General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis

We have previously demonstrated that General Control Non-derepressible 1 (AtGCN1) is essential for translation inhibition under cold stress through interacting with GCN2 to phosphorylate eukaryotic translation initiation factor 2 (eIF2). Here, we report that the flower time of the atgcn1 mutant is l...
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Autor*in:	Xiaona Cui [verfasserIn] Kaili Gao [verfasserIn] Linjuan Wang [verfasserIn] Mengyang Lv [verfasserIn] Ziwen Li [verfasserIn] Donghua Zheng [verfasserIn] Wenwu Wu [verfasserIn] Wen Yao [verfasserIn] Liying Ding [verfasserIn] Xiao Li [verfasserIn] Jian-Kang Zhu [verfasserIn] Hairong Zhang [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2021

Schlagwörter:	protein translation eIF2α phosphorylation GCN2 AtGCN1 cold stress

Übergeordnetes Werk:	In: Frontiers in Plant Science - Frontiers Media S.A., 2011, 12(2021)
Übergeordnetes Werk:	volume:12 ; year:2021

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3389/fpls.2021.630311

Katalog-ID:	DOAJ071745890

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allfields	10.3389/fpls.2021.630311 doi (DE-627)DOAJ071745890 (DE-599)DOAJ1f58ab324bfc4b83ac7265d767f827d9 DE-627 ger DE-627 rakwb eng SB1-1110 Xiaona Cui verfasserin aut General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier We have previously demonstrated that General Control Non-derepressible 1 (AtGCN1) is essential for translation inhibition under cold stress through interacting with GCN2 to phosphorylate eukaryotic translation initiation factor 2 (eIF2). Here, we report that the flower time of the atgcn1 mutant is later than that of the wild type (WT), and some siliques of atgcn1 cannot develop and produce seeds. Total and polysomal RNA of atgcn1-1 and wild type (WT) after cold treatments were sequenced. The sequencing results show that the mutation of atgcn1 selectively alters the expression of genes at both transcriptional and translational levels. The classification of AtGCN1 target genes reveals that AtGCN1 regulated gens are involved in flower development, seed dormancy and seed development, response to osmotic stress, amino acid biosynthesis, photosynthesis, cell wall organization, protein transport and localization, lipid biosynthesis, transcription, macroautophagy, proteolysis and cell death. Further analysis of AtGCN1 regulated genes at translational levels shows that the Kozak sequence and uORFs (upstream open reading frame) of transcripts affect translation selection. These results show that AtGCN1 is required for the expression of selective genes in Arabidopsis. protein translation eIF2α phosphorylation GCN2 AtGCN1 cold stress Plant culture Kaili Gao verfasserin aut Linjuan Wang verfasserin aut Mengyang Lv verfasserin aut Ziwen Li verfasserin aut Donghua Zheng verfasserin aut Wenwu Wu verfasserin aut Wen Yao verfasserin aut Liying Ding verfasserin aut Xiao Li verfasserin aut Jian-Kang Zhu verfasserin aut Jian-Kang Zhu verfasserin aut Hairong Zhang verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 12(2021) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:12 year:2021 https://doi.org/10.3389/fpls.2021.630311 kostenfrei https://doaj.org/article/1f58ab324bfc4b83ac7265d767f827d9 kostenfrei https://www.frontiersin.org/articles/10.3389/fpls.2021.630311/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 12 2021
spelling	10.3389/fpls.2021.630311 doi (DE-627)DOAJ071745890 (DE-599)DOAJ1f58ab324bfc4b83ac7265d767f827d9 DE-627 ger DE-627 rakwb eng SB1-1110 Xiaona Cui verfasserin aut General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier We have previously demonstrated that General Control Non-derepressible 1 (AtGCN1) is essential for translation inhibition under cold stress through interacting with GCN2 to phosphorylate eukaryotic translation initiation factor 2 (eIF2). Here, we report that the flower time of the atgcn1 mutant is later than that of the wild type (WT), and some siliques of atgcn1 cannot develop and produce seeds. Total and polysomal RNA of atgcn1-1 and wild type (WT) after cold treatments were sequenced. The sequencing results show that the mutation of atgcn1 selectively alters the expression of genes at both transcriptional and translational levels. The classification of AtGCN1 target genes reveals that AtGCN1 regulated gens are involved in flower development, seed dormancy and seed development, response to osmotic stress, amino acid biosynthesis, photosynthesis, cell wall organization, protein transport and localization, lipid biosynthesis, transcription, macroautophagy, proteolysis and cell death. Further analysis of AtGCN1 regulated genes at translational levels shows that the Kozak sequence and uORFs (upstream open reading frame) of transcripts affect translation selection. These results show that AtGCN1 is required for the expression of selective genes in Arabidopsis. protein