Enhancing the Expression of the <i<OsF3H</i< Gene in <i<Oryza sativa</i< Leads to the Regulation of Multiple Biosynthetic Pathways and Transcriptomic Changes That Influence Insect Resistance
The white-backed planthopper (WBPH) is a major pest of rice crops and causes severe loss of yield. We previously developed the WBPH-resistant rice cultivar “<i<OxF3H</i<” by overexpressing the <i<OsF3H</i< gene. Although there was a higher accumulation of the flavonoids kaemp...
Ausführliche Beschreibung
Autor*in: |
Rahmatullah Jan [verfasserIn] Sajjad Asaf [verfasserIn] Lubna [verfasserIn] Saleem Asif [verfasserIn] Eun-Gyeong Kim [verfasserIn] Yoon-Hee Jang [verfasserIn] Nari Kim [verfasserIn] Ahmed Al-Harrasi [verfasserIn] Gang-Seob Lee [verfasserIn] Kyung-Min Kim [verfasserIn] |
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E-Artikel |
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Sprache: |
Englisch |
Erschienen: |
2022 |
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Übergeordnetes Werk: |
In: International Journal of Molecular Sciences - MDPI AG, 2003, 23(2022), 23, p 15308 |
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Übergeordnetes Werk: |
volume:23 ; year:2022 ; number:23, p 15308 |
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Link aufrufen |
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DOI / URN: |
10.3390/ijms232315308 |
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Katalog-ID: |
DOAJ085619191 |
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520 | |a The white-backed planthopper (WBPH) is a major pest of rice crops and causes severe loss of yield. We previously developed the WBPH-resistant rice cultivar “<i<OxF3H</i<” by overexpressing the <i<OsF3H</i< gene. Although there was a higher accumulation of the flavonoids kaempferol (Kr) and quercetin (Qu) as well as salicylic acid (SA) in <i<OxF3H</i< transgenic (<i<OsF3H</i< or Trans) plants compared to the wild type (WT), it is still unclear how Os<i<F3H</i< overexpression affects these WBPH resistant-related changes in gene expression in <i<OxF3H</i< plants. In this study, we analyze RNA-seq data from <i<OxF3H</i< and WT at several points (0 h, 3 h, 12 h, and 24 h) after WBPH infection to explain how overall changes in gene expression happen in these two cultivars. RT-qPCR further validated a number of the genes. Results revealed that the highest number of DEGs (4735) between the two genotypes was detected after 24 h of infection. Interestingly, it was found that several of the DEGs between the WT and <i<OsF3H</i< under control conditions were also differentially expressed in <i<OsF3H</i< in response to WBPH infestation. These results indicate that significant differences in gene expression between the “<i<OxF3H</i<” and “WT” exist as the infection time increases. Many of these DEGs were related to oxidoreductase activity, response to stress, salicylic acid biosynthesis, metabolic process, defense response to pathogen, cellular response to toxic substance, and regulation of hormone levels. Moreover, genes involved in salicylic acid (SA) and ethylene (Et) biosynthesis were upregulated in <i<OxF3H</i< plants, while jasmonic acid (JA), brassinosteroid (Br), and abscisic acid (ABA) signaling pathways were found downregulated in <i<OxF3H</i< plants during WBPH infestation. Interestingly, many DEGs related to pathogenesis, such as <i<OsPR1</i<, <i<OsPR1b</i<, <i<OsNPR1</i<, <i<OsNPR3,</i< and <i<OsNPR5,</i< were found to be significantly upregulated in <i<OxF3H</i< plants. Additionally, genes related to the MAPKs pathway and about 30 <i<WRKY</i< genes involved in different pathways were upregulated in <i<OxF3H</i< plants after WBPH infestation. This suggests that overexpression of the <i<OxF3H</i< gene leads to multiple transcriptomic changes and impacts plant hormones and pathogenic-related and secondary-metabolites-related genes, enhancing the plant’s resistance to WBPH infestation. | ||
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700 | 0 | |a Gang-Seob Lee |e verfasserin |4 aut | |
700 | 0 | |a Kyung-Min Kim |e verfasserin |4 aut | |
