Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L.

The family of B-box (BBX) transcription factors contains one or two B-BOX domains and sometimes also features a highly conserved CCT domain, which plays important roles in plant growth, development and stress response. Nevertheless, no systematic study of the <i<BBX</i< gene family in &l...
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Autor*in:	Yinjie Wang [verfasserIn] Yongxia Zhang [verfasserIn] Qingquan Liu [verfasserIn] Ting Zhang [verfasserIn] Xinran Chong [verfasserIn] Haiyan Yuan [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2021

Schlagwörter:	stress response phytohormone expression profiling

Übergeordnetes Werk:	In: International Journal of Molecular Sciences - MDPI AG, 2003, 22(2021), 16, p 8793
Übergeordnetes Werk:	volume:22 ; year:2021 ; number:16, p 8793

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc Journal toc

DOI / URN:	10.3390/ijms22168793

Katalog-ID:	DOAJ071074465

Internformat


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520			\|a The family of B-box (BBX) transcription factors contains one or two B-BOX domains and sometimes also features a highly conserved CCT domain, which plays important roles in plant growth, development and stress response. Nevertheless, no systematic study of the <i<BBX</i< gene family in <i<Iris germanica</i< L. has been undertaken. In this study, a set of six <i<BBX</i< TF family genes from <i<I. germanica</i< was identified based on transcriptomic sequences, and clustered into three clades according to phylogenetic analysis. A transient expression analysis revealed that all six BBX proteins were localized in the nucleus. A yeast one-hybrid assay demonstrated that <i<IgBBX3</i< has transactivational activity, while <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX4</i<, and <i<IgBBX5</i< have no transcriptional activation ability. The transcript abundance of <i<IgBBXs</i< in different tissues was divided into two major groups. The expression of <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX3</i< and <i<IgBBX5</i< was higher in leaves, whereas <i<IgBBX4</i< and <i<IgBBX6</i< was higher in roots. The stress response patterns of six <i<IgBBX</i< were detected under phytohormone treatments and abiotic stresses. The results of this study lay the basis for further research on the functions of BBX gene family members in plant hormone and stress responses, which will promote their application in <i<I. germanica</i< breeding.
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allfields	10.3390/ijms22168793 doi (DE-627)DOAJ071074465 (DE-599)DOAJba493b084c9c40b9a98fe786b2272eba DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Yinjie Wang verfasserin aut Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L. 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The family of B-box (BBX) transcription factors contains one or two B-BOX domains and sometimes also features a highly conserved CCT domain, which plays important roles in plant growth, development and stress response. Nevertheless, no systematic study of the <i<BBX</i< gene family in <i<Iris germanica</i< L. has been undertaken. In this study, a set of six <i<BBX</i< TF family genes from <i<I. germanica</i< was identified based on transcriptomic sequences, and clustered into three clades according to phylogenetic analysis. A transient expression analysis revealed that all six BBX proteins were localized in the nucleus. A yeast one-hybrid assay demonstrated that <i<IgBBX3</i< has transactivational activity, while <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX4</i<, and <i<IgBBX5</i< have no transcriptional activation ability. The transcript abundance of <i<IgBBXs</i< in different tissues was divided into two major groups. The expression of <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX3</i< and <i<IgBBX5</i< was higher in leaves, whereas <i<IgBBX4</i< and <i<IgBBX6</i< was higher in roots. The stress response patterns of six <i<IgBBX</i< were detected under phytohormone treatments and abiotic stresses. The results of this study lay the basis for further research on the functions of BBX gene family members in plant hormone and stress responses, which will promote their application in <i<I. germanica</i< breeding. <i<Iris germanica</i< L. <i<BBX</i< transcription factors stress response phytohormone expression profiling Biology (General) Chemistry Yongxia Zhang verfasserin aut Qingquan Liu verfasserin aut Ting Zhang verfasserin aut Xinran Chong verfasserin aut Haiyan Yuan verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 22(2021), 16, p 8793 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:22 year:2021 number:16, p 8793 https://doi.org/10.3390/ijms22168793 kostenfrei https://doaj.org/article/ba493b084c9c40b9a98fe786b2272eba kostenfrei https://www.mdpi.com/1422-0067/22/16/8793 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 22 2021 16, p 8793
