Transcriptome analysis of Clematis lanuginosa: Novel features of the molecular events occurring under heat-shock stress

The weak heat tolerance of Clematis ornamental varieties negatively affects their ornamental qualities in the summer. To elucidate heat resistance mechanisms, Clematis lanuginosa, which is an important original parent of the Clematis large-flowered group of ornamental varieties, was selected for use...
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Autor*in:	Linfang Li [verfasserIn] Shuan Wang [verfasserIn] Qiao Li [verfasserIn] Linghe Sun [verfasserIn] Xin Han [verfasserIn] Lulu Gao [verfasserIn] Peng Wang [verfasserIn] Fenni Lv [verfasserIn] Rutong Yang [verfasserIn] Ya Li [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2022

Schlagwörter:	clematis lanuginosa. transcriptome rna-seq heat shock gene expression

Übergeordnetes Werk:	In: Ornamental Plant Research - Maximum Academic Press, 2024, 2(2022), 1, Seite 9
Übergeordnetes Werk:	volume:2 ; year:2022 ; number:1 ; pages:9

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.48130/OPR-2022-0018

Katalog-ID:	DOAJ091695546

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520			\|a The weak heat tolerance of Clematis ornamental varieties negatively affects their ornamental qualities in the summer. To elucidate heat resistance mechanisms, Clematis lanuginosa, which is an important original parent of the Clematis large-flowered group of ornamental varieties, was selected for use in this study. Here, six libraries, including three biological replicates each of control and heat-shock stress samples, were determined using RNA-sequencing technology. In total, 62,050 unigenes were obtained, and 6,439 unigenes exceeded 1 kb in length. A total of 42,377 unigenes were annotated using six databases. Between the two treatments, 2,165 differentially expressed genes were identified, with 1,565 being up-regulated and 600 down-regulated. In addition, 51 heat-shock protein-encoding genes were identified, among which the small heat-shock proteins accounted for 68.63%. In total, two heat-shock factors and 12 ribosomal proteins were significantly up-regulated under heat-stress conditions. The differential expressions of ethylene-responsive transcription factor, chalcone synthase, cysteine-rich receptor-like kinase and aspartic protease unigenes in guard cells were induced by heat-shock. The data obtained will assist the elucidation of the molecular events underlying heat-stress responses in C. lanuginosa.
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allfields	10.48130/OPR-2022-0018 doi (DE-627)DOAJ091695546 (DE-599)DOAJ3d9ac59e0a0d493696201f43ff9944b6 DE-627 ger DE-627 rakwb eng QK900-989 TD194-195 Linfang Li verfasserin aut Transcriptome analysis of Clematis lanuginosa: Novel features of the molecular events occurring under heat-shock stress 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The weak heat tolerance of Clematis ornamental varieties negatively affects their ornamental qualities in the summer. To elucidate heat resistance mechanisms, Clematis lanuginosa, which is an important original parent of the Clematis large-flowered group of ornamental varieties, was selected for use in this study. Here, six libraries, including three biological replicates each of control and heat-shock stress samples, were determined using RNA-sequencing technology. In total, 62,050 unigenes were obtained, and 6,439 unigenes exceeded 1 kb in length. A total of 42,377 unigenes were annotated using six databases. Between the two treatments, 2,165 differentially expressed genes were identified, with 1,565 being up-regulated and 600 down-regulated. In addition, 51 heat-shock protein-encoding genes were identified, among which the small heat-shock proteins accounted for 68.63%. In total, two heat-shock factors and 12 ribosomal proteins were significantly up-regulated under heat-stress conditions. The differential expressions of ethylene-responsive transcription factor, chalcone synthase, cysteine-rich receptor-like kinase and aspartic protease unigenes in guard cells were induced by heat-shock. The data obtained will assist the elucidation of the molecular events underlying heat-stress responses in C. lanuginosa. clematis lanuginosa. transcriptome rna-seq heat shock gene expression Plant ecology Environmental effects of industries and plants Shuan Wang verfasserin aut Qiao Li verfasserin aut Linghe Sun verfasserin aut Xin Han verfasserin aut Lulu Gao verfasserin aut Peng Wang verfasserin aut Fenni Lv verfasserin aut Rutong Yang verfasserin aut Ya Li verfasserin aut In Ornamental Plant Research Maximum Academic Press, 2024 2(2022), 1, Seite 9 (DE-627)1882454766 (DE-600)3180766-5 27692094 nnns volume:2 year:2022 number:1 pages:9 https://doi.org/10.48130/OPR-2022-0018 kostenfrei https://doaj.org/article/3d9ac59e0a0d493696201f43ff9944b6 kostenfrei https://www.maxapress.com/article/doi/10.48130/OPR-2022-0018 kostenfrei https://doaj.org/toc/2769-2094 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 2 2022 1 9