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10.3390/ijms232315308 doi (DE-627)DOAJ085619191 (DE-599)DOAJ2dedc68170fa40e0bfff23c8f7c8272d DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Rahmatullah Jan verfasserin aut Enhancing the Expression of the <i<OsF3H</i< Gene in <i<Oryza sativa</i< Leads to the Regulation of Multiple Biosynthetic Pathways and Transcriptomic Changes That Influence Insect Resistance 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The white-backed planthopper (WBPH) is a major pest of rice crops and causes severe loss of yield. We previously developed the WBPH-resistant rice cultivar “<i<OxF3H</i<” by overexpressing the <i<OsF3H</i< gene. Although there was a higher accumulation of the flavonoids kaempferol (Kr) and quercetin (Qu) as well as salicylic acid (SA) in <i<OxF3H</i< transgenic (<i<OsF3H</i< or Trans) plants compared to the wild type (WT), it is still unclear how Os<i<F3H</i< overexpression affects these WBPH resistant-related changes in gene expression in <i<OxF3H</i< plants. In this study, we analyze RNA-seq data from <i<OxF3H</i< and WT at several points (0 h, 3 h, 12 h, and 24 h) after WBPH infection to explain how overall changes in gene expression happen in these two cultivars. RT-qPCR further validated a number of the genes. Results revealed that the highest number of DEGs (4735) between the two genotypes was detected after 24 h of infection. Interestingly, it was found that several of the DEGs between the WT and <i<OsF3H</i< under control conditions were also differentially expressed in <i<OsF3H</i< in response to WBPH infestation. These results indicate that significant differences in gene expression between the “<i<OxF3H</i<” and “WT” exist as the infection time increases. Many of these DEGs were related to oxidoreductase activity, response to stress, salicylic acid biosynthesis, metabolic process, defense response to pathogen, cellular response to toxic substance, and regulation of hormone levels. Moreover, genes involved in salicylic acid (SA) and ethylene (Et) biosynthesis were upregulated in <i<OxF3H</i< plants, while jasmonic acid (JA), brassinosteroid (Br), and abscisic acid (ABA) signaling pathways were found downregulated in <i<OxF3H</i< plants during WBPH infestation. Interestingly, many DEGs related to pathogenesis, such as <i<OsPR1</i<, <i<OsPR1b</i<, <i<OsNPR1</i<, <i<OsNPR3,</i< and <i<OsNPR5,</i< were found to be significantly upregulated in <i<OxF3H</i< plants. Additionally, genes related to the MAPKs pathway and about 30 <i<WRKY</i< genes involved in different pathways were upregulated in <i<OxF3H</i< plants after WBPH infestation. This suggests that overexpression of the <i<OxF3H</i< gene leads to multiple transcriptomic changes and impacts plant hormones and pathogenic-related and secondary-metabolites-related genes, enhancing the plant’s resistance to WBPH infestation. <i<Oryza sativa</i< pathogen defense system salicylic acid jasmonic acid transcriptomics Biology (General) Chemistry Sajjad Asaf verfasserin aut Lubna verfasserin aut Saleem Asif verfasserin aut Eun-Gyeong Kim verfasserin aut Yoon-Hee Jang verfasserin aut Nari Kim verfasserin aut Ahmed Al-Harrasi verfasserin aut Gang-Seob Lee verfasserin aut Kyung-Min Kim verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 23(2022), 23, p 15308 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:23 year:2022 number:23, p 15308 https://doi.org/10.3390/ijms232315308 kostenfrei https://doaj.org/article/2dedc68170fa40e0bfff23c8f7c8272d kostenfrei https://www.mdpi.com/1422-0067/23/23/15308 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 23 2022 23, p 15308 |