spelling	10.3390/ijms22168793 doi (DE-627)DOAJ071074465 (DE-599)DOAJba493b084c9c40b9a98fe786b2272eba DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Yinjie Wang verfasserin aut Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L. 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The family of B-box (BBX) transcription factors contains one or two B-BOX domains and sometimes also features a highly conserved CCT domain, which plays important roles in plant growth, development and stress response. Nevertheless, no systematic study of the <i<BBX</i< gene family in <i<Iris germanica</i< L. has been undertaken. In this study, a set of six <i<BBX</i< TF family genes from <i<I. germanica</i< was identified based on transcriptomic sequences, and clustered into three clades according to phylogenetic analysis. A transient expression analysis revealed that all six BBX proteins were localized in the nucleus. A yeast one-hybrid assay demonstrated that <i<IgBBX3</i< has transactivational activity, while <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX4</i<, and <i<IgBBX5</i< have no transcriptional activation ability. The transcript abundance of <i<IgBBXs</i< in different tissues was divided into two major groups. The expression of <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX3</i< and <i<IgBBX5</i< was higher in leaves, whereas <i<IgBBX4</i< and <i<IgBBX6</i< was higher in roots. The stress response patterns of six <i<IgBBX</i< were detected under phytohormone treatments and abiotic stresses. The results of this study lay the basis for further research on the functions of BBX gene family members in plant hormone and stress responses, which will promote their application in <i<I. germanica</i< breeding. <i<Iris germanica</i< L. <i<BBX</i< transcription factors stress response phytohormone expression profiling Biology (General) Chemistry Yongxia Zhang verfasserin aut Qingquan Liu verfasserin aut Ting Zhang verfasserin aut Xinran Chong verfasserin aut Haiyan Yuan verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 22(2021), 16, p 8793 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:22 year:2021 number:16, p 8793 https://doi.org/10.3390/ijms22168793 kostenfrei https://doaj.org/article/ba493b084c9c40b9a98fe786b2272eba kostenfrei https://www.mdpi.com/1422-0067/22/16/8793 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 22 2021 16, p 8793
allfields_unstemmed	10.3390/ijms22168793 doi (DE-627)DOAJ071074465 (DE-599)DOAJba493b084c9c40b9a98fe786b2272eba DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Yinjie Wang verfasserin aut Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L. 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The family of B-box (BBX) transcription factors contains one or two B-BOX domains and sometimes also features a highly conserved CCT domain, which plays important roles in plant growth, development and stress response. Nevertheless, no systematic study of the <i<BBX</i< gene family in <i<Iris germanica</i< L. has been undertaken. In this study, a set of six <i<BBX</i< TF family genes from <i<I. germanica</i< was identified based on transcriptomic sequences, and clustered into three clades according to phylogenetic analysis. A transient expression analysis revealed that all six BBX proteins were localized in the nucleus. A yeast one-hybrid assay demonstrated that <i<IgBBX3</i< has transactivational activity, while <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX4</i<, and <i<IgBBX5</i< have no transcriptional activation ability. The transcript abundance of <i<IgBBXs</i< in different tissues was divided into two major groups. The expression of <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX3</i< and <i<IgBBX5</i< was higher in leaves, whereas <i<IgBBX4</i< and <i<IgBBX6</i< was higher in roots. The stress response patterns of six <i<IgBBX</i< were detected under phytohormone treatments and abiotic