Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i<

The Hong Kong oyster <i<Magallana hongkongensis</i<, previously known as <i<Crassostrea hongkongensis</i<, is a true oyster species native to the estuarine-coast of the Pearl River Delta in southern China. The species—with scientific, ecological, cultural, and nutritional imp...
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Autor*in:	Yichun Xie [verfasserIn] Elaine Y. Y. Huang [verfasserIn] Wenyan Nong [verfasserIn] Sean T. S. Law [verfasserIn] Yifei Yu [verfasserIn] Khan Cheung [verfasserIn] Yiqian Li [verfasserIn] Cheuk Fung Wong [verfasserIn] Ho Yin Yip [verfasserIn] Patrick W. S. Joyce [verfasserIn] King Ming Chan [verfasserIn] Ka Hou Chu [verfasserIn] Bayden D. Russell [verfasserIn] Laura J. Falkenberg [verfasserIn] Jerome H. L. Hui [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2022

Schlagwörter:	population structure heat shock responses gut microbiome adaptation

Übergeordnetes Werk:	In: Journal of Marine Science and Engineering - MDPI AG, 2014, 10(2022), 2, p 237
Übergeordnetes Werk:	volume:10 ; year:2022 ; number:2, p 237

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3390/jmse10020237

Katalog-ID:	DOAJ069461171

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allfields	10.3390/jmse10020237 doi (DE-627)DOAJ069461171 (DE-599)DOAJ43bcac6d05994074b7568239605c4f35 DE-627 ger DE-627 rakwb eng VM1-989 GC1-1581 Yichun Xie verfasserin aut Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i< 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The Hong Kong oyster <i<Magallana hongkongensis</i<, previously known as <i<Crassostrea hongkongensis</i<, is a true oyster species native to the estuarine-coast of the Pearl River Delta in southern China. The species—with scientific, ecological, cultural, and nutritional importance—has been farmed for hundreds of years. However, there is only limited information on its genetics, stress adaptation mechanisms, and gut microbiota, restricting the sustainable production and use of oyster resources. Here, we present population structure analysis on <i<M. hongkongensis</i< oysters collected from Deep Bay and Lantau Island in Hong Kong, as well as transcriptome analysis on heat shock responses and the gut microbiota profile of <i<M. hongkongensis</i< oysters collected from Deep Bay. Single nucleotide polymorphisms (SNPs), including those on the homeobox genes and heat shock protein genes, were revealed by the whole genome resequencing. Transcriptomes of oysters incubated at 25 °C and 32 °C for 24 h were sequenced which revealed the heat-induced regulation of heat shock protein pathway genes. Furthermore, the gut microbe community was detected by 16S rRNA sequencing which identified Cyanobacteria, Proteobacteria and Spirochaetes as the most abundant phyla. This study reveals the molecular basis for the adaptation of the oyster <i<M. hongkongensis</i< to environmental conditions. <i<Magallana hongkongensis</i< population structure heat shock responses gut microbiome adaptation Naval architecture. Shipbuilding. Marine engineering Oceanography Elaine Y. Y. Huang verfasserin aut Wenyan Nong verfasserin aut Sean T. S. Law verfasserin aut Yifei Yu verfasserin aut Khan Cheung verfasserin aut Yiqian Li verfasserin aut Cheuk Fung Wong verfasserin aut Ho Yin Yip verfasserin aut Patrick W. S. Joyce verfasserin aut King Ming Chan verfasserin aut Ka Hou Chu verfasserin aut Bayden D. Russell verfasserin aut Laura J. Falkenberg verfasserin aut Jerome H. L. Hui verfasserin aut In Journal of Marine Science and Engineering MDPI AG, 2014 10(2022), 2, p 237 (DE-627)771274181 (DE-600)2738390-8 20771312 nnns volume:10 year:2022 number:2, p 237 https://doi.org/10.3390/jmse10020237 kostenfrei https://doaj.org/article/43bcac6d05994074b7568239605c4f35 kostenfrei https://www.mdpi.com/2077-1312/10/2/237 kostenfrei https://doaj.org/toc/2077-1312 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2022 2, p 237