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10.3390/ijms232315308 doi (DE-627)DOAJ085619191 (DE-599)DOAJ2dedc68170fa40e0bfff23c8f7c8272d DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Rahmatullah Jan verfasserin aut Enhancing the Expression of the <i<OsF3H</i< Gene in <i<Oryza sativa</i< Leads to the Regulation of Multiple Biosynthetic Pathways and Transcriptomic Changes That Influence Insect Resistance 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The white-backed planthopper (WBPH) is a major pest of rice crops and causes severe loss of yield. We previously developed the WBPH-resistant rice cultivar “<i<OxF3H</i<” by overexpressing the <i<OsF3H</i< gene. Although there was a higher accumulation of the flavonoids kaempferol (Kr) and quercetin (Qu) as well as salicylic acid (SA) in <i<OxF3H</i< transgenic (<i<OsF3H</i< or Trans) plants compared to the wild type (WT), it is still unclear how Os<i<F3H</i< overexpression affects these WBPH resistant-related changes in gene expression in <i<OxF3H</i< plants. In this study, we analyze RNA-seq data from <i<OxF3H</i< and WT at several points (0 h, 3 h, 12 h, and 24 h) after WBPH infection to explain how overall changes in gene expression happen in these two cultivars. RT-qPCR further validated a number of the genes. Results revealed that the highest number of DEGs (4735) between the two genotypes was detected after 24 h of infection. Interestingly, it was found that several of the DEGs between the WT and <i<OsF3H</i< under control conditions were also differentially expressed in <i<OsF3H</i< in response to WBPH infestation. These results indicate that significant differences in gene expression between the “<i<OxF3H</i<” and “WT” exist as the infection time increases. Many of these DEGs were related to oxidoreductase activity, response to stress, salicylic acid biosynthesis, metabolic process, defense response to pathogen, cellular response to toxic substance, and regulation of hormone levels. Moreover, genes involved in salicylic acid (SA) and ethylene (Et) biosynthesis were upregulated in <i<OxF3H</i< plants, while jasmonic acid (JA), brassinosteroid (Br), and abscisic acid (ABA) signaling pathways were found downregulated in <i<OxF3H</i< plants during WBPH infestation. Interestingly, many DEGs related to pathogenesis, such as <i<OsPR1</i<, <i<OsPR1b</i<, <i<OsNPR1</i<, <i<OsNPR3,</i< and <i<OsNPR5,</i< were found to be significantly upregulated in <i<OxF3H</i< plants. Additionally, genes related to the MAPKs pathway and about 30 <i<WRKY</i< genes involved in different pathways were upregulated in <i<OxF3H</i< plants after WBPH infestation. This suggests that overexpression of the <i<OxF3H</i< gene leads to multiple transcriptomic changes and impacts plant hormones and pathogenic-related and secondary-metabolites-related genes, enhancing the plant’s resistance to WBPH infestation. <i<Oryza sativa</i< pathogen defense system salicylic acid jasmonic acid transcriptomics Biology (General) Chemistry Sajjad Asaf verfasserin aut Lubna verfasserin aut Saleem Asif verfasserin aut Eun-Gyeong Kim verfasserin aut Yoon-Hee Jang verfasserin aut Nari Kim verfasserin aut Ahmed Al-Harrasi verfasserin aut Gang-Seob Lee verfasserin aut Kyung-Min Kim verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 23(2022), 23, p 15308 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:23 year:2022 number:23, p 15308 https://doi.org/10.3390/ijms232315308 kostenfrei https://doaj.org/article/2dedc68170fa40e0bfff23c8f7c8272d kostenfrei https://www.mdpi.com/1422-0067/23/23/15308 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 23 2022 23, p 15308 |
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10.3390/ijms232315308 doi (DE-627)DOAJ085619191 (DE-599)DOAJ2dedc68170fa40e0bfff23c8f7c8272d DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Rahmatullah Jan verfasserin aut Enhancing the Expression of the <i<OsF3H</i< Gene in <i<Oryza sativa</i< Leads to the Regulation of Multiple Biosynthetic Pathways and Transcriptomic Changes That Influence Insect Resistance 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The white-backed planthopper (WBPH) is a major pest of rice crops and causes severe loss of yield. We previously developed the WBPH-resistant rice cultivar “<i<OxF3H</i<” by overexpressing the <i<OsF3H</i< gene. Although there was a higher accumulation of the flavonoids kaempferol (Kr) and quercetin (Qu) as well as salicylic acid (SA) in <i<OxF3H</i< transgenic (<i<OsF3H</i< or Trans) plants compared to the wild type (WT), it is still unclear how Os<i<F3H</i< overexpression affects these WBPH resistant-related changes in gene expression in <i<OxF3H</i< plants. In this study, we analyze RNA-seq data from <i<OxF3H</i< and WT at several points (0 h, 3 h, 12 h, and 24 h) after WBPH infection to explain how overall changes in gene expression happen in these two cultivars. RT-qPCR further validated a number of the genes. Results revealed that the highest number of DEGs (4735) between the two genotypes was detected after 24 h of infection. Interestingly, it was found that several of the DEGs between the WT and <i<OsF3H</i< under control conditions were also differentially expressed in <i<OsF3H</i< in response to WBPH infestation. These results indicate that significant differences in gene expression between the “<i<OxF3H</i<” and “WT” exist as the infection time increases. Many of these DEGs were related to oxidoreductase activity, response to stress, salicylic acid biosynthesis, metabolic process, defense response to pathogen, cellular response to toxic substance, and regulation of hormone levels. Moreover, genes involved in salicylic acid (SA) and ethylene (Et) biosynthesis were upregulated in <i<OxF3H</i< plants, while jasmonic acid (JA), brassinosteroid (Br), and abscisic acid (ABA) signaling pathways were found downregulated in <i<OxF3H</i< plants during WBPH infestation. Interestingly, many DEGs related to pathogenesis, such as <i<OsPR1</i<, <i<OsPR1b</i<, <i<OsNPR1</i<, <i<OsNPR3,</i< and <i<OsNPR5,</i< were found to be significantly upregulated in <i<OxF3H</i< plants. Additionally, genes related to the MAPKs pathway and about 30 <i<WRKY</i< genes involved in different pathways were upregulated in <i<OxF3H</i< plants after WBPH infestation. This suggests that overexpression of the <i<OxF3H</i< gene leads to multiple transcriptomic changes and impacts plant hormones and pathogenic-related and secondary-metabolites-related genes, enhancing the plant’s resistance to WBPH infestation. <i<Oryza sativa</i< pathogen defense system salicylic acid jasmonic acid transcriptomics Biology (General) Chemistry Sajjad Asaf verfasserin aut Lubna verfasserin aut Saleem Asif verfasserin aut Eun-Gyeong Kim verfasserin aut Yoon-Hee Jang verfasserin aut Nari Kim verfasserin aut Ahmed Al-Harrasi verfasserin aut Gang-Seob Lee verfasserin aut Kyung-Min Kim verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 23(2022), 23, p 15308 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:23 year:2022 number:23, p 15308 https://doi.org/10.3390/ijms232315308 kostenfrei https://doaj.org/article/2dedc68170fa40e0bfff23c8f7c8272d kostenfrei https://www.mdpi.com/1422-0067/23/23/15308 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 23 2022 23, p 15308 |
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Rahmatullah Jan misc QH301-705.5 misc QD1-999 misc <i<Oryza sativa</i< misc pathogen misc defense system misc salicylic acid misc jasmonic acid misc transcriptomics misc Biology (General) misc Chemistry Enhancing the Expression of the <i<OsF3H</i< Gene in <i<Oryza sativa</i< Leads to the Regulation of Multiple Biosynthetic Pathways and Transcriptomic Changes That Influence Insect Resistance |
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QH301-705.5 QD1-999 Enhancing the Expression of the <i<OsF3H</i< Gene in <i<Oryza sativa</i< Leads to the Regulation of Multiple Biosynthetic Pathways and Transcriptomic Changes That Influence Insect Resistance <i<Oryza sativa</i< pathogen defense system salicylic acid jasmonic acid transcriptomics |
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enhancing the expression of the <i<osf3h</i< gene in <i<oryza sativa</i< leads to the regulation of multiple biosynthetic pathways and transcriptomic changes that influence insect resistance |
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Enhancing the Expression of the <i<OsF3H</i< Gene in <i<Oryza sativa</i< Leads to the Regulation of Multiple Biosynthetic Pathways and Transcriptomic Changes That Influence Insect Resistance |
abstract |
