Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response

<i<Pinus massoniana</i< is a species used in afforestation and has high economic, ecological, and therapeutic significance. <i<P. massoniana</i< experiences a variety of biotic and abiotic stresses, and thus presents a suitable model for studying how woody plants respond to s...
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Autor*in:	Ye Yang [verