Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar

<p<Abstract</p< <p<Background</p< <p<Riverine ecosystems, highly sensitive to climate change and human activities, are characterized by rapid environmental change to fluctuating water levels and siltation, causing stress on their biological components. We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development.</p< <p<Results</p< <p<We report that poplar (<it<Populus </it<spp.) has evolved a systems level "stress proteome" in the leaf-stem-root apoplast continuum to counter biotic and abiotic factors. To obtain apoplast proteins from <it<P. deltoides</it<, we developed pressure-chamber and water-displacement methods for leaves and stems, respectively. Analyses of 303 proteins and corresponding transcripts coupled with controlled experiments and bioinformatics demonstrate that poplar depends on constitutive and inducible factors to deal with water, pathogen, and oxidative stress. However, each apoplast possessed a unique set of proteins, indicating that response to stress is partly compartmentalized. Apoplast proteins that are involved in glycolysis, fermentation, and catabolism of sucrose and starch appear to enable poplar to grow normally under water stress. Pathogenesis-related proteins mediating water and pathogen stress in apoplast were particularly abundant and effective in suppressing growth of the most prevalent poplar pathogen <it<Melampsora</it<. Unexpectedly, we found diverse peroxidases that appear to be involved in stress-induced cell wall modification in apoplast, particularly during the growing season. Poplar developed a robust antioxidative system to buffer oxidation in stem apoplast.</p< <p<Conclusion</p< <p<These findings suggest that multistress response in the apoplast constitutes an important adaptive trait for poplar to inhabit dynamic environments and is also a potential mechanism in other riverine plant species.</p< Ausführliche Beschreibung

Gespeichert in:

Autor*in:	Lawrence Amanda M [verfasserIn] Suttle Jeffrey C [verfasserIn] Adeli Ardeshir [verfasserIn] Jawdy Sara [verfasserIn] Drnevich Jenny [verfasserIn] Vandervelde Lindsay [verfasserIn] Pechan Tibor [verfasserIn] Adams Joshua P [verfasserIn] Hsu Chuan-Yu [verfasserIn] Pechanova Olga [verfasserIn] Tschaplinski Timothy J [verfasserIn] Séguin Armand [verfasserIn] Yuceer Cetin [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2010

Übergeordnetes Werk:	In: BMC Genomics - BMC, 2003, 11(2010), 1, p 674
Übergeordnetes Werk:	volume:11 ; year:2010 ; number:1, p 674

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.1186/1471-2164-11-674

Katalog-ID:	DOAJ077035550

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520			\|a <p<Abstract</p< <p<Background</p< <p<Riverine ecosystems, highly sensitive to climate change and human activities, are characterized by rapid environmental change to fluctuating water levels and siltation, causing stress on their biological components. We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development.</p< <p<Results</p< <p<We report that poplar (<it<Populus </it<spp.) has evolved a systems level "stress proteome" in the leaf-stem-root apoplast continuum to counter biotic and abiotic factors. To obtain apoplast proteins from <it<P. deltoides</it<, we developed pressure-chamber and water-displacement methods for leaves and stems, respectively. Analyses of 303 proteins and corresponding transcripts coupled with controlled experiments and bioinformatics demonstrate that poplar depends on constitutive and inducible factors to deal with water, pathogen, and oxidative stress. However, each apoplast possessed a unique set of proteins, indicating that response to stress is partly compartmentalized. Apoplast proteins that are involved in glycolysis, fermentation, and catabolism of sucrose and starch appear to enable poplar to grow normally under water stress. Pathogenesis-related proteins mediating water and pathogen stress in apoplast were particularly abundant and effective in suppressing growth of the most prevalent poplar pathogen <it<Melampsora</it<. Unexpectedly, we found diverse peroxidases that appear to be involved in stress-induced cell wall modification in apoplast, particularly during the growing season. Poplar developed a robust antioxidative system to buffer oxidation in stem apoplast.</p< <p<Conclusion</p< <p<These findings suggest that multistress response in the apoplast constitutes an important adaptive trait for poplar to inhabit dynamic environments and is also a potential mechanism in other riverine plant species.</p<
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author_variant	l a m lam s j c sjc a a aa j s js d j dj v l vl p t pt a j p ajp h c y hcy p o po t t j ttj s a sa y c yc