translation eIF2α phosphorylation GCN2 AtGCN1 cold stress Plant culture Kaili Gao verfasserin aut Linjuan Wang verfasserin aut Mengyang Lv verfasserin aut Ziwen Li verfasserin aut Donghua Zheng verfasserin aut Wenwu Wu verfasserin aut Wen Yao verfasserin aut Liying Ding verfasserin aut Xiao Li verfasserin aut Jian-Kang Zhu verfasserin aut Jian-Kang Zhu verfasserin aut Hairong Zhang verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 12(2021) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:12 year:2021 https://doi.org/10.3389/fpls.2021.630311 kostenfrei https://doaj.org/article/1f58ab324bfc4b83ac7265d767f827d9 kostenfrei https://www.frontiersin.org/articles/10.3389/fpls.2021.630311/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 12 2021
allfields_unstemmed	10.3389/fpls.2021.630311 doi (DE-627)DOAJ071745890 (DE-599)DOAJ1f58ab324bfc4b83ac7265d767f827d9 DE-627 ger DE-627 rakwb eng SB1-1110 Xiaona Cui verfasserin aut General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier We have previously demonstrated that General Control Non-derepressible 1 (AtGCN1) is essential for translation inhibition under cold stress through interacting with GCN2 to phosphorylate eukaryotic translation initiation factor 2 (eIF2). Here, we report that the flower time of the atgcn1 mutant is later than that of the wild type (WT), and some siliques of atgcn1 cannot develop and produce seeds. Total and polysomal RNA of atgcn1-1 and wild type (WT) after cold treatments were sequenced. The sequencing results show that the mutation of atgcn1 selectively alters the expression of genes at both transcriptional and translational levels. The classification of AtGCN1 target genes reveals that AtGCN1 regulated gens are involved in flower development, seed dormancy and seed development, response to osmotic stress, amino acid biosynthesis, photosynthesis, cell wall organization, protein transport and localization, lipid biosynthesis, transcription, macroautophagy, proteolysis and cell death. Further analysis of AtGCN1 regulated genes at translational levels shows that the Kozak sequence and uORFs (upstream open reading frame) of transcripts affect translation selection. These results show that AtGCN1 is required for the expression of selective genes in Arabidopsis. protein translation eIF2α phosphorylation GCN2 AtGCN1 cold stress Plant culture Kaili Gao verfasserin aut Linjuan Wang verfasserin aut Mengyang Lv verfasserin aut Ziwen Li verfasserin aut Donghua Zheng verfasserin aut Wenwu Wu verfasserin aut Wen Yao verfasserin aut Liying Ding verfasserin aut Xiao Li verfasserin aut Jian-Kang Zhu verfasserin aut Jian-Kang Zhu verfasserin aut Hairong Zhang verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 12(2021) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:12 year:2021 https://doi.org/10.3389/fpls.2021.630311 kostenfrei https://doaj.org/article/1f58ab324bfc4b83ac7265d767f827d9 kostenfrei https://www.frontiersin.org/articles/10.3389/fpls.2021.630311/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 12 2021
allfieldsGer	10.3389/fpls.2021.630311 doi (DE-627)DOAJ071745890 (DE-599)DOAJ1f58ab324bfc4b83ac7265d767f827d9 DE-627 ger DE-627 rakwb eng SB1-1110 Xiaona Cui verfasserin aut General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier We have previously demonstrated that General Control Non-derepressible 1 (AtGCN1) is essential for translation inhibition under cold stress through interacting with GCN2 to phosphorylate eukaryotic translation initiation factor 2 (eIF2). Here, we report that the flower time of the atgcn1 mutant is later than that of the wild type (WT), and some siliques of atgcn1 cannot develop and produce seeds. Total and polysomal RNA of atgcn1-1 and wild type (WT) after cold treatments were sequenced. The sequencing results show that the mutation of atgcn1 selectively alters the expression of genes at both transcriptional and translational levels. The classification of AtGCN1 target genes reveals that AtGCN1 regulated gens are involved in flower development, seed dormancy and seed development, response to osmotic stress, amino acid biosynthesis, photosynthesis, cell wall organization, protein transport and localization, lipid biosynthesis, transcription, macroautophagy, proteolysis and cell death. Further analysis of AtGCN1 regulated genes at translational levels shows that the Kozak sequence and uORFs (upstream open reading frame) of transcripts affect translation selection. These results show that AtGCN1 is required for the expression of selective genes in Arabidopsis. protein translation eIF2α phosphorylation GCN2 AtGCN1 cold stress Plant culture Kaili Gao verfasserin aut Linjuan Wang verfasserin aut Mengyang Lv verfasserin aut Ziwen Li verfasserin aut Donghua Zheng verfasserin aut Wenwu Wu verfasserin aut Wen Yao verfasserin aut Liying Ding verfasserin aut Xiao Li verfasserin aut Jian-Kang Zhu verfasserin aut Jian-Kang Zhu verfasserin aut Hairong Zhang verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 12(2021) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:12 year:2021 https://doi.org/10.3389/fpls.2021.630311 kostenfrei https://doaj.org/article/1f58ab324bfc4b83ac7265d767f827d9 kostenfrei https://www.frontiersin.org/articles/10.3389/fpls.2021.630311/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 12 2021