stresses. The results of this study lay the basis for further research on the functions of BBX gene family members in plant hormone and stress responses, which will promote their application in <i<I. germanica</i< breeding. <i<Iris germanica</i< L. <i<BBX</i< transcription factors stress response phytohormone expression profiling Biology (General) Chemistry Yongxia Zhang verfasserin aut Qingquan Liu verfasserin aut Ting Zhang verfasserin aut Xinran Chong verfasserin aut Haiyan Yuan verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 22(2021), 16, p 8793 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:22 year:2021 number:16, p 8793 https://doi.org/10.3390/ijms22168793 kostenfrei https://doaj.org/article/ba493b084c9c40b9a98fe786b2272eba kostenfrei https://www.mdpi.com/1422-0067/22/16/8793 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 22 2021 16, p 8793
allfieldsGer	10.3390/ijms22168793 doi (DE-627)DOAJ071074465 (DE-599)DOAJba493b084c9c40b9a98fe786b2272eba DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Yinjie Wang verfasserin aut Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L. 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The family of B-box (BBX) transcription factors contains one or two B-BOX domains and sometimes also features a highly conserved CCT domain, which plays important roles in plant growth, development and stress response. Nevertheless, no systematic study of the <i<BBX</i< gene family in <i<Iris germanica</i< L. has been undertaken. In this study, a set of six <i<BBX</i< TF family genes from <i<I. germanica</i< was identified based on transcriptomic sequences, and clustered into three clades according to phylogenetic analysis. A transient expression analysis revealed that all six BBX proteins were localized in the nucleus. A yeast one-hybrid assay demonstrated that <i<IgBBX3</i< has transactivational activity, while <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX4</i<, and <i<IgBBX5</i< have no transcriptional activation ability. The transcript abundance of <i<IgBBXs</i< in different tissues was divided into two major groups. The expression of <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX3</i< and <i<IgBBX5</i< was higher in leaves, whereas <i<IgBBX4</i< and <i<IgBBX6</i< was higher in roots. The stress response patterns of six <i<IgBBX</i< were detected under phytohormone treatments and abiotic stresses. The results of this study lay the basis for further research on the functions of BBX gene family members in plant hormone and stress responses, which will promote their application in <i<I. germanica</i< breeding. <i<Iris germanica</i< L. <i<BBX</i< transcription factors stress response phytohormone expression profiling Biology (General) Chemistry Yongxia Zhang verfasserin aut Qingquan Liu verfasserin aut Ting Zhang verfasserin aut Xinran Chong verfasserin aut Haiyan Yuan verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 22(2021), 16, p 8793 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:22 year:2021 number:16, p 8793 https://doi.org/10.3390/ijms22168793 kostenfrei https://doaj.org/article/ba493b084c9c40b9a98fe786b2272eba kostenfrei https://www.mdpi.com/1422-0067/22/16/8793 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 22 2021 16, p 8793
allfieldsSound	10.3390/ijms22168793 doi (DE-627)DOAJ071074465 (DE-599)DOAJba493b084c9c40b9a98fe786b2272eba DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Yinjie Wang verfasserin aut Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L. 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The family of B-box (BBX) transcription factors contains one or two B-BOX domains and sometimes also features a highly conserved CCT domain, which plays important roles in plant growth, development and stress response. Nevertheless, no systematic study of the <i<BBX</i< gene family in <i<Iris germanica</i< L. has been undertaken. In this study, a set of six <i<BBX</i< TF family genes from <i<I. germanica</i< was identified based on transcriptomic sequences, and clustered into three clades according to phylogenetic analysis. A transient expression analysis revealed that all six BBX proteins were localized in the nucleus. A yeast one-hybrid assay demonstrated that <i<IgBBX3</i< has transactivational activity, while <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX4</i<, and <i<IgBBX5</i< have no transcriptional activation ability. The transcript abundance