plant culture Mingming Yang verfasserin aut Xiang Gao verfasserin aut Xiang Gao verfasserin aut Jian Dong verfasserin aut Jian Dong verfasserin aut Nitant Gandhi verfasserin aut Huanjie Cai verfasserin aut Huanjie Cai verfasserin aut Diter H. von Wettstein verfasserin aut Sachin Rustgi verfasserin aut Sachin Rustgi verfasserin aut Shanshan Wen verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 8(2017) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:8 year:2017 https://doi.org/10.3389/fpls.2017.00962 kostenfrei https://doaj.org/article/807ee7b997ee4f73a548748bae10b162 kostenfrei http://journal.frontiersin.org/article/10.3389/fpls.2017.00962/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 8 2017
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authorswithroles_txt_mv	Mingming Yang @@aut@@ Xiang Gao @@aut@@ Jian Dong @@aut@@ Nitant Gandhi @@aut@@ Huanjie Cai @@aut@@ Diter H. von Wettstein @@aut@@ Sachin Rustgi @@aut@@ Shanshan Wen @@aut@@
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callnumber-first	S - Agriculture
author	Mingming Yang
spellingShingle	Mingming Yang misc SB1-1110 misc wheat misc grain development misc metabolic pathway misc proteome misc chromosome misc Plant culture Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis
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topic_title	SB1-1110 Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis wheat grain development metabolic pathway proteome chromosome
topic	misc SB1-1110 misc wheat misc grain development misc metabolic pathway misc proteome misc chromosome misc Plant culture
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title	Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis
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title_full	Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis
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title_sort	pattern of protein expression in developing wheat grains identified through proteomic analysis
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title_auth	Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis
abstract	Grain development is one of the biological processes, which contributes to the final grain yield. To understand the molecular changes taking place during the early grain development, we profiled proteomes of two common wheat cultivars P271 and Chinese Spring (CS) with large and small grains, respectively at three grain developmental stages (4, 8, and 12 days post anthesis). An iTRAQ (isobaric tags for relative and absolute quantitation) based proteomics approach was used for this purpose. More than 3,600 proteins were reported to accumulate during early grain development in both wheat cultivars. Of these 3,600 proteins, 130 expressed differentially between two wheat cultivars, and 306 exhibited developmental stage-specific accumulation in either or both genotypes. Detailed bioinformatic analyses of differentially expressed proteins (DEPs) from the large- and small-grain wheat cultivars underscored the developmental differences observed between them and shed light on the molecular and cellular processes contributing to these differences. In silico localization of either or both sets of DEPs to wheat chromosomes exhibited a biased genomic distribution with chromosome 4D contributing largely to it. These results corresponded well with the earlier studies, performed in common wheat, where chromosome 4D was reported to harbor QTLs for yield contributing traits specifically grain length. Collectively, our results provide insight into the molecular processes taking place during early grain development, a knowledge, which may prove useful in improving wheat grain yield in the future.
abstractGer	Grain development is one of the biological processes, which contributes to the final grain yield. To understand the molecular changes taking place during the early grain development, we profiled proteomes of two common wheat cultivars P271 and Chinese Spring (CS) with large and small grains, respectively at three grain developmental stages (4, 8, and 12 days post anthesis). An iTRAQ (isobaric tags for relative and absolute quantitation) based proteomics approach was used for this purpose. More than 3,600 proteins were reported to accumulate during early grain development in both wheat cultivars. Of these 3,600 proteins, 130 expressed differentially between two wheat cultivars, and 306 exhibited developmental stage-specific accumulation in either or both genotypes. Detailed bioinformatic analyses of differentially expressed proteins (DEPs) from the large- and small-grain wheat cultivars underscored the developmental differences observed between them and shed light on the molecular and cellular processes contributing to these differences. In silico localization of either or both sets of DEPs to wheat chromosomes exhibited a biased genomic distribution with chromosome 4D contributing largely to it. These results corresponded well with the earlier studies, performed in common wheat, where chromosome 4D was reported to harbor QTLs for yield contributing traits specifically grain length. Collectively, our results provide insight into the molecular processes taking place during early grain development, a knowledge, which may prove useful in improving wheat grain yield in the future.
abstract_unstemmed	Grain development is one of the biological processes, which contributes to the final grain yield. To understand the molecular changes taking place during the early grain development, we profiled proteomes of two common wheat cultivars P271 and Chinese Spring (CS) with large and small grains, respectively at three grain developmental stages (4, 8, and 12 days post anthesis). An iTRAQ (isobaric tags for relative and absolute quantitation) based proteomics approach was used for this purpose. More than 3,600 proteins were reported to accumulate during early grain development in both wheat cultivars. Of these 3,600 proteins, 130 expressed differentially between two wheat cultivars, and 306 exhibited developmental stage-specific accumulation in either or both genotypes. Detailed bioinformatic analyses of differentially expressed proteins (DEPs) from the large- and small-grain wheat cultivars underscored the developmental differences observed between them and shed light on the molecular and cellular processes contributing to these differences. In silico localization of either or both sets of DEPs to wheat chromosomes exhibited a biased genomic distribution with chromosome 4D contributing largely to it. These results corresponded well with the earlier studies, performed in common wheat, where chromosome 4D was reported to harbor QTLs for yield contributing traits specifically grain length. Collectively, our results provide insight into the molecular processes taking place during early grain development, a knowledge, which may prove useful in improving wheat grain yield in the future.
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title_short	Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis
url	https://doi.org/10.3389/fpls.2017.00962 https://doaj.org/article/807ee7b997ee4f73a548748bae10b162 http://journal.frontiersin.org/article/10.3389/fpls.2017.00962/full https://doaj.org/toc/1664-462X
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up_date	2024-07-03T16:09:07.199Z
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Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis

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