allfieldsSound	10.3389/fpls.2021.630311 doi (DE-627)DOAJ071745890 (DE-599)DOAJ1f58ab324bfc4b83ac7265d767f827d9 DE-627 ger DE-627 rakwb eng SB1-1110 Xiaona Cui verfasserin aut General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis 2021 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier We have previously demonstrated that General Control Non-derepressible 1 (AtGCN1) is essential for translation inhibition under cold stress through interacting with GCN2 to phosphorylate eukaryotic translation initiation factor 2 (eIF2). Here, we report that the flower time of the atgcn1 mutant is later than that of the wild type (WT), and some siliques of atgcn1 cannot develop and produce seeds. Total and polysomal RNA of atgcn1-1 and wild type (WT) after cold treatments were sequenced. The sequencing results show that the mutation of atgcn1 selectively alters the expression of genes at both transcriptional and translational levels. The classification of AtGCN1 target genes reveals that AtGCN1 regulated gens are involved in flower development, seed dormancy and seed development, response to osmotic stress, amino acid biosynthesis, photosynthesis, cell wall organization, protein transport and localization, lipid biosynthesis, transcription, macroautophagy, proteolysis and cell death. Further analysis of AtGCN1 regulated genes at translational levels shows that the Kozak sequence and uORFs (upstream open reading frame) of transcripts affect translation selection. These results show that AtGCN1 is required for the expression of selective genes in Arabidopsis. protein translation eIF2α phosphorylation GCN2 AtGCN1 cold stress Plant culture Kaili Gao verfasserin aut Linjuan Wang verfasserin aut Mengyang Lv verfasserin aut Ziwen Li verfasserin aut Donghua Zheng verfasserin aut Wenwu Wu verfasserin aut Wen Yao verfasserin aut Liying Ding verfasserin aut Xiao Li verfasserin aut Jian-Kang Zhu verfasserin aut Jian-Kang Zhu verfasserin aut Hairong Zhang verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 12(2021) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:12 year:2021 https://doi.org/10.3389/fpls.2021.630311 kostenfrei https://doaj.org/article/1f58ab324bfc4b83ac7265d767f827d9 kostenfrei https://www.frontiersin.org/articles/10.3389/fpls.2021.630311/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 12 2021
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authorswithroles_txt_mv	Xiaona Cui @@aut@@ Kaili Gao @@aut@@ Linjuan Wang @@aut@@ Mengyang Lv @@aut@@ Ziwen Li @@aut@@ Donghua Zheng @@aut@@ Wenwu Wu @@aut@@ Wen Yao @@aut@@ Liying Ding @@aut@@ Xiao Li @@aut@@ Jian-Kang Zhu @@aut@@ Hairong Zhang @@aut@@
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callnumber-first	S - Agriculture
author	Xiaona Cui
spellingShingle	Xiaona Cui misc SB1-1110 misc protein translation misc eIF2α phosphorylation misc GCN2 misc AtGCN1 misc cold stress misc Plant culture General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis
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topic_title	SB1-1110 General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis protein translation eIF2α phosphorylation GCN2 AtGCN1 cold stress
topic	misc SB1-1110 misc protein translation misc eIF2α phosphorylation misc GCN2 misc AtGCN1 misc cold stress misc Plant culture
topic_unstemmed	misc SB1-1110 misc protein translation misc eIF2α phosphorylation misc GCN2 misc AtGCN1 misc cold stress misc Plant culture
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title	General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis
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title_full	General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis
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title_sort	general control non-derepressible 1 (atgcn1) is important for flowering time, plant growth, seed development, and the transcription/translation of specific genes in arabidopsis
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title_auth	General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis
abstract	We have previously demonstrated that General Control Non-derepressible 1 (AtGCN1) is essential for translation inhibition under cold stress through interacting with GCN2 to phosphorylate eukaryotic translation initiation factor 2 (eIF2). Here, we report that the flower time of the atgcn1 mutant is later than that of the wild type (WT), and some siliques of atgcn1 cannot develop and produce seeds. Total and polysomal RNA of atgcn1-1 and wild type (WT) after cold treatments were sequenced. The sequencing results show that the mutation of atgcn1 selectively alters the expression of genes at both transcriptional and translational levels. The classification of AtGCN1 target genes reveals that AtGCN1 regulated gens are involved in flower development, seed dormancy and seed development, response to osmotic stress, amino acid biosynthesis, photosynthesis, cell wall organization, protein transport and localization, lipid biosynthesis, transcription, macroautophagy, proteolysis and cell death. Further analysis of AtGCN1 regulated genes at translational levels shows that the Kozak sequence and uORFs (upstream open reading frame) of transcripts affect translation selection. These results show that AtGCN1 is required for the expression of selective genes in Arabidopsis.
abstractGer	We have previously demonstrated that General Control Non-derepressible 1 (AtGCN1) is essential for translation inhibition under cold stress through interacting with GCN2 to phosphorylate eukaryotic translation initiation factor 2 (eIF2). Here, we report that the flower time of the atgcn1 mutant is later than that of the wild type (WT), and some siliques of atgcn1 cannot develop and produce seeds. Total and polysomal RNA of atgcn1-1 and wild type (WT) after cold treatments were sequenced. The sequencing results show that the mutation of atgcn1 selectively alters the expression of genes at both transcriptional and translational levels. The classification of AtGCN1 target genes reveals that AtGCN1 regulated gens are involved in flower development, seed dormancy and seed development, response to osmotic stress, amino acid biosynthesis, photosynthesis, cell wall organization, protein transport and localization, lipid biosynthesis, transcription, macroautophagy, proteolysis and cell death. Further analysis of AtGCN1 regulated genes at translational levels shows that the Kozak sequence and uORFs (upstream open reading frame) of transcripts affect translation selection. These results show that AtGCN1 is required for the expression of selective genes in Arabidopsis.
abstract_unstemmed	We have previously demonstrated that General Control Non-derepressible 1 (AtGCN1) is essential for translation inhibition under cold stress through interacting with GCN2 to phosphorylate eukaryotic translation initiation factor 2 (eIF2). Here, we report that the flower time of the atgcn1 mutant is later than that of the wild type (WT), and some siliques of atgcn1 cannot develop and produce seeds. Total and polysomal RNA of atgcn1-1 and wild type (WT) after cold treatments were sequenced. The sequencing results show that the mutation of atgcn1 selectively alters the expression of genes at both transcriptional and translational levels. The classification of AtGCN1 target genes reveals that AtGCN1 regulated gens are involved in flower development, seed dormancy and seed development, response to osmotic stress, amino acid biosynthesis, photosynthesis, cell wall organization, protein transport and localization, lipid biosynthesis, transcription, macroautophagy, proteolysis and cell death. Further analysis of AtGCN1 regulated genes at translational levels shows that the Kozak sequence and uORFs (upstream open reading frame) of transcripts affect translation selection. These results show that AtGCN1 is required for the expression of selective genes in Arabidopsis.
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title_short	General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis
url	https://doi.org/10.3389/fpls.2021.630311 https://doaj.org/article/1f58ab324bfc4b83ac7265d767f827d9 https://www.frontiersin.org/articles/10.3389/fpls.2021.630311/full https://doaj.org/toc/1664-462X
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up_date	2024-07-03T21:58:20.675Z
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Here, we report that the flower time of the atgcn1 mutant is later than that of the wild type (WT), and some siliques of atgcn1 cannot develop and produce seeds. Total and polysomal RNA of atgcn1-1 and wild type (WT) after cold treatments were sequenced. The sequencing results show that the mutation of atgcn1 selectively alters the expression of genes at both transcriptional and translational levels. The classification of AtGCN1 target genes reveals that AtGCN1 regulated gens are involved in flower development, seed dormancy and seed development, response to osmotic stress, amino acid biosynthesis, photosynthesis, cell wall organization, protein transport and localization, lipid biosynthesis, transcription, macroautophagy, proteolysis and cell death. Further analysis of AtGCN1 regulated genes at translational levels shows that the Kozak sequence and uORFs (upstream open reading frame) of transcripts affect translation selection. 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General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis

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