of <i<IgBBXs</i< in different tissues was divided into two major groups. The expression of <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX3</i< and <i<IgBBX5</i< was higher in leaves, whereas <i<IgBBX4</i< and <i<IgBBX6</i< was higher in roots. The stress response patterns of six <i<IgBBX</i< were detected under phytohormone treatments and abiotic stresses. The results of this study lay the basis for further research on the functions of BBX gene family members in plant hormone and stress responses, which will promote their application in <i<I. germanica</i< breeding. <i<Iris germanica</i< L. <i<BBX</i< transcription factors stress response phytohormone expression profiling Biology (General) Chemistry Yongxia Zhang verfasserin aut Qingquan Liu verfasserin aut Ting Zhang verfasserin aut Xinran Chong verfasserin aut Haiyan Yuan verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 22(2021), 16, p 8793 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:22 year:2021 number:16, p 8793 https://doi.org/10.3390/ijms22168793 kostenfrei https://doaj.org/article/ba493b084c9c40b9a98fe786b2272eba kostenfrei https://www.mdpi.com/1422-0067/22/16/8793 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 22 2021 16, p 8793
language	English
source	In International Journal of Molecular Sciences 22(2021), 16, p 8793 volume:22 year:2021 number:16, p 8793
sourceStr	In International Journal of Molecular Sciences 22(2021), 16, p 8793 volume:22 year:2021 number:16, p 8793
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	<i<Iris germanica</i< L. <i<BBX</i< transcription factors stress response phytohormone expression profiling Biology (General) Chemistry
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container_title	International Journal of Molecular Sciences
authorswithroles_txt_mv	Yinjie Wang @@aut@@ Yongxia Zhang @@aut@@ Qingquan Liu @@aut@@ Ting Zhang @@aut@@ Xinran Chong @@aut@@ Haiyan Yuan @@aut@@
publishDateDaySort_date	2021-01-01T00:00:00Z
hierarchy_top_id	316340715
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language_de	englisch
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callnumber-first	Q - Science
author	Yinjie Wang
spellingShingle	Yinjie Wang misc QH301-705.5 misc QD1-999 misc <i<Iris germanica</i< L. misc <i<BBX</i< transcription factors misc stress response misc phytohormone misc expression profiling misc Biology (General) misc Chemistry Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L.
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topic_title	QH301-705.5 QD1-999 Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L. <i<Iris germanica</i< L. <i<BBX</i< transcription factors stress response phytohormone expression profiling
topic	misc QH301-705.5 misc QD1-999 misc <i<Iris germanica</i< L. misc <i<BBX</i< transcription factors misc stress response misc phytohormone misc expression profiling misc Biology (General) misc Chemistry
topic_unstemmed	misc QH301-705.5 misc QD1-999 misc <i<Iris germanica</i< L. misc <i<BBX</i< transcription factors misc stress response misc phytohormone misc expression profiling misc Biology (General) misc Chemistry
topic_browse	misc QH301-705.5 misc QD1-999 misc <i<Iris germanica</i< L. misc <i<BBX</i< transcription factors misc stress response misc phytohormone misc expression profiling misc Biology (General) misc Chemistry
format_facet	Elektronische Aufsätze Aufsätze Elektronische Ressource
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hierarchy_parent_title	International Journal of Molecular Sciences
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title	Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L.
ctrlnum	(DE-627)DOAJ071074465 (DE-599)DOAJba493b084c9c40b9a98fe786b2272eba
title_full	Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L.
author_sort	Yinjie Wang
journal	International Journal of Molecular Sciences
journalStr	International Journal of Molecular Sciences
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author_browse	Yinjie Wang Yongxia Zhang Qingquan Liu Ting Zhang Xinran Chong Haiyan Yuan
container_volume	22
class	QH301-705.5 QD1-999
format_se	Elektronische Aufsätze
author-letter	Yinjie Wang
doi_str_mv	10.3390/ijms22168793
author2-role	verfasserin
title_sort	genome-wide identification and expression analysis of <i<bbx</i< transcription factors in <i<iris germanica</i< l.
callnumber	QH301-705.5
title_auth	Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L.
