Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets

It is well accepted that the gut microbiota of breast-fed (BF) and formula-fed (FF) infants are significantly different. However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The pre...
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Autor*in:	Jie Zhang [verfasserIn] Xi Long [verfasserIn] Qinfeng Liao [verfasserIn] Jie Chai [verfasserIn] Tinghuan Zhang [verfasserIn] Li Chen [verfasserIn] Hang He [verfasserIn] Yancong Yuan [verfasserIn] Kun Wan [verfasserIn] Jinyong Wang [verfasserIn] Anfang Liu [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2022

Schlagwörter:	piglets breast-fed formula-fed gut microbiota

Übergeordnetes Werk:	In: Genes - MDPI AG, 2010, 14(2022), 1, p 49
Übergeordnetes Werk:	volume:14 ; year:2022 ; number:1, p 49

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3390/genes14010049

Katalog-ID:	DOAJ081798822

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520			\|a It is well accepted that the gut microbiota of breast-fed (BF) and formula-fed (FF) infants are significantly different. However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The present study identified the differences in gut microbiota composition between BF- and FF-weaned Rongchang piglets at 30 days old, using pair-end sequencing on the Illumina HiSeq 2500 platform. The BF piglets had lower microbiota diversities than FF piglets (<i<p</i< < 0.05), and the community structures were well clustered as a result of each feeding pattern. Firmicutes and Bacteroidetes represented the most dominant phyla, and <i<Ruminococcus</i<, <i<Prevotella</i<, and <i<Gemmiger</i< were prominent genera in all piglets. <i<Ruminococcus</i<, <i<Prevotella</i<, <i<Oscillospira</i<, <i<Eubacterium</i<, <i<Gemmiger</i<, <i<Dorea</i<, and <i<Lactobacillus</i< populations were significantly higher, while <i<Treponema</i< and <i<Coprococcus</i< were significantly lower in BF piglets compared to FF piglets (<i<p</i< < 0.05). The metabolism pathways in the BF piglets were significantly different from FF piglets, which included carbohydrate and amino acid metabolism (<i<p</i< < 0.05). In addition, the top 10 abundance of microbiota were more or less significantly associated with the two phenotypes (<i<p</i< < 0.05). Collectively, these findings provide probable explanations for the importance of BF in neonates and support a theoretical basis for feeding regimes in indigenous Chinese piglets.
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allfields	10.3390/genes14010049 doi (DE-627)DOAJ081798822 (DE-599)DOAJe8c56fb849424baf85b248d4ff393876 DE-627 ger DE-627 rakwb eng QH426-470 Jie Zhang verfasserin aut Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier It is well accepted that the gut microbiota of breast-fed (BF) and formula-fed (FF) infants are significantly different. However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The present study identified the differences in gut microbiota composition between BF- and FF-weaned Rongchang piglets at 30 days old, using pair-end sequencing on the Illumina HiSeq 2500 platform. The BF piglets had lower microbiota diversities than FF piglets (<i<p</i< < 0.05), and the community structures were well clustered as a result of each feeding pattern. Firmicutes and Bacteroidetes represented the most dominant phyla, and <i<Ruminococcus</i<, <i<Prevotella</i<, and <i<Gemmiger</i< were prominent genera in all piglets. <i<Ruminococcus</i<, <i<Prevotella</i<, <i<Oscillospira</i<, <i<Eubacterium</i<, <i<Gemmiger</i<, <i<Dorea</i<, and <i<Lactobacillus</i< populations were significantly higher, while <i<Treponema</i< and <i<Coprococcus</i< were significantly lower in BF piglets compared to FF piglets (<i<p</i< < 0.05). The metabolism pathways in the BF piglets were significantly different from FF piglets, which included carbohydrate and amino acid metabolism (<i<p</i< < 0.05). In addition, the top 10 abundance of microbiota were more or less significantly associated with the two phenotypes (<i<p</i< < 0.05). Collectively, these findings provide probable explanations for the importance of BF in neonates and support a theoretical basis for feeding regimes in indigenous Chinese piglets. piglets breast-fed formula-fed gut microbiota Genetics Xi Long verfasserin aut Qinfeng Liao verfasserin aut Jie Chai verfasserin aut Tinghuan Zhang verfasserin aut Li Chen verfasserin aut Hang He verfasserin aut Yancong Yuan verfasserin aut Kun Wan verfasserin aut Jinyong Wang verfasserin aut Anfang Liu verfasserin aut In Genes MDPI AG, 2010 14(2022), 1, p 49 (DE-627)614096537 (DE-600)2527218-4 20734425 nnns volume:14 year:2022 number:1, p 49 https://doi.org/10.3390/genes14010049 kostenfrei https://doaj.org/article/e8c56fb849424baf85b248d4ff393876 kostenfrei https://www.mdpi.com/2073-4425/14/1/49 kostenfrei https://doaj.org/toc/2073-4425 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 14 2022 1, p 49
spelling	10.3390/genes14010049 doi (DE-627)DOAJ081798822 (DE-599)DOAJe8c56fb849424baf85b248d4ff393876 DE-627 ger DE-627 rakwb eng QH426-470 Jie Zhang verfasserin aut Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier It is well accepted that the gut microbiota of breast-fed (BF) and formula-fed (FF) infants are significantly different. However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The present study identified the differences in gut microbiota composition between BF- and FF-weaned Rongchang piglets at 30 days old, using pair-end sequencing on the Illumina HiSeq 2500 platform. The BF piglets had lower microbiota diversities than FF piglets (<i<p</i< < 0.05), and the community structures were well clustered as a result of each feeding pattern. Firmicutes and Bacteroidetes represented the most dominant phyla, and <i<Ruminococcus</i<, <i<Prevotella</i<, and <i<Gemmiger</i< were prominent genera in all piglets. <i<Ruminococcus</i<, <i<Prevotella</i<, <i<Oscillospira</i<, <i<Eubacterium</i<, <i<Gemmiger</i<, <i<Dorea</i<, and <i<Lactobacillus</i< populations were significantly higher, while <i<Treponema</i< and <i<Coprococcus</i< were significantly lower in BF piglets compared to FF piglets (<i<p</i< < 0.05). The metabolism pathways in the BF piglets were significantly different from FF piglets, which included carbohydrate and amino acid metabolism (<i<p</i< < 0.05). In addition, the top 10 abundance of microbiota were more or less significantly associated with the two phenotypes (<i<p</i< < 0.05). Collectively, these findings provide probable explanations for the importance of BF in neonates and support a theoretical basis for feeding regimes in indigenous Chinese piglets. piglets breast-fed formula-fed gut microbiota Genetics Xi Long verfasserin aut Qinfeng Liao verfasserin aut Jie Chai verfasserin aut Tinghuan Zhang verfasserin aut Li Chen verfasserin aut Hang He verfasserin aut Yancong Yuan verfasserin aut Kun Wan verfasserin aut Jinyong Wang verfasserin aut Anfang Liu verfasserin aut In Genes MDPI AG, 2010 14(2022), 1, p 49 (DE-627)614096537 (DE-600)2527218-4 20734425 nnns volume:14 year:2022 number:1, p 49 https://doi.org/10.3390/genes14010049 kostenfrei https://doaj.org/article/e8c56fb849424baf85b248d4ff393876 kostenfrei https://www.mdpi.com/2073-4425/14/1/49 kostenfrei https://doaj.org/toc/2073-4425 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 14 2022 1, p 49
allfields_unstemmed	10.3390/genes14010049 doi (DE-627)DOAJ081798822 (DE-599)DOAJe8c56fb849424baf85b248d4ff393876 DE-627 ger DE-627 rakwb eng QH426-470 Jie Zhang verfasserin aut Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier It is well accepted that the gut microbiota of breast-fed (BF) and formula-fed (FF) infants are significantly different. However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The present study identified the differences in gut microbiota composition between BF- and FF-weaned Rongchang piglets at 30 days old, using pair-end sequencing on the Illumina HiSeq 2500 platform. The BF piglets had lower microbiota diversities than FF piglets (<i<p</i< < 0.05), and the community structures were well clustered as a result of each feeding pattern. Firmicutes and Bacteroidetes represented the most dominant phyla, and <i<Ruminococcus</i<, <i<Prevotella</i<, and <i<Gemmiger</i< were prominent genera in all piglets. <i<Ruminococcus</i<, <i<Prevotella</i<, <i<Oscillospira</i<, <i<Eubacterium</i<, <i<Gemmiger</i<, <i<Dorea</i<, and <i<Lactobacillus</i< populations were significantly higher, while <i<Treponema</i< and <i<Coprococcus</i< were significantly lower in BF piglets compared to FF piglets (<i<p</i< < 0.05). The metabolism pathways in the BF piglets were significantly different from FF piglets, which included carbohydrate and amino acid metabolism (<i<p</i< < 0.05). In addition, the top 10 abundance of microbiota were more or less significantly associated with the two phenotypes (<i<p</i< < 0.05). Collectively, these findings provide probable explanations for the importance of BF in neonates and support a theoretical basis for feeding regimes in indigenous Chinese piglets. piglets breast-fed formula-fed gut microbiota Genetics Xi Long verfasserin aut Qinfeng Liao verfasserin aut Jie Chai verfasserin aut Tinghuan Zhang verfasserin aut Li Chen verfasserin aut Hang He verfasserin aut Yancong Yuan verfasserin aut Kun Wan verfasserin aut Jinyong Wang verfasserin aut Anfang Liu verfasserin aut In Genes MDPI AG, 2010 14(2022), 1, p 49 (DE-627)614096537 (DE-600)2527218-4 20734425 nnns volume:14 year:2022 number:1, p 49 https://doi.org/10.3390/genes14010049 kostenfrei https://doaj.org/article/e8c56fb849424baf85b248d4ff393876 kostenfrei https://www.mdpi.com/2073-4425/14/1/49 kostenfrei https://doaj.org/toc/2073-4425 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 14 2022 1, p 49
allfieldsGer	10.3390/genes14010049 doi (DE-627)DOAJ081798822 (DE-599)DOAJe8c56fb849424baf85b248d4ff393876 DE-627 ger DE-627 rakwb eng QH426-470 Jie Zhang verfasserin aut Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier It is well accepted that the gut microbiota of breast-fed (BF) and formula-fed (FF) infants are significantly different. However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The present study identified the differences in gut microbiota composition between BF- and FF-weaned Rongchang piglets at 30 days old, using pair-end sequencing on the Illumina HiSeq 2500 platform. The BF piglets had lower microbiota diversities than FF piglets (<i<p</i< < 0.05), and the community structures were well clustered as a result of each feeding pattern. Firmicutes and Bacteroidetes represented the most dominant phyla, and <i<Ruminococcus</i<, <i<Prevotella</i<, and <i<Gemmiger</i< were prominent genera in all piglets. <i<Ruminococcus</i<, <i<Prevotella</i<, <i<Oscillospira</i<, <i<Eubacterium</i<, <i<Gemmiger</i<, <i<Dorea</i<, and <i<Lactobacillus</i< populations were significantly higher, while <i<Treponema</i< and <i<Coprococcus</i< were significantly lower in BF piglets compared to FF piglets (<i<p</i< < 0.05). The metabolism pathways in the BF piglets were significantly different from FF piglets, which included carbohydrate and amino acid metabolism (<i<p</i< < 0.05). In addition, the top 10 abundance of microbiota were more or less significantly associated with the two phenotypes (<i<p</i< < 0.05). Collectively, these findings provide probable explanations for the importance of BF in neonates and support a theoretical basis for feeding regimes in indigenous Chinese piglets. piglets breast-fed formula-fed gut microbiota Genetics Xi Long verfasserin aut Qinfeng Liao verfasserin aut Jie Chai verfasserin aut Tinghuan Zhang verfasserin aut Li Chen verfasserin aut Hang He verfasserin aut Yancong Yuan verfasserin aut Kun Wan verfasserin aut Jinyong Wang verfasserin aut Anfang Liu verfasserin aut In Genes MDPI AG, 2010 14(2022), 1, p 49 (DE-627)614096537 (DE-600)2527218-4 20734425 nnns volume:14 year:2022 number:1, p 49 https://doi.org/10.3390/genes14010049 kostenfrei https://doaj.org/article/e8c56fb849424baf85b248d4ff393876 kostenfrei https://www.mdpi.com/2073-4425/14/1/49 kostenfrei https://doaj.org/toc/2073-4425 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 14 2022 1, p 49
