Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor

Flowering is an essential part of the productive process, and flowering time is determined by endogenous genetic components and many ambient factors. <i<SHORT VEGETATIVE PHASE</i< (<i<SVP</i<), a MADS-box transcription factor, regulates floral transition by repressing floral...
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Autor*in:	Dongli Wang [verfasserIn] Renwu Cheng [verfasserIn] Yunshan Liu [verfasserIn] Shengkun Wang [verfasserIn] Zhende Yang [verfasserIn] Sen Meng [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2023

Schlagwörter:	transcriptome analysis overexpression transcription factor

Übergeordnetes Werk:	In: Forests - MDPI AG, 2010, 14(2023), 1692, p 1692
Übergeordnetes Werk:	volume:14 ; year:2023 ; number:1692, p 1692

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3390/f14091692

Katalog-ID:	DOAJ093404263

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spelling	10.3390/f14091692 doi (DE-627)DOAJ093404263 (DE-599)DOAJ49206c3c051b4be9ad9748c3f6e325d8 DE-627 ger DE-627 rakwb eng QK900-989 Dongli Wang verfasserin aut Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Flowering is an essential part of the productive process, and flowering time is determined by endogenous genetic components and many ambient factors. <i<SHORT VEGETATIVE PHASE</i< (<i<SVP</i<), a MADS-box transcription factor, regulates floral transition by repressing floral integrator genes and is involved in ABA-mediated drought stress. In this study, we transformed the poplar (<i<Populus</i<) clone “84K” with the <i<SVP-Like</i< gene, while stable overexpression transgenic lines were obtained. Transcriptome analysis of the leaves of the transgenic lines and WT (Wide Type) poplars revealed that a total of 477 genes showed significantly altered expression, overexpressing <i<SVL</i< genes, including 342 upregulated and 135 downregulated genes. Ten subclusters in DEGs were analyzed, and KEGG terms of the largest subcluster were associated with two key pathways: hormone-related genes and glutathione metabolism. Meanwhile, many transcriptional factors were involved. Our results are helpful for in-depth analysis of the MADS transcriptional factor in poplars. This work provides the basis for studying woody plant growth, and development and molecular mechanisms responded to environmental stresses. <i<Populus</i< transcriptome analysis overexpression transcription factor Plant ecology Renwu Cheng verfasserin aut Yunshan Liu verfasserin aut Shengkun Wang verfasserin aut Zhende Yang verfasserin aut Sen Meng verfasserin aut In Forests MDPI AG, 2010 14(2023), 1692, p 1692 (DE-627)614095689 (DE-600)2527081-3 19994907 nnns volume:14 year:2023 number:1692, p 1692 https://doi.org/10.3390/f14091692 kostenfrei https://doaj.org/article/49206c3c051b4be9ad9748c3f6e325d8 kostenfrei https://www.mdpi.com/1999-4907/14/9/1692 kostenfrei https://doaj.org/toc/1999-4907 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023 1692, p 1692
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allfieldsGer	10.3390/f14091692 doi (DE-627)DOAJ093404263 (DE-599)DOAJ49206c3c051b4be9ad9748c3f6e325d8 DE-627 ger DE-627 rakwb eng QK900-989 Dongli Wang verfasserin aut Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Flowering is an essential part of the productive process, and flowering time is determined by endogenous genetic components and many ambient factors. <i<SHORT VEGETATIVE PHASE</i< (<i<SVP</i<), a MADS-box transcription factor, regulates floral transition by repressing floral integrator genes and is involved in ABA-mediated drought stress. In this study, we transformed the poplar (<i<Populus</i<) clone “84K” with the <i<SVP-Like</i< gene, while stable overexpression transgenic lines were obtained. Transcriptome analysis of the leaves of the transgenic lines and WT (Wide Type) poplars revealed that a total of 477 genes showed significantly altered expression, overexpressing <i<SVL</i< genes, including 342 upregulated and 135 downregulated genes. Ten subclusters in DEGs were analyzed, and KEGG terms of the largest subcluster were associated with two key pathways: hormone-related genes and glutathione metabolism. Meanwhile, many transcriptional factors were involved. Our results are helpful for in-depth analysis of the MADS transcriptional factor in poplars. This work provides the basis for studying woody plant growth, and development and molecular mechanisms responded to environmental stresses. <i<Populus</i< transcriptome analysis overexpression transcription factor Plant ecology Renwu Cheng verfasserin aut Yunshan Liu verfasserin aut Shengkun Wang verfasserin aut Zhende Yang verfasserin aut Sen Meng verfasserin aut In Forests MDPI AG, 2010 14(2023), 1692, p 1692 (DE-627)614095689 (DE-600)2527081-3 19994907 nnns volume:14 year:2023 number:1692, p 1692 https://doi.org/10.3390/f14091692 kostenfrei https://doaj.org/article/49206c3c051b4be9ad9748c3f6e325d8 kostenfrei https://www.mdpi.com/1999-4907/14/9/1692 kostenfrei https://doaj.org/toc/1999-4907 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023 1692, p 1692
allfieldsSound	10.3390/f14091692 doi (DE-627)DOAJ093404263 (DE-599)DOAJ49206c3c051b4be9ad9748c3f6e325d8 DE-627 ger DE-627 rakwb eng QK900-989 Dongli Wang verfasserin aut Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Flowering is an essential part of the productive process, and flowering time is determined by endogenous genetic components and many ambient factors. <i<SHORT VEGETATIVE PHASE</i< (<i<SVP</i<), a MADS-box transcription factor, regulates floral transition by repressing floral integrator genes and is involved in ABA-mediated drought stress. In this study, we transformed the poplar (<i<Populus</i<) clone “84K” with the <i<SVP-Like</i< gene, while stable overexpression transgenic lines were obtained. Transcriptome analysis of the leaves of the transgenic lines and WT (Wide Type) poplars revealed that a total of 477 genes showed significantly altered expression, overexpressing <i<SVL</i< genes, including 342 upregulated and 135 downregulated genes. Ten subclusters in DEGs were analyzed, and KEGG terms of the largest subcluster were associated with two key pathways: hormone-related genes and glutathione metabolism. Meanwhile, many transcriptional factors were involved. Our results are helpful for in-depth analysis of the MADS transcriptional factor in poplars. This work provides the basis for studying woody plant growth, and development and molecular mechanisms responded to environmental stresses. <i<Populus</i< transcriptome analysis overexpression transcription factor Plant ecology Renwu Cheng verfasserin aut Yunshan Liu verfasserin aut Shengkun Wang verfasserin aut Zhende Yang verfasserin aut Sen Meng verfasserin aut In Forests MDPI AG, 2010 14(2023), 1692, p 1692 (DE-627)614095689 (DE-600)2527081-3 19994907 nnns volume:14 year:2023 number:1692, p 1692 https://doi.org/10.3390/f14091692 kostenfrei https://doaj.org/article/49206c3c051b4be9ad9748c3f6e325d8 kostenfrei https://www.mdpi.com/1999-4907/14/9/1692 kostenfrei https://doaj.org/toc/1999-4907 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023 1692, p 1692
language	English
source	In Forests 14(2023), 1692, p 1692 volume:14 year:2023 number:1692, p 1692
sourceStr	In Forests 14(2023), 1692, p 1692 volume:14 year:2023 number:1692, p 1692
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	<i<Populus</i< transcriptome analysis overexpression transcription factor Plant ecology
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container_title	Forests
authorswithroles_txt_mv	Dongli Wang @@aut@@ Renwu Cheng @@aut@@ Yunshan Liu @@aut@@ Shengkun Wang @@aut@@ Zhende Yang @@aut@@ Sen Meng @@aut@@
publishDateDaySort_date	2023-01-01T00:00:00Z
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callnumber-first	Q - Science
author	Dongli Wang
spellingShingle	Dongli Wang misc QK900-989 misc <i<Populus</i< misc transcriptome analysis misc overexpression misc transcription factor misc Plant ecology Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor
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topic_title	QK900-989 Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor <i<Populus</i< transcriptome analysis overexpression transcription factor
topic	misc QK900-989 misc <i<Populus</i< misc transcriptome analysis misc overexpression misc transcription factor misc Plant ecology
topic_unstemmed	misc QK900-989 misc <i<Populus</i< misc transcriptome analysis misc overexpression misc transcription factor misc Plant ecology
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title	Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor
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title_full	Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor
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title_sort	transcriptome analysis of <i<populus</i< overexpression in <i<svl</i< transcription factor
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title_auth	Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor
abstract	Flowering is an essential part of the productive process, and flowering time is determined by endogenous genetic components and many ambient factors. <i<SHORT VEGETATIVE PHASE</i< (<i<SVP</i<), a MADS-box transcription factor, regulates floral transition by repressing floral integrator genes and is involved in ABA-mediated drought stress. In this study, we transformed the poplar (<i<Populus</i<) clone “84K” with the <i<SVP-Like</i< gene, while stable overexpression transgenic lines were obtained. Transcriptome analysis of the leaves of the transgenic lines and WT (Wide Type) poplars revealed that a total of 477 genes showed significantly altered expression, overexpressing <i<SVL</i< genes, including 342 upregulated and 135 downregulated genes. Ten subclusters in DEGs were analyzed, and KEGG terms of the largest subcluster were associated with two key pathways: hormone-related genes and glutathione metabolism. Meanwhile, many transcriptional factors were involved. Our results are helpful for in-depth analysis of the MADS transcriptional factor in poplars. This work provides the basis for studying woody plant growth, and development and molecular mechanisms responded to environmental stresses.
abstractGer	Flowering is an essential part of the productive process, and flowering time is determined by endogenous genetic components and many ambient factors. <i<SHORT VEGETATIVE PHASE</i< (<i<SVP</i<), a MADS-box transcription factor, regulates floral transition by repressing floral integrator genes and is involved in ABA-mediated drought stress. In this study, we transformed the poplar (<i<Populus</i<) clone “84K” with the <i<SVP-Like</i< gene, while stable overexpression transgenic lines were obtained. Transcriptome analysis of the leaves of the transgenic lines and WT (Wide Type) poplars revealed that a total of 477 genes showed significantly altered expression, overexpressing <i<SVL</i< genes, including 342 upregulated and 135 downregulated genes. Ten subclusters in DEGs were analyzed, and KEGG terms of the largest subcluster were associated with two key pathways: hormone-related genes and glutathione metabolism. Meanwhile, many transcriptional factors were involved. Our results are helpful for in-depth analysis of the MADS transcriptional factor in poplars. This work provides the basis for studying woody plant growth, and development and molecular mechanisms responded to environmental stresses.
abstract_unstemmed	Flowering is an essential part of the productive process, and flowering time is determined by endogenous genetic components and many ambient factors. <i<SHORT VEGETATIVE PHASE</i< (<i<SVP</i<), a MADS-box transcription factor, regulates floral transition by repressing floral integrator genes and is involved in ABA-mediated drought stress. In this study, we transformed the poplar (<i<Populus</i<) clone “84K” with the <i<SVP-Like</i< gene, while stable overexpression transgenic lines were obtained. Transcriptome analysis of the leaves of the transgenic lines and WT (Wide Type) poplars revealed that a total of 477 genes showed significantly altered expression, overexpressing <i<SVL</i< genes, including 342 upregulated and 135 downregulated genes. Ten subclusters in DEGs were analyzed, and KEGG terms of the largest subcluster were associated with two key pathways: hormone-related genes and glutathione metabolism. Meanwhile, many transcriptional factors were involved. Our results are helpful for in-depth analysis of the MADS transcriptional factor in poplars. This work provides the basis for studying woody plant growth, and development and molecular mechanisms responded to environmental stresses.
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title_short	Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor
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score	7.400222

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Transcriptome Analysis of <i<Populus</i< Overexpression in <i<SVL</i< Transcription Factor

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