spelling	10.3390/jmse10020237 doi (DE-627)DOAJ069461171 (DE-599)DOAJ43bcac6d05994074b7568239605c4f35 DE-627 ger DE-627 rakwb eng VM1-989 GC1-1581 Yichun Xie verfasserin aut Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i< 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The Hong Kong oyster <i<Magallana hongkongensis</i<, previously known as <i<Crassostrea hongkongensis</i<, is a true oyster species native to the estuarine-coast of the Pearl River Delta in southern China. The species—with scientific, ecological, cultural, and nutritional importance—has been farmed for hundreds of years. However, there is only limited information on its genetics, stress adaptation mechanisms, and gut microbiota, restricting the sustainable production and use of oyster resources. Here, we present population structure analysis on <i<M. hongkongensis</i< oysters collected from Deep Bay and Lantau Island in Hong Kong, as well as transcriptome analysis on heat shock responses and the gut microbiota profile of <i<M. hongkongensis</i< oysters collected from Deep Bay. Single nucleotide polymorphisms (SNPs), including those on the homeobox genes and heat shock protein genes, were revealed by the whole genome resequencing. Transcriptomes of oysters incubated at 25 °C and 32 °C for 24 h were sequenced which revealed the heat-induced regulation of heat shock protein pathway genes. Furthermore, the gut microbe community was detected by 16S rRNA sequencing which identified Cyanobacteria, Proteobacteria and Spirochaetes as the most abundant phyla. This study reveals the molecular basis for the adaptation of the oyster <i<M. hongkongensis</i< to environmental conditions. <i<Magallana hongkongensis</i< population structure heat shock responses gut microbiome adaptation Naval architecture. Shipbuilding. Marine engineering Oceanography Elaine Y. Y. Huang verfasserin aut Wenyan Nong verfasserin aut Sean T. S. Law verfasserin aut Yifei Yu verfasserin aut Khan Cheung verfasserin aut Yiqian Li verfasserin aut Cheuk Fung Wong verfasserin aut Ho Yin Yip verfasserin aut Patrick W. S. Joyce verfasserin aut King Ming Chan verfasserin aut Ka Hou Chu verfasserin aut Bayden D. Russell verfasserin aut Laura J. Falkenberg verfasserin aut Jerome H. L. Hui verfasserin aut In Journal of Marine Science and Engineering MDPI AG, 2014 10(2022), 2, p 237 (DE-627)771274181 (DE-600)2738390-8 20771312 nnns volume:10 year:2022 number:2, p 237 https://doi.org/10.3390/jmse10020237 kostenfrei https://doaj.org/article/43bcac6d05994074b7568239605c4f35 kostenfrei https://www.mdpi.com/2077-1312/10/2/237 kostenfrei https://doaj.org/toc/2077-1312 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2022 2, p 237
allfields_unstemmed	10.3390/jmse10020237 doi (DE-627)DOAJ069461171 (DE-599)DOAJ43bcac6d05994074b7568239605c4f35 DE-627 ger DE-627 rakwb eng VM1-989 GC1-1581 Yichun Xie verfasserin aut Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i< 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The Hong Kong oyster <i<Magallana hongkongensis</i<, previously known as <i<Crassostrea hongkongensis</i<, is a true oyster species native to the estuarine-coast of the Pearl River Delta in southern China. The species—with scientific, ecological, cultural, and nutritional importance—has been farmed for hundreds of years. However, there is only limited information on its genetics, stress adaptation mechanisms, and gut microbiota, restricting the sustainable production and use of oyster resources. Here, we present population structure analysis on <i<M. hongkongensis</i< oysters collected from Deep Bay and Lantau Island in Hong Kong, as well as transcriptome analysis on heat shock responses and the gut microbiota profile of <i<M. hongkongensis</i< oysters collected from Deep Bay. Single nucleotide polymorphisms (SNPs), including those on the homeobox genes and heat shock protein genes, were revealed by the whole genome resequencing. Transcriptomes of oysters incubated at 25 °C and 32 °C for 24 h were sequenced which revealed the heat-induced regulation of heat shock protein pathway genes. Furthermore, the gut microbe community was detected by 16S rRNA sequencing which identified Cyanobacteria, Proteobacteria and Spirochaetes as the most abundant phyla. This study reveals the molecular basis for the adaptation of the oyster <i<M. hongkongensis</i< to environmental conditions. <i<Magallana hongkongensis</i< population structure heat shock responses gut microbiome adaptation Naval architecture. Shipbuilding. Marine engineering Oceanography Elaine Y. Y. Huang verfasserin aut Wenyan Nong verfasserin aut Sean T. S. Law verfasserin aut Yifei Yu verfasserin aut Khan Cheung verfasserin aut Yiqian Li verfasserin aut Cheuk Fung Wong verfasserin aut Ho Yin Yip verfasserin aut Patrick W. S. Joyce verfasserin aut King Ming Chan verfasserin aut Ka Hou Chu verfasserin aut Bayden D. Russell verfasserin aut Laura J. Falkenberg verfasserin aut Jerome H. L. Hui verfasserin aut In Journal of Marine Science and Engineering MDPI AG, 2014 10(2022), 2, p 237 (DE-627)771274181 (DE-600)2738390-8 20771312 nnns volume:10 year:2022 number:2, p 237 https://doi.org/10.3390/jmse10020237 kostenfrei https://doaj.org/article/43bcac6d05994074b7568239605c4f35 kostenfrei https://www.mdpi.com/2077-1312/10/2/237 kostenfrei https://doaj.org/toc/2077-1312 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2022 2, p 237
allfieldsGer	10.3390/jmse10020237 doi (DE-627)DOAJ069461171 (DE-599)DOAJ43bcac6d05994074b7568239605c4f35 DE-627 ger DE-627 rakwb eng VM1-989 GC1-1581 Yichun Xie verfasserin aut Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i< 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The Hong Kong oyster <i<Magallana hongkongensis</i<, previously known as <i<Crassostrea hongkongensis</i<, is a true oyster species native to the estuarine-coast of the Pearl River Delta in southern China. The species—with scientific, ecological, cultural, and nutritional importance—has been farmed for hundreds of years. However, there is only limited information on its genetics, stress adaptation mechanisms, and gut microbiota, restricting the sustainable production and use of oyster resources. Here, we present population structure analysis on <i<M. hongkongensis</i< oysters collected from Deep Bay and Lantau Island in Hong Kong, as well as transcriptome analysis on heat shock responses and the gut microbiota profile of <i<M. hongkongensis</i< oysters collected from Deep Bay. Single nucleotide polymorphisms (SNPs), including those on the homeobox genes and heat shock protein genes, were revealed by the whole genome resequencing. Transcriptomes of oysters incubated at 25 °C and 32 °C for 24 h were sequenced which revealed the heat-induced regulation of heat shock protein pathway genes. Furthermore, the gut microbe community was detected by 16S rRNA sequencing which identified Cyanobacteria, Proteobacteria and Spirochaetes as the most abundant phyla. This study reveals the molecular basis for the adaptation of the oyster <i<M. hongkongensis</i< to environmental conditions. <i<Magallana hongkongensis</i< population structure heat shock responses gut microbiome adaptation Naval architecture. Shipbuilding. Marine engineering Oceanography Elaine Y. Y. Huang verfasserin aut Wenyan Nong verfasserin aut Sean T. S. Law verfasserin aut Yifei Yu verfasserin aut Khan Cheung verfasserin aut Yiqian Li verfasserin aut Cheuk Fung Wong verfasserin aut Ho Yin Yip verfasserin aut Patrick W. S. Joyce verfasserin aut King Ming Chan verfasserin aut Ka Hou Chu verfasserin aut Bayden D. Russell verfasserin aut Laura J. Falkenberg verfasserin aut Jerome H. L. Hui verfasserin aut In Journal of Marine Science and Engineering MDPI AG, 2014 10(2022), 2, p 237 (DE-627)771274181 (DE-600)2738390-8 20771312 nnns volume:10 year:2022 number:2, p 237 https://doi.org/10.3390/jmse10020237 kostenfrei https://doaj.org/article/43bcac6d05994074b7568239605c4f35 kostenfrei https://www.mdpi.com/2077-1312/10/2/237 kostenfrei https://doaj.org/toc/2077-1312 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2022 2, p 237