abstract	The family of B-box (BBX) transcription factors contains one or two B-BOX domains and sometimes also features a highly conserved CCT domain, which plays important roles in plant growth, development and stress response. Nevertheless, no systematic study of the <i<BBX</i< gene family in <i<Iris germanica</i< L. has been undertaken. In this study, a set of six <i<BBX</i< TF family genes from <i<I. germanica</i< was identified based on transcriptomic sequences, and clustered into three clades according to phylogenetic analysis. A transient expression analysis revealed that all six BBX proteins were localized in the nucleus. A yeast one-hybrid assay demonstrated that <i<IgBBX3</i< has transactivational activity, while <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX4</i<, and <i<IgBBX5</i< have no transcriptional activation ability. The transcript abundance of <i<IgBBXs</i< in different tissues was divided into two major groups. The expression of <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX3</i< and <i<IgBBX5</i< was higher in leaves, whereas <i<IgBBX4</i< and <i<IgBBX6</i< was higher in roots. The stress response patterns of six <i<IgBBX</i< were detected under phytohormone treatments and abiotic stresses. The results of this study lay the basis for further research on the functions of BBX gene family members in plant hormone and stress responses, which will promote their application in <i<I. germanica</i< breeding.
abstractGer	The family of B-box (BBX) transcription factors contains one or two B-BOX domains and sometimes also features a highly conserved CCT domain, which plays important roles in plant growth, development and stress response. Nevertheless, no systematic study of the <i<BBX</i< gene family in <i<Iris germanica</i< L. has been undertaken. In this study, a set of six <i<BBX</i< TF family genes from <i<I. germanica</i< was identified based on transcriptomic sequences, and clustered into three clades according to phylogenetic analysis. A transient expression analysis revealed that all six BBX proteins were localized in the nucleus. A yeast one-hybrid assay demonstrated that <i<IgBBX3</i< has transactivational activity, while <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX4</i<, and <i<IgBBX5</i< have no transcriptional activation ability. The transcript abundance of <i<IgBBXs</i< in different tissues was divided into two major groups. The expression of <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX3</i< and <i<IgBBX5</i< was higher in leaves, whereas <i<IgBBX4</i< and <i<IgBBX6</i< was higher in roots. The stress response patterns of six <i<IgBBX</i< were detected under phytohormone treatments and abiotic stresses. The results of this study lay the basis for further research on the functions of BBX gene family members in plant hormone and stress responses, which will promote their application in <i<I. germanica</i< breeding.
abstract_unstemmed	The family of B-box (BBX) transcription factors contains one or two B-BOX domains and sometimes also features a highly conserved CCT domain, which plays important roles in plant growth, development and stress response. Nevertheless, no systematic study of the <i<BBX</i< gene family in <i<Iris germanica</i< L. has been undertaken. In this study, a set of six <i<BBX</i< TF family genes from <i<I. germanica</i< was identified based on transcriptomic sequences, and clustered into three clades according to phylogenetic analysis. A transient expression analysis revealed that all six BBX proteins were localized in the nucleus. A yeast one-hybrid assay demonstrated that <i<IgBBX3</i< has transactivational activity, while <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX4</i<, and <i<IgBBX5</i< have no transcriptional activation ability. The transcript abundance of <i<IgBBXs</i< in different tissues was divided into two major groups. The expression of <i<IgBBX1</i<, <i<IgBBX2</i<, <i<IgBBX3</i< and <i<IgBBX5</i< was higher in leaves, whereas <i<IgBBX4</i< and <i<IgBBX6</i< was higher in roots. The stress response patterns of six <i<IgBBX</i< were detected under phytohormone treatments and abiotic stresses. The results of this study lay the basis for further research on the functions of BBX gene family members in plant hormone and stress responses, which will promote their application in <i<I. germanica</i< breeding.
collection_details	GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700
container_issue	16, p 8793
title_short	Genome-Wide Identification and Expression Analysis of <i<BBX</i< Transcription Factors in <i<Iris germanica</i< L.
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