matchkey_str	article:14712164:2010----::ppatrtoeeeltaetaellrarxotiuetml
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publishDate	2010
allfields	10.1186/1471-2164-11-674 doi (DE-627)DOAJ077035550 (DE-599)DOAJc3c5a64c875046c985955756ff913fa8 DE-627 ger DE-627 rakwb eng TP248.13-248.65 QH426-470 Lawrence Amanda M verfasserin aut Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar 2010 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Abstract</p< <p<Background</p< <p<Riverine ecosystems, highly sensitive to climate change and human activities, are characterized by rapid environmental change to fluctuating water levels and siltation, causing stress on their biological components. We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development.</p< <p<Results</p< <p<We report that poplar (<it<Populus </it<spp.) has evolved a systems level "stress proteome" in the leaf-stem-root apoplast continuum to counter biotic and abiotic factors. To obtain apoplast proteins from <it<P. deltoides</it<, we developed pressure-chamber and water-displacement methods for leaves and stems, respectively. Analyses of 303 proteins and corresponding transcripts coupled with controlled experiments and bioinformatics demonstrate that poplar depends on constitutive and inducible factors to deal with water, pathogen, and oxidative stress. However, each apoplast possessed a unique set of proteins, indicating that response to stress is partly compartmentalized. Apoplast proteins that are involved in glycolysis, fermentation, and catabolism of sucrose and starch appear to enable poplar to grow normally under water stress. Pathogenesis-related proteins mediating water and pathogen stress in apoplast were particularly abundant and effective in suppressing growth of the most prevalent poplar pathogen <it<Melampsora</it<. Unexpectedly, we found diverse peroxidases that appear to be involved in stress-induced cell wall modification in apoplast, particularly during the growing season. Poplar developed a robust antioxidative system to buffer oxidation in stem apoplast.</p< <p<Conclusion</p< <p<These findings suggest that multistress response in the apoplast constitutes an important adaptive trait for poplar to inhabit dynamic environments and is also a potential mechanism in other riverine plant species.</p< Biotechnology Genetics Suttle Jeffrey C verfasserin aut Adeli Ardeshir verfasserin aut Jawdy Sara verfasserin aut Drnevich Jenny verfasserin aut Vandervelde Lindsay verfasserin aut Pechan Tibor verfasserin aut Adams Joshua P verfasserin aut Hsu Chuan-Yu verfasserin aut Pechanova Olga verfasserin aut Tschaplinski Timothy J verfasserin aut Séguin Armand verfasserin aut Yuceer Cetin verfasserin aut In BMC Genomics BMC, 2003 11(2010), 1, p 674 (DE-627)326644954 (DE-600)2041499-7 14712164 nnns volume:11 year:2010 number:1, p 674 https://doi.org/10.1186/1471-2164-11-674 kostenfrei https://doaj.org/article/c3c5a64c875046c985955756ff913fa8 kostenfrei http://www.biomedcentral.com/1471-2164/11/674 kostenfrei https://doaj.org/toc/1471-2164 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 11 2010 1, p 674
spelling	10.1186/1471-2164-11-674 doi (DE-627)DOAJ077035550 (DE-599)DOAJc3c5a64c875046c985955756ff913fa8 DE-627 ger DE-627 rakwb eng TP248.13-248.65 QH426-470 Lawrence Amanda M verfasserin aut Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar 2010 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Abstract</p< <p<Background</p< <p<Riverine ecosystems, highly sensitive to climate change and human activities, are characterized by rapid environmental change to fluctuating water levels and siltation, causing stress on their biological components. We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development.</p< <p<Results</p< <p<We report that poplar (<it<Populus </it<spp.) has evolved a systems level "stress proteome" in the leaf-stem-root apoplast continuum to counter biotic and abiotic factors. To obtain apoplast proteins from <it<P. deltoides</it<, we developed pressure-chamber and water-displacement methods for leaves and stems, respectively. Analyses of 303 proteins and corresponding transcripts coupled with controlled experiments and bioinformatics demonstrate that poplar depends on constitutive and inducible factors to deal with water, pathogen, and oxidative stress. However, each apoplast possessed a unique set of proteins, indicating that response to stress is partly compartmentalized. Apoplast proteins that are involved in glycolysis, fermentation, and catabolism of sucrose and starch appear to enable poplar to grow normally under water stress. Pathogenesis-related proteins mediating water and pathogen stress in apoplast were particularly abundant and effective in suppressing growth of the most prevalent poplar pathogen <it<Melampsora</it<. Unexpectedly, we found diverse peroxidases that appear to be involved in stress-induced cell wall modification in apoplast, particularly during the growing season. Poplar developed a robust antioxidative system to buffer oxidation in stem apoplast.</p< <p<Conclusion</p< <p<These findings suggest that multistress response in the apoplast constitutes an important adaptive trait for poplar to inhabit dynamic environments and is also a potential mechanism in other riverine plant species.</p< Biotechnology Genetics Suttle Jeffrey C verfasserin aut Adeli Ardeshir verfasserin aut Jawdy Sara verfasserin aut Drnevich Jenny verfasserin aut Vandervelde Lindsay verfasserin aut Pechan Tibor verfasserin aut Adams Joshua P verfasserin aut Hsu Chuan-Yu verfasserin aut Pechanova Olga verfasserin aut Tschaplinski Timothy J verfasserin aut Séguin Armand verfasserin aut Yuceer Cetin verfasserin aut In BMC Genomics BMC, 2003 11(2010), 1, p 674 (DE-627)326644954 (DE-600)2041499-7 14712164 nnns volume:11 year:2010 number:1, p 674 https://doi.org/10.1186/1471-2164-11-674 kostenfrei https://doaj.org/article/c3c5a64c875046c985955756ff913fa8 kostenfrei http://www.biomedcentral.com/1471-2164/11/674 kostenfrei https://doaj.org/toc/1471-2164 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 11 2010 1, p 674
allfields_unstemmed	10.1186/1471-2164-11-674 doi (DE-627)DOAJ077035550 (DE-599)DOAJc3c5a64c875046c985955756ff913fa8 DE-627 ger DE-627 rakwb eng TP248.13-248.65 QH426-470 Lawrence Amanda M verfasserin aut Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar 2010 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Abstract</p< <p<Background</p< <p<Riverine ecosystems, highly sensitive to climate change and human activities, are characterized by rapid environmental change to fluctuating water levels and siltation, causing stress on their biological components. We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development.</p< <p<Results</p< <p<We report that poplar (<it<Populus </it<spp.) has evolved a systems level "stress proteome" in the leaf-stem-root apoplast continuum to counter biotic and abiotic factors. To obtain apoplast proteins from <it<P. deltoides</it<, we developed pressure-chamber and water-displacement methods for leaves and stems, respectively. Analyses of 303 proteins and corresponding transcripts coupled with controlled experiments and bioinformatics demonstrate that poplar depends on constitutive and inducible factors to deal with water, pathogen, and oxidative stress. However, each apoplast possessed a unique set of proteins, indicating that response to stress is partly compartmentalized. Apoplast proteins that are involved in glycolysis, fermentation, and catabolism of sucrose and starch appear to enable poplar to grow normally under water stress. Pathogenesis-related proteins mediating water and pathogen stress in apoplast were particularly abundant and effective in suppressing growth of the most prevalent poplar pathogen <it<Melampsora</it<. Unexpectedly, we found diverse peroxidases that appear to be involved in stress-induced cell wall modification in apoplast, particularly during the growing season. Poplar developed a robust antioxidative system to buffer oxidation in stem apoplast.</p< <p<Conclusion</p< <p<These findings suggest that multistress response in the apoplast constitutes an important adaptive trait for poplar to inhabit dynamic environments and is also a potential mechanism in other riverine plant species.</p< Biotechnology Genetics Suttle Jeffrey C verfasserin aut Adeli Ardeshir verfasserin aut Jawdy Sara verfasserin aut Drnevich Jenny verfasserin aut Vandervelde Lindsay verfasserin aut Pechan Tibor verfasserin aut Adams Joshua P verfasserin aut Hsu Chuan-Yu verfasserin aut Pechanova Olga verfasserin aut Tschaplinski Timothy J verfasserin aut Séguin Armand verfasserin aut Yuceer Cetin verfasserin aut In BMC Genomics BMC, 2003 11(2010), 1, p 674 (DE-627)326644954 (DE-600)2041499-7 14712164 nnns volume:11 year:2010 number:1, p 674 https://doi.org/10.1186/1471-2164-11-674 kostenfrei https://doaj.org/article/c3c5a64c875046c985955756ff913fa8 kostenfrei http://www.biomedcentral.com/1471-2164/11/674 kostenfrei https://doaj.org/toc/1471-2164 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 11 2010 1, p 674