allfieldsSound	10.3390/jmse10020237 doi (DE-627)DOAJ069461171 (DE-599)DOAJ43bcac6d05994074b7568239605c4f35 DE-627 ger DE-627 rakwb eng VM1-989 GC1-1581 Yichun Xie verfasserin aut Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i< 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The Hong Kong oyster <i<Magallana hongkongensis</i<, previously known as <i<Crassostrea hongkongensis</i<, is a true oyster species native to the estuarine-coast of the Pearl River Delta in southern China. The species—with scientific, ecological, cultural, and nutritional importance—has been farmed for hundreds of years. However, there is only limited information on its genetics, stress adaptation mechanisms, and gut microbiota, restricting the sustainable production and use of oyster resources. Here, we present population structure analysis on <i<M. hongkongensis</i< oysters collected from Deep Bay and Lantau Island in Hong Kong, as well as transcriptome analysis on heat shock responses and the gut microbiota profile of <i<M. hongkongensis</i< oysters collected from Deep Bay. Single nucleotide polymorphisms (SNPs), including those on the homeobox genes and heat shock protein genes, were revealed by the whole genome resequencing. Transcriptomes of oysters incubated at 25 °C and 32 °C for 24 h were sequenced which revealed the heat-induced regulation of heat shock protein pathway genes. Furthermore, the gut microbe community was detected by 16S rRNA sequencing which identified Cyanobacteria, Proteobacteria and Spirochaetes as the most abundant phyla. This study reveals the molecular basis for the adaptation of the oyster <i<M. hongkongensis</i< to environmental conditions. <i<Magallana hongkongensis</i< population structure heat shock responses gut microbiome adaptation Naval architecture. Shipbuilding. Marine engineering Oceanography Elaine Y. Y. Huang verfasserin aut Wenyan Nong verfasserin aut Sean T. S. Law verfasserin aut Yifei Yu verfasserin aut Khan Cheung verfasserin aut Yiqian Li verfasserin aut Cheuk Fung Wong verfasserin aut Ho Yin Yip verfasserin aut Patrick W. S. Joyce verfasserin aut King Ming Chan verfasserin aut Ka Hou Chu verfasserin aut Bayden D. Russell verfasserin aut Laura J. Falkenberg verfasserin aut Jerome H. L. Hui verfasserin aut In Journal of Marine Science and Engineering MDPI AG, 2014 10(2022), 2, p 237 (DE-627)771274181 (DE-600)2738390-8 20771312 nnns volume:10 year:2022 number:2, p 237 https://doi.org/10.3390/jmse10020237 kostenfrei https://doaj.org/article/43bcac6d05994074b7568239605c4f35 kostenfrei https://www.mdpi.com/2077-1312/10/2/237 kostenfrei https://doaj.org/toc/2077-1312 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2022 2, p 237
language	English
source	In Journal of Marine Science and Engineering 10(2022), 2, p 237 volume:10 year:2022 number:2, p 237
sourceStr	In Journal of Marine Science and Engineering 10(2022), 2, p 237 volume:10 year:2022 number:2, p 237
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	<i<Magallana hongkongensis</i< population structure heat shock responses gut microbiome adaptation Naval architecture. Shipbuilding. Marine engineering Oceanography
isfreeaccess_bool	true
container_title	Journal of Marine Science and Engineering
authorswithroles_txt_mv	Yichun Xie @@aut@@ Elaine Y. Y. Huang @@aut@@ Wenyan Nong @@aut@@ Sean T. S. Law @@aut@@ Yifei Yu @@aut@@ Khan Cheung @@aut@@ Yiqian Li @@aut@@ Cheuk Fung Wong @@aut@@ Ho Yin Yip @@aut@@ Patrick W. S. Joyce @@aut@@ King Ming Chan @@aut@@ Ka Hou Chu @@aut@@ Bayden D. Russell @@aut@@ Laura J. Falkenberg @@aut@@ Jerome H. L. Hui @@aut@@