allfieldsSound	10.3390/genes14010049 doi (DE-627)DOAJ081798822 (DE-599)DOAJe8c56fb849424baf85b248d4ff393876 DE-627 ger DE-627 rakwb eng QH426-470 Jie Zhang verfasserin aut Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier It is well accepted that the gut microbiota of breast-fed (BF) and formula-fed (FF) infants are significantly different. However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The present study identified the differences in gut microbiota composition between BF- and FF-weaned Rongchang piglets at 30 days old, using pair-end sequencing on the Illumina HiSeq 2500 platform. The BF piglets had lower microbiota diversities than FF piglets (<i<p</i< < 0.05), and the community structures were well clustered as a result of each feeding pattern. Firmicutes and Bacteroidetes represented the most dominant phyla, and <i<Ruminococcus</i<, <i<Prevotella</i<, and <i<Gemmiger</i< were prominent genera in all piglets. <i<Ruminococcus</i<, <i<Prevotella</i<, <i<Oscillospira</i<, <i<Eubacterium</i<, <i<Gemmiger</i<, <i<Dorea</i<, and <i<Lactobacillus</i< populations were significantly higher, while <i<Treponema</i< and <i<Coprococcus</i< were significantly lower in BF piglets compared to FF piglets (<i<p</i< < 0.05). The metabolism pathways in the BF piglets were significantly different from FF piglets, which included carbohydrate and amino acid metabolism (<i<p</i< < 0.05). In addition, the top 10 abundance of microbiota were more or less significantly associated with the two phenotypes (<i<p</i< < 0.05). Collectively, these findings provide probable explanations for the importance of BF in neonates and support a theoretical basis for feeding regimes in indigenous Chinese piglets. piglets breast-fed formula-fed gut microbiota Genetics Xi Long verfasserin aut Qinfeng Liao verfasserin aut Jie Chai verfasserin aut Tinghuan Zhang verfasserin aut Li Chen verfasserin aut Hang He verfasserin aut Yancong Yuan verfasserin aut Kun Wan verfasserin aut Jinyong Wang verfasserin aut Anfang Liu verfasserin aut In Genes MDPI AG, 2010 14(2022), 1, p 49 (DE-627)614096537 (DE-600)2527218-4 20734425 nnns volume:14 year:2022 number:1, p 49 https://doi.org/10.3390/genes14010049 kostenfrei https://doaj.org/article/e8c56fb849424baf85b248d4ff393876 kostenfrei https://www.mdpi.com/2073-4425/14/1/49 kostenfrei https://doaj.org/toc/2073-4425 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 14 2022 1, p 49
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callnumber-first	Q - Science
author	Jie Zhang
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topic_title	QH426-470 Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets piglets breast-fed formula-fed gut microbiota
topic	misc QH426-470 misc piglets misc breast-fed misc formula-fed misc gut microbiota misc Genetics
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title	Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets
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title_full	Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets
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title_sort	distinct gut microbiome induced by different feeding regimes in weaned piglets
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title_auth	Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets
abstract	It is well accepted that the gut microbiota of breast-fed (BF) and formula-fed (FF) infants are significantly different. However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The present study identified the differences in gut microbiota composition between BF- and FF-weaned Rongchang piglets at 30 days old, using pair-end sequencing on the Illumina HiSeq 2500 platform. The BF piglets had lower microbiota diversities than FF piglets (<i<p</i< < 0.05), and the community structures were well clustered as a result of each feeding pattern. Firmicutes and Bacteroidetes represented the most dominant phyla, and <i<Ruminococcus</i<, <i<Prevotella</i<, and <i<Gemmiger</i< were prominent genera in all piglets. <i<Ruminococcus</i<, <i<Prevotella</i<, <i<Oscillospira</i<, <i<Eubacterium</i<, <i<Gemmiger</i<, <i<Dorea</i<, and <i<Lactobacillus</i< populations were significantly higher, while <i<Treponema</i< and <i<Coprococcus</i< were significantly lower in BF piglets compared to FF piglets (<i<p</i< < 0.05). The metabolism pathways in the BF piglets were significantly different from FF piglets, which included carbohydrate and amino acid metabolism (<i<p</i< < 0.05). In addition, the top 10 abundance of microbiota were more or less significantly associated with the two phenotypes (<i<p</i< < 0.05). Collectively, these findings provide probable explanations for the importance of BF in neonates and support a theoretical basis for feeding regimes in indigenous Chinese piglets.
abstractGer	It is well accepted that the gut microbiota of breast-fed (BF) and formula-fed (FF) infants are significantly different. However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The present study identified the differences in gut microbiota composition between BF- and FF-weaned Rongchang piglets at 30 days old, using pair-end sequencing on the Illumina HiSeq 2500 platform. The BF piglets had lower microbiota diversities than FF piglets (<i<p</i< < 0.05), and the community structures were well clustered as a result of each feeding pattern. Firmicutes and Bacteroidetes represented the most dominant phyla, and <i<Ruminococcus</i<, <i<Prevotella</i<, and <i<Gemmiger</i< were prominent genera in all piglets. <i<Ruminococcus</i<, <i<Prevotella</i<, <i<Oscillospira</i<, <i<Eubacterium</i<, <i<Gemmiger</i<, <i<Dorea</i<, and <i<Lactobacillus</i< populations were significantly higher, while <i<Treponema</i< and <i<Coprococcus</i< were significantly lower in BF piglets compared to FF piglets (<i<p</i< < 0.05). The metabolism pathways in the BF piglets were significantly different from FF piglets, which included carbohydrate and amino acid metabolism (<i<p</i< < 0.05). In addition, the top 10 abundance of microbiota were more or less significantly associated with the two phenotypes (<i<p</i< < 0.05). Collectively, these findings provide probable explanations for the importance of BF in neonates and support a theoretical basis for feeding regimes in indigenous Chinese piglets.
abstract_unstemmed	It is well accepted that the gut microbiota of breast-fed (BF) and formula-fed (FF) infants are significantly different. However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The present study identified the differences in gut microbiota composition between BF- and FF-weaned Rongchang piglets at 30 days old, using pair-end sequencing on the Illumina HiSeq 2500 platform. The BF piglets had lower microbiota diversities than FF piglets (<i<p</i< < 0.05), and the community structures were well clustered as a result of each feeding pattern. Firmicutes and Bacteroidetes represented the most dominant phyla, and <i<Ruminococcus</i<, <i<Prevotella</i<, and <i<Gemmiger</i< were prominent genera in all piglets. <i<Ruminococcus</i<, <i<Prevotella</i<, <i<Oscillospira</i<, <i<Eubacterium</i<, <i<Gemmiger</i<, <i<Dorea</i<, and <i<Lactobacillus</i< populations were significantly higher, while <i<Treponema</i< and <i<Coprococcus</i< were significantly lower in BF piglets compared to FF piglets (<i<p</i< < 0.05). The metabolism pathways in the BF piglets were significantly different from FF piglets, which included carbohydrate and amino acid metabolism (<i<p</i< < 0.05). In addition, the top 10 abundance of microbiota were more or less significantly associated with the two phenotypes (<i<p</i< < 0.05). Collectively, these findings provide probable explanations for the importance of BF in neonates and support a theoretical basis for feeding regimes in indigenous Chinese piglets.
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title_short	Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets
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However, there is still a limited number of studies comparing the gut microbiota of BF and FF piglets, despite increasing numbers of FF piglets in the modern pig industry. The present study identified the differences in gut microbiota composition between BF- and FF-weaned Rongchang piglets at 30 days old, using pair-end sequencing on the Illumina HiSeq 2500 platform. The BF piglets had lower microbiota diversities than FF piglets (<i<p</i< < 0.05), and the community structures were well clustered as a result of each feeding pattern. Firmicutes and Bacteroidetes represented the most dominant phyla, and <i<Ruminococcus</i<, <i<Prevotella</i<, and <i<Gemmiger</i< were prominent genera in all piglets. <i<Ruminococcus</i<, <i<Prevotella</i<, <i<Oscillospira</i<, <i<Eubacterium</i<, <i<Gemmiger</i<, <i<Dorea</i<, and <i<Lactobacillus</i< populations were significantly higher, while <i<Treponema</i< and <i<Coprococcus</i< were significantly lower in BF piglets compared to FF piglets (<i<p</i< < 0.05). The metabolism pathways in the BF piglets were significantly different from FF piglets, which included carbohydrate and amino acid metabolism (<i<p</i< < 0.05). In addition, the top 10 abundance of microbiota were more or less significantly associated with the two phenotypes (<i<p</i< < 0.05). 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Distinct Gut Microbiome Induced by Different Feeding Regimes in Weaned Piglets

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