allfieldsGer	10.1186/1471-2164-11-674 doi (DE-627)DOAJ077035550 (DE-599)DOAJc3c5a64c875046c985955756ff913fa8 DE-627 ger DE-627 rakwb eng TP248.13-248.65 QH426-470 Lawrence Amanda M verfasserin aut Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar 2010 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Abstract</p< <p<Background</p< <p<Riverine ecosystems, highly sensitive to climate change and human activities, are characterized by rapid environmental change to fluctuating water levels and siltation, causing stress on their biological components. We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development.</p< <p<Results</p< <p<We report that poplar (<it<Populus </it<spp.) has evolved a systems level "stress proteome" in the leaf-stem-root apoplast continuum to counter biotic and abiotic factors. To obtain apoplast proteins from <it<P. deltoides</it<, we developed pressure-chamber and water-displacement methods for leaves and stems, respectively. Analyses of 303 proteins and corresponding transcripts coupled with controlled experiments and bioinformatics demonstrate that poplar depends on constitutive and inducible factors to deal with water, pathogen, and oxidative stress. However, each apoplast possessed a unique set of proteins, indicating that response to stress is partly compartmentalized. Apoplast proteins that are involved in glycolysis, fermentation, and catabolism of sucrose and starch appear to enable poplar to grow normally under water stress. Pathogenesis-related proteins mediating water and pathogen stress in apoplast were particularly abundant and effective in suppressing growth of the most prevalent poplar pathogen <it<Melampsora</it<. Unexpectedly, we found diverse peroxidases that appear to be involved in stress-induced cell wall modification in apoplast, particularly during the growing season. Poplar developed a robust antioxidative system to buffer oxidation in stem apoplast.</p< <p<Conclusion</p< <p<These findings suggest that multistress response in the apoplast constitutes an important adaptive trait for poplar to inhabit dynamic environments and is also a potential mechanism in other riverine plant species.</p< Biotechnology Genetics Suttle Jeffrey C verfasserin aut Adeli Ardeshir verfasserin aut Jawdy Sara verfasserin aut Drnevich Jenny verfasserin aut Vandervelde Lindsay verfasserin aut Pechan Tibor verfasserin aut Adams Joshua P verfasserin aut Hsu Chuan-Yu verfasserin aut Pechanova Olga verfasserin aut Tschaplinski Timothy J verfasserin aut Séguin Armand verfasserin aut Yuceer Cetin verfasserin aut In BMC Genomics BMC, 2003 11(2010), 1, p 674 (DE-627)326644954 (DE-600)2041499-7 14712164 nnns volume:11 year:2010 number:1, p 674 https://doi.org/10.1186/1471-2164-11-674 kostenfrei https://doaj.org/article/c3c5a64c875046c985955756ff913fa8 kostenfrei http://www.biomedcentral.com/1471-2164/11/674 kostenfrei https://doaj.org/toc/1471-2164 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 11 2010 1, p 674
allfieldsSound	10.1186/1471-2164-11-674 doi (DE-627)DOAJ077035550 (DE-599)DOAJc3c5a64c875046c985955756ff913fa8 DE-627 ger DE-627 rakwb eng TP248.13-248.65 QH426-470 Lawrence Amanda M verfasserin aut Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar 2010 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <p<Abstract</p< <p<Background</p< <p<Riverine ecosystems, highly sensitive to climate change and human activities, are characterized by rapid environmental change to fluctuating water levels and siltation, causing stress on their biological components. We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development.</p< <p<Results</p< <p<We report that poplar (<it<Populus </it<spp.) has evolved a systems level "stress proteome" in the leaf-stem-root apoplast continuum to counter biotic and abiotic factors. To obtain apoplast proteins from <it<P. deltoides</it<, we developed pressure-chamber and water-displacement methods for leaves and stems, respectively. Analyses of 303 proteins and corresponding transcripts coupled with controlled experiments and bioinformatics demonstrate that poplar depends on constitutive and inducible factors to deal with water, pathogen, and oxidative stress. However, each apoplast possessed a unique set of proteins, indicating that response to stress is partly compartmentalized. Apoplast proteins that are involved in glycolysis, fermentation, and catabolism of sucrose and starch appear to enable poplar to grow normally under water stress. Pathogenesis-related proteins mediating water and pathogen stress in apoplast were particularly abundant and effective in suppressing growth of the most prevalent poplar pathogen <it<Melampsora</it<. Unexpectedly, we found diverse peroxidases that appear to be involved in stress-induced cell wall modification in apoplast, particularly during the growing season. Poplar developed a robust antioxidative system to buffer oxidation in stem apoplast.