spelling	10.48130/OPR-2022-0018 doi (DE-627)DOAJ091695546 (DE-599)DOAJ3d9ac59e0a0d493696201f43ff9944b6 DE-627 ger DE-627 rakwb eng QK900-989 TD194-195 Linfang Li verfasserin aut Transcriptome analysis of Clematis lanuginosa: Novel features of the molecular events occurring under heat-shock stress 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier The weak heat tolerance of Clematis ornamental varieties negatively affects their ornamental qualities in the summer. To elucidate heat resistance mechanisms, Clematis lanuginosa, which is an important original parent of the Clematis large-flowered group of ornamental varieties, was selected for use in this study. Here, six libraries, including three biological replicates each of control and heat-shock stress samples, were determined using RNA-sequencing technology. In total, 62,050 unigenes were obtained, and 6,439 unigenes exceeded 1 kb in length. A total of 42,377 unigenes were annotated using six databases. Between the two treatments, 2,165 differentially expressed genes were identified, with 1,565 being up-regulated and 600 down-regulated. In addition, 51 heat-shock protein-encoding genes were identified, among which the small heat-shock proteins accounted for 68.63%. In total, two heat-shock factors and 12 ribosomal proteins were significantly up-regulated under heat-stress conditions. The differential expressions of ethylene-responsive transcription factor, chalcone synthase, cysteine-rich receptor-like kinase and aspartic protease unigenes in guard cells were induced by heat-shock. The data obtained will assist the elucidation of the molecular events underlying heat-stress responses in C. lanuginosa. clematis lanuginosa. transcriptome rna-seq heat shock gene expression Plant ecology Environmental effects of industries and plants Shuan Wang verfasserin aut Qiao Li verfasserin aut Linghe Sun verfasserin aut Xin Han verfasserin aut Lulu Gao verfasserin aut Peng Wang verfasserin aut Fenni Lv verfasserin aut Rutong Yang verfasserin aut Ya Li verfasserin aut In Ornamental Plant Research Maximum Academic Press, 2024 2(2022), 1, Seite 9 (DE-627)1882454766 (DE-600)3180766-5 27692094 nnns volume:2 year:2022 number:1 pages:9 https://doi.org/10.48130/OPR-2022-0018 kostenfrei https://doaj.org/article/3d9ac59e0a0d493696201f43ff9944b6 kostenfrei https://www.maxapress.com/article/doi/10.48130/OPR-2022-0018 kostenfrei https://doaj.org/toc/2769-2094 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 2 2022 1 9
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callnumber-first	Q - Science
author	Linfang Li
spellingShingle	Linfang Li misc QK900-989 misc TD194-195 misc clematis lanuginosa. misc transcriptome rna-seq misc heat shock misc gene expression misc Plant ecology misc Environmental effects of industries and plants Transcriptome analysis of Clematis lanuginosa: Novel features of the molecular events occurring under heat-shock stress
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topic_title	QK900-989 TD194-195 Transcriptome analysis of Clematis lanuginosa: Novel features of the molecular events occurring under heat-shock stress clematis lanuginosa transcriptome rna-seq heat shock gene expression
topic	misc QK900-989 misc TD194-195 misc clematis lanuginosa. misc transcriptome rna-seq misc heat shock misc gene expression misc Plant ecology misc Environmental effects of industries and plants
topic_unstemmed	misc QK900-989 misc TD194-195 misc clematis lanuginosa. misc transcriptome rna-seq misc heat shock misc gene expression misc Plant ecology misc Environmental effects of industries and plants
topic_browse	misc QK900-989 misc TD194-195 misc clematis lanuginosa. misc transcriptome rna-seq misc heat shock misc gene expression misc Plant ecology misc Environmental effects of industries and plants
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title	Transcriptome analysis of Clematis lanuginosa: Novel features of the molecular events occurring under heat-shock stress
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title_full	Transcriptome analysis of Clematis lanuginosa: Novel features of the molecular events occurring under heat-shock stress
author_sort	Linfang Li
journal	Ornamental Plant Research
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title_sort	transcriptome analysis of clematis lanuginosa: novel features of the molecular events occurring under heat-shock stress
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title_auth	Transcriptome analysis of Clematis lanuginosa: Novel features of the molecular events occurring under heat-shock stress
abstract	The weak heat tolerance of Clematis ornamental varieties negatively affects their ornamental qualities in the summer. To elucidate heat resistance mechanisms, Clematis lanuginosa, which is an important original parent of the Clematis large-flowered group of ornamental varieties, was selected for use in this study. Here, six libraries, including three biological replicates each of control and heat-shock stress samples, were determined using RNA-sequencing technology. In total, 62,050 unigenes were obtained, and 6,439 unigenes exceeded 1 kb in length. A total of 42,377 unigenes were annotated using six databases. Between the two treatments, 2,165 differentially expressed genes were identified, with 1,565 being up-regulated and 600 down-regulated. In addition, 51 heat-shock protein-encoding genes were identified, among which the small heat-shock proteins accounted for 68.63%. In total, two heat-shock factors and 12 ribosomal proteins were significantly up-regulated under heat-stress conditions. The differential expressions of ethylene-responsive transcription factor, chalcone synthase, cysteine-rich receptor-like kinase and aspartic protease unigenes in guard cells were induced by heat-shock. The data obtained will assist the elucidation of the molecular events underlying heat-stress responses in C. lanuginosa.
abstractGer	The weak heat tolerance of Clematis ornamental varieties negatively affects their ornamental qualities in the summer. To elucidate heat resistance mechanisms, Clematis lanuginosa, which is an important original parent of the Clematis large-flowered group of ornamental varieties, was selected for use in this study. Here, six libraries, including three biological replicates each of control and heat-shock stress samples, were determined using RNA-sequencing technology. In total, 62,050 unigenes were obtained, and 6,439 unigenes exceeded 1 kb in length. A total of 42,377 unigenes were annotated using six databases. Between the two treatments, 2,165 differentially expressed genes were identified, with 1,565 being up-regulated and 600 down-regulated. In addition, 51 heat-shock protein-encoding genes were identified, among which the small heat-shock proteins accounted for 68.63%. In total, two heat-shock factors and 12 ribosomal proteins were significantly up-regulated under heat-stress conditions. The differential expressions of ethylene-responsive transcription factor, chalcone synthase, cysteine-rich receptor-like kinase and aspartic protease unigenes in guard cells were induced by heat-shock. The data obtained will assist the elucidation of the molecular events underlying heat-stress responses in C. lanuginosa.
abstract_unstemmed	The weak heat tolerance of Clematis ornamental varieties negatively affects their ornamental qualities in the summer. To elucidate heat resistance mechanisms, Clematis lanuginosa, which is an important original parent of the Clematis large-flowered group of ornamental varieties, was selected for use in this study. Here, six libraries, including three biological replicates each of control and heat-shock stress samples, were determined using RNA-sequencing technology. In total, 62,050 unigenes were obtained, and 6,439 unigenes exceeded 1 kb in length. A total of 42,377 unigenes were annotated using six databases. Between the two treatments, 2,165 differentially expressed genes were identified, with 1,565 being up-regulated and 600 down-regulated. In addition, 51 heat-shock protein-encoding genes were identified, among which the small heat-shock proteins accounted for 68.63%. In total, two heat-shock factors and 12 ribosomal proteins were significantly up-regulated under heat-stress conditions. The differential expressions of ethylene-responsive transcription factor, chalcone synthase, cysteine-rich receptor-like kinase and aspartic protease unigenes in guard cells were induced by heat-shock. The data obtained will assist the elucidation of the molecular events underlying heat-stress responses in C. lanuginosa.
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title_short	Transcriptome analysis of Clematis lanuginosa: Novel features of the molecular events occurring under heat-shock stress
url	https://doi.org/10.48130/OPR-2022-0018 https://doaj.org/article/3d9ac59e0a0d493696201f43ff9944b6 https://www.maxapress.com/article/doi/10.48130/OPR-2022-0018 https://doaj.org/toc/2769-2094
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up_date	2024-07-03T21:43:32.074Z
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Transcriptome analysis of Clematis lanuginosa: Novel features of the molecular events occurring under heat-shock stress

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