The white-backed planthopper (WBPH) is a major pest of rice crops and causes severe loss of yield. We previously developed the WBPH-resistant rice cultivar “<i<OxF3H</i<” by overexpressing the <i<OsF3H</i< gene. Although there was a higher accumulation of the flavonoids kaempferol (Kr) and quercetin (Qu) as well as salicylic acid (SA) in <i<OxF3H</i< transgenic (<i<OsF3H</i< or Trans) plants compared to the wild type (WT), it is still unclear how Os<i<F3H</i< overexpression affects these WBPH resistant-related changes in gene expression in <i<OxF3H</i< plants. In this study, we analyze RNA-seq data from <i<OxF3H</i< and WT at several points (0 h, 3 h, 12 h, and 24 h) after WBPH infection to explain how overall changes in gene expression happen in these two cultivars. RT-qPCR further validated a number of the genes. Results revealed that the highest number of DEGs (4735) between the two genotypes was detected after 24 h of infection. Interestingly, it was found that several of the DEGs between the WT and <i<OsF3H</i< under control conditions were also differentially expressed in <i<OsF3H</i< in response to WBPH infestation. These results indicate that significant differences in gene expression between the “<i<OxF3H</i<” and “WT” exist as the infection time increases. Many of these DEGs were related to oxidoreductase activity, response to stress, salicylic acid biosynthesis, metabolic process, defense response to pathogen, cellular response to toxic substance, and regulation of hormone levels. Moreover, genes involved in salicylic acid (SA) and ethylene (Et) biosynthesis were upregulated in <i<OxF3H</i< plants, while jasmonic acid (JA), brassinosteroid (Br), and abscisic acid (ABA) signaling pathways were found downregulated in <i<OxF3H</i< plants during WBPH infestation. Interestingly, many DEGs related to pathogenesis, such as <i<OsPR1</i<, <i<OsPR1b</i<, <i<OsNPR1</i<, <i<OsNPR3,</i< and <i<OsNPR5,</i< were found to be significantly upregulated in <i<OxF3H</i< plants. Additionally, genes related to the MAPKs pathway and about 30 <i<WRKY</i< genes involved in different pathways were upregulated in <i<OxF3H</i< plants after WBPH infestation. This suggests that overexpression of the <i<OxF3H</i< gene leads to multiple transcriptomic changes and impacts plant hormones and pathogenic-related and secondary-metabolites-related genes, enhancing the plant’s resistance to WBPH infestation. |
abstractGer |
The white-backed planthopper (WBPH) is a major pest of rice crops and causes severe loss of yield. We previously developed the WBPH-resistant rice cultivar “<i<OxF3H</i<” by overexpressing the <i<OsF3H</i< gene. Although there was a higher accumulation of the flavonoids kaempferol (Kr) and quercetin (Qu) as well as salicylic acid (SA) in <i<OxF3H</i< transgenic (<i<OsF3H</i< or Trans) plants compared to the wild type (WT), it is still unclear how Os<i<F3H</i< overexpression affects these WBPH resistant-related changes in gene expression in <i<OxF3H</i< plants. In this study, we analyze RNA-seq data from <i<OxF3H</i< and WT at several points (0 h, 3 h, 12 h, and 24 h) after WBPH infection to explain how overall changes in gene expression happen in these two cultivars. RT-qPCR further validated a number of the genes. Results revealed that the highest number of DEGs (4735) between the two genotypes was detected after 24 h of infection. Interestingly, it was found that several of the DEGs between the WT and <i<OsF3H</i< under control conditions were also differentially expressed in <i<OsF3H</i< in response to WBPH infestation. These results indicate that significant differences in gene expression between the “<i<OxF3H</i<” and “WT” exist as the infection time increases. Many of these DEGs were related to oxidoreductase activity, response to stress, salicylic acid biosynthesis, metabolic process, defense response to pathogen, cellular response to toxic substance, and regulation of hormone levels. Moreover, genes involved in salicylic acid (SA) and ethylene (Et) biosynthesis were upregulated in <i<OxF3H</i< plants, while jasmonic acid (JA), brassinosteroid (Br), and abscisic acid (ABA) signaling pathways were found downregulated in <i<OxF3H</i< plants during WBPH infestation. Interestingly, many DEGs related to pathogenesis, such as <i<OsPR1</i<, <i<OsPR1b</i<, <i<OsNPR1</i<, <i<OsNPR3,</i< and <i<OsNPR5,</i< were found to be significantly upregulated in <i<OxF3H</i< plants. Additionally, genes related to the MAPKs pathway and about 30 <i<WRKY</i< genes involved in different pathways were upregulated in <i<OxF3H</i< plants after WBPH infestation. This suggests that overexpression of the <i<OxF3H</i< gene leads to multiple transcriptomic changes and impacts plant hormones and pathogenic-related and secondary-metabolites-related genes, enhancing the plant’s resistance to WBPH infestation. |
abstract_unstemmed |
The white-backed planthopper (WBPH) is a major pest of rice crops and causes severe loss of yield. We previously developed the WBPH-resistant rice cultivar “<i<OxF3H</i<” by overexpressing the <i<OsF3H</i< gene. Although there was a higher accumulation of the flavonoids kaempferol (Kr) and quercetin (Qu) as well as salicylic acid (SA) in <i<OxF3H</i< transgenic (<i<OsF3H</i< or Trans) plants compared to the wild type (WT), it is still unclear how Os<i<F3H</i< overexpression affects these WBPH resistant-related changes in gene expression in <i<OxF3H</i< plants. In this study, we analyze RNA-seq data from <i<OxF3H</i< and WT at several points (0 h, 3 h, 12 h, and 24 h) after WBPH infection to explain how overall changes in gene expression happen in these two cultivars. RT-qPCR further validated a number of the genes. Results revealed that the highest number of DEGs (4735) between the two genotypes was detected after 24 h of infection. Interestingly, it was found that several of the DEGs between the WT and <i<OsF3H</i< under control conditions were also differentially expressed in <i<OsF3H</i< in response to WBPH infestation. These results indicate that significant differences in gene expression between the “<i<OxF3H</i<” and “WT” exist as the infection time increases. Many of these DEGs were related to oxidoreductase activity, response to stress, salicylic acid biosynthesis, metabolic process, defense response to pathogen, cellular response to toxic substance, and regulation of hormone levels. Moreover, genes involved in salicylic acid (SA) and ethylene (Et) biosynthesis were upregulated in <i<OxF3H</i< plants, while jasmonic acid (JA), brassinosteroid (Br), and abscisic acid (ABA) signaling pathways were found downregulated in <i<OxF3H</i< plants during WBPH infestation. Interestingly, many DEGs related to pathogenesis, such as <i<OsPR1</i<, <i<OsPR1b</i<, <i<OsNPR1</i<, <i<OsNPR3,</i< and <i<OsNPR5,</i< were found to be significantly upregulated in <i<OxF3H</i< plants. Additionally, genes related to the MAPKs pathway and about 30 <i<WRKY</i< genes involved in different pathways were upregulated in <i<OxF3H</i< plants after WBPH infestation. This suggests that overexpression of the <i<OxF3H</i< gene leads to multiple transcriptomic changes and impacts plant hormones and pathogenic-related and secondary-metabolites-related genes, enhancing the plant’s resistance to WBPH infestation. |
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Enhancing the Expression of the <i<OsF3H</i< Gene in <i<Oryza sativa</i< Leads to the Regulation of Multiple Biosynthetic Pathways and Transcriptomic Changes That Influence Insect Resistance |
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Interestingly, it was found that several of the DEGs between the WT and <i<OsF3H</i< under control conditions were also differentially expressed in <i<OsF3H</i< in response to WBPH infestation. These results indicate that significant differences in gene expression between the “<i<OxF3H</i<” and “WT” exist as the infection time increases. Many of these DEGs were related to oxidoreductase activity, response to stress, salicylic acid biosynthesis, metabolic process, defense response to pathogen, cellular response to toxic substance, and regulation of hormone levels. Moreover, genes involved in salicylic acid (SA) and ethylene (Et) biosynthesis were upregulated in <i<OxF3H</i< plants, while jasmonic acid (JA), brassinosteroid (Br), and abscisic acid (ABA) signaling pathways were found downregulated in <i<OxF3H</i< plants during WBPH infestation. 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