</p< <p<Conclusion</p< <p<These findings suggest that multistress response in the apoplast constitutes an important adaptive trait for poplar to inhabit dynamic environments and is also a potential mechanism in other riverine plant species.</p< Biotechnology Genetics Suttle Jeffrey C verfasserin aut Adeli Ardeshir verfasserin aut Jawdy Sara verfasserin aut Drnevich Jenny verfasserin aut Vandervelde Lindsay verfasserin aut Pechan Tibor verfasserin aut Adams Joshua P verfasserin aut Hsu Chuan-Yu verfasserin aut Pechanova Olga verfasserin aut Tschaplinski Timothy J verfasserin aut Séguin Armand verfasserin aut Yuceer Cetin verfasserin aut In BMC Genomics BMC, 2003 11(2010), 1, p 674 (DE-627)326644954 (DE-600)2041499-7 14712164 nnns volume:11 year:2010 number:1, p 674 https://doi.org/10.1186/1471-2164-11-674 kostenfrei https://doaj.org/article/c3c5a64c875046c985955756ff913fa8 kostenfrei http://www.biomedcentral.com/1471-2164/11/674 kostenfrei https://doaj.org/toc/1471-2164 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2031 GBV_ILN_2038 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2061 GBV_ILN_2111 GBV_ILN_2113 GBV_ILN_2190 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 11 2010 1, p 674
language	English
source	In BMC Genomics 11(2010), 1, p 674 volume:11 year:2010 number:1, p 674
sourceStr	In BMC Genomics 11(2010), 1, p 674 volume:11 year:2010 number:1, p 674
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	Biotechnology Genetics
isfreeaccess_bool	true
container_title	BMC Genomics
authorswithroles_txt_mv	Lawrence Amanda M @@aut@@ Suttle Jeffrey C @@aut@@ Adeli Ardeshir @@aut@@ Jawdy Sara @@aut@@ Drnevich Jenny @@aut@@ Vandervelde Lindsay @@aut@@ Pechan Tibor @@aut@@ Adams Joshua P @@aut@@ Hsu Chuan-Yu @@aut@@ Pechanova Olga @@aut@@ Tschaplinski Timothy J @@aut@@ Séguin Armand @@aut@@ Yuceer Cetin @@aut@@
publishDateDaySort_date	2010-01-01T00:00:00Z
hierarchy_top_id	326644954
id	DOAJ077035550
language_de	englisch
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callnumber-first	T - Technology
author	Lawrence Amanda M
spellingShingle	Lawrence Amanda M misc TP248.13-248.65 misc QH426-470 misc Biotechnology misc Genetics Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar
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topic_title	TP248.13-248.65 QH426-470 Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar
topic	misc TP248.13-248.65 misc QH426-470 misc Biotechnology misc Genetics
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title	Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar
ctrlnum	(DE-627)DOAJ077035550 (DE-599)DOAJc3c5a64c875046c985955756ff913fa8
title_full	Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar
author_sort	Lawrence Amanda M
journal	BMC Genomics
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author_browse	Lawrence Amanda M Suttle Jeffrey C Adeli Ardeshir Jawdy Sara Drnevich Jenny Vandervelde Lindsay Pechan Tibor Adams Joshua P Hsu Chuan-Yu Pechanova Olga Tschaplinski Timothy J Séguin Armand Yuceer Cetin
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author-letter	Lawrence Amanda M
doi_str_mv	10.1186/1471-2164-11-674
author2-role	verfasserin
title_sort	apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar
callnumber	TP248.13-248.65
title_auth	Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar
abstract	<p<Abstract</p< <p<Background</p< <p<Riverine ecosystems, highly sensitive to climate change and human activities, are characterized by rapid environmental change to fluctuating water levels and siltation, causing stress on their biological components. We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development.</p< <p<Results</p< <p<We report that poplar (<it<Populus </it<spp.) has evolved a systems level "stress proteome" in the leaf-stem-root apoplast continuum to counter biotic and abiotic factors. To obtain apoplast proteins from <it<P. deltoides</it<, we developed pressure-chamber and water-displacement methods for leaves and stems, respectively. Analyses of 303 proteins and corresponding transcripts coupled with controlled experiments and bioinformatics demonstrate that poplar depends on constitutive and inducible factors to deal with water, pathogen, and oxidative stress. However, each apoplast possessed a unique set of proteins, indicating that response to stress is partly compartmentalized. Apoplast proteins that are involved in glycolysis, fermentation, and catabolism of sucrose and starch appear to enable poplar to grow normally under water stress. Pathogenesis-related proteins mediating water and pathogen stress in apoplast were particularly abundant and effective in suppressing growth of the most prevalent poplar pathogen <it<Melampsora</it<. Unexpectedly, we found diverse peroxidases that appear to be involved in stress-induced cell wall modification in apoplast, particularly during the growing season. Poplar developed a robust antioxidative system to buffer oxidation in stem apoplast.</p< <p<Conclusion</p< <p<These findings suggest that multistress response in the apoplast constitutes an important adaptive trait for poplar to inhabit dynamic environments and is also a potential mechanism in other riverine plant species.</p<