publishDateDaySort_date	2022-01-01T00:00:00Z
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callnumber-first	V - Naval Science
author	Yichun Xie
spellingShingle	Yichun Xie misc VM1-989 misc GC1-1581 misc <i<Magallana hongkongensis</i< misc population structure misc heat shock responses misc gut microbiome misc adaptation misc Naval architecture. Shipbuilding. Marine engineering misc Oceanography Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i<
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topic_title	VM1-989 GC1-1581 Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i< <i<Magallana hongkongensis</i< population structure heat shock responses gut microbiome adaptation
topic	misc VM1-989 misc GC1-1581 misc <i<Magallana hongkongensis</i< misc population structure misc heat shock responses misc gut microbiome misc adaptation misc Naval architecture. Shipbuilding. Marine engineering misc Oceanography
topic_unstemmed	misc VM1-989 misc GC1-1581 misc <i<Magallana hongkongensis</i< misc population structure misc heat shock responses misc gut microbiome misc adaptation misc Naval architecture. Shipbuilding. Marine engineering misc Oceanography
topic_browse	misc VM1-989 misc GC1-1581 misc <i<Magallana hongkongensis</i< misc population structure misc heat shock responses misc gut microbiome misc adaptation misc Naval architecture. Shipbuilding. Marine engineering misc Oceanography
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title	Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i<
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title_full	Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i<
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author_browse	Yichun Xie Elaine Y. Y. Huang Wenyan Nong Sean T. S. Law Yifei Yu Khan Cheung Yiqian Li Cheuk Fung Wong Ho Yin Yip Patrick W. S. Joyce King Ming Chan Ka Hou Chu Bayden D. Russell Laura J. Falkenberg Jerome H. L. Hui
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class	VM1-989 GC1-1581
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author-letter	Yichun Xie
doi_str_mv	10.3390/jmse10020237
author2-role	verfasserin
title_sort	population genomics, transcriptional response to heat shock, and gut microbiota of the hong kong oyster <i<magallana hongkongensis</i<
callnumber	VM1-989
title_auth	Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i<
abstract	The Hong Kong oyster <i<Magallana hongkongensis</i<, previously known as <i<Crassostrea hongkongensis</i<, is a true oyster species native to the estuarine-coast of the Pearl River Delta in southern China. The species—with scientific, ecological, cultural, and nutritional importance—has been farmed for hundreds of years. However, there is only limited information on its genetics, stress adaptation mechanisms, and gut microbiota, restricting the sustainable production and use of oyster resources. Here, we present population structure analysis on <i<M. hongkongensis</i< oysters collected from Deep Bay and Lantau Island in Hong Kong, as well as transcriptome analysis on heat shock responses and the gut microbiota profile of <i<M. hongkongensis</i< oysters collected from Deep Bay. Single nucleotide polymorphisms (SNPs), including those on the homeobox genes and heat shock protein genes, were revealed by the whole genome resequencing. Transcriptomes of oysters incubated at 25 °C and 32 °C for 24 h were sequenced which revealed the heat-induced regulation of heat shock protein pathway genes. Furthermore, the gut microbe community was detected by 16S rRNA sequencing which identified Cyanobacteria, Proteobacteria and Spirochaetes as the most abundant phyla. This study reveals the molecular basis for the adaptation of the oyster <i<M. hongkongensis</i< to environmental conditions.
abstractGer	The Hong Kong oyster <i<Magallana hongkongensis</i<, previously known as <i<Crassostrea hongkongensis</i<, is a true oyster species native to the estuarine-coast of the Pearl River Delta in southern China. The species—with scientific, ecological, cultural, and nutritional importance—has been farmed for hundreds of years. However, there is only limited information on its genetics, stress adaptation mechanisms, and gut microbiota, restricting the sustainable production and use of oyster resources. Here, we present population structure analysis on <i<M. hongkongensis</i< oysters collected from Deep Bay and Lantau Island in Hong Kong, as well as transcriptome analysis on heat shock responses and the gut microbiota profile of <i<M. hongkongensis</i< oysters collected from Deep Bay. Single nucleotide polymorphisms (SNPs), including those on the homeobox genes and heat shock protein genes, were revealed by the whole genome resequencing. Transcriptomes of oysters incubated at 25 °C and 32 °C for 24 h were sequenced which revealed the heat-induced regulation of heat shock protein pathway genes. Furthermore, the gut microbe community was detected by 16S rRNA sequencing which identified Cyanobacteria, Proteobacteria and Spirochaetes as the most abundant phyla. This study reveals the molecular basis for the adaptation of the oyster <i<M. hongkongensis</i< to environmental conditions.
abstract_unstemmed	The Hong Kong oyster <i<Magallana hongkongensis</i<, previously known as <i<Crassostrea hongkongensis</i<, is a true oyster species native to the estuarine-coast of the Pearl River Delta in southern China. The species—with scientific, ecological, cultural, and nutritional importance—has been farmed for hundreds of years. However, there is only limited information on its genetics, stress adaptation mechanisms, and gut microbiota, restricting the sustainable production and use of oyster resources. Here, we present population structure analysis on <i<M. hongkongensis</i< oysters collected from Deep Bay and Lantau Island in Hong Kong, as well as transcriptome analysis on heat shock responses and the gut microbiota profile of <i<M. hongkongensis</i< oysters collected from Deep Bay. Single nucleotide polymorphisms (SNPs), including those on the homeobox genes and heat shock protein genes, were revealed by the whole genome resequencing. Transcriptomes of oysters incubated at 25 °C and 32 °C for 24 h were sequenced which revealed the heat-induced regulation of heat shock protein pathway genes. Furthermore, the gut microbe community was detected by 16S rRNA sequencing which identified Cyanobacteria, Proteobacteria and Spirochaetes as the most abundant phyla. This study reveals the molecular basis for the adaptation of the oyster <i<M. hongkongensis</i< to environmental conditions.
collection_details	GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4335 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700
container_issue	2, p 237
title_short	Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i<
url	https://doi.org/10.3390/jmse10020237 https://doaj.org/article/43bcac6d05994074b7568239605c4f35 https://www.mdpi.com/2077-1312/10/2/237 https://doaj.org/toc/2077-1312
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author2Str	Elaine Y. Y. Huang Wenyan Nong Sean T. S. Law Yifei Yu Khan Cheung Yiqian Li Cheuk Fung Wong Ho Yin Yip Patrick W. S. Joyce King Ming Chan Ka Hou Chu Bayden D. Russell Laura J. Falkenberg Jerome H. L. Hui
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up_date	2024-07-03T23:21:55.606Z
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Population Genomics, Transcriptional Response to Heat Shock, and Gut Microbiota of the Hong Kong Oyster <i<Magallana hongkongensis</i<

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