abstractGer	<p<Abstract</p< <p<Background</p< <p<Riverine ecosystems, highly sensitive to climate change and human activities, are characterized by rapid environmental change to fluctuating water levels and siltation, causing stress on their biological components. We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development.</p< <p<Results</p< <p<We report that poplar (<it<Populus </it<spp.) has evolved a systems level "stress proteome" in the leaf-stem-root apoplast continuum to counter biotic and abiotic factors. To obtain apoplast proteins from <it<P. deltoides</it<, we developed pressure-chamber and water-displacement methods for leaves and stems, respectively. Analyses of 303 proteins and corresponding transcripts coupled with controlled experiments and bioinformatics demonstrate that poplar depends on constitutive and inducible factors to deal with water, pathogen, and oxidative stress. However, each apoplast possessed a unique set of proteins, indicating that response to stress is partly compartmentalized. Apoplast proteins that are involved in glycolysis, fermentation, and catabolism of sucrose and starch appear to enable poplar to grow normally under water stress. Pathogenesis-related proteins mediating water and pathogen stress in apoplast were particularly abundant and effective in suppressing growth of the most prevalent poplar pathogen <it<Melampsora</it<. Unexpectedly, we found diverse peroxidases that appear to be involved in stress-induced cell wall modification in apoplast, particularly during the growing season. Poplar developed a robust antioxidative system to buffer oxidation in stem apoplast.</p< <p<Conclusion</p< <p<These findings suggest that multistress response in the apoplast constitutes an important adaptive trait for poplar to inhabit dynamic environments and is also a potential mechanism in other riverine plant species.</p<
abstract_unstemmed	<p<Abstract</p< <p<Background</p< <p<Riverine ecosystems, highly sensitive to climate change and human activities, are characterized by rapid environmental change to fluctuating water levels and siltation, causing stress on their biological components. We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development.</p< <p<Results</p< <p<We report that poplar (<it<Populus </it<spp.) has evolved a systems level "stress proteome" in the leaf-stem-root apoplast continuum to counter biotic and abiotic factors. To obtain apoplast proteins from <it<P. deltoides</it<, we developed pressure-chamber and water-displacement methods for leaves and stems, respectively. Analyses of 303 proteins and corresponding transcripts coupled with controlled experiments and bioinformatics demonstrate that poplar depends on constitutive and inducible factors to deal with water, pathogen, and oxidative stress. However, each apoplast possessed a unique set of proteins, indicating that response to stress is partly compartmentalized. Apoplast proteins that are involved in glycolysis, fermentation, and catabolism of sucrose and starch appear to enable poplar to grow normally under water stress. Pathogenesis-related proteins mediating water and pathogen stress in apoplast were particularly abundant and effective in suppressing growth of the most prevalent poplar pathogen <it<Melampsora</it<. Unexpectedly, we found diverse peroxidases that appear to be involved in stress-induced cell wall modification in apoplast, particularly during the growing season. Poplar developed a robust antioxidative system to buffer oxidation in stem apoplast.</p< <p<Conclusion</p< <p<These findings suggest that multistress response in the apoplast constitutes an important adaptive trait for poplar to inhabit dynamic environments and is also a potential mechanism in other riverine plant species.</p<
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title_short	Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar
url	https://doi.org/10.1186/1471-2164-11-674 https://doaj.org/article/c3c5a64c875046c985955756ff913fa8 http://www.biomedcentral.com/1471-2164/11/674 https://doaj.org/toc/1471-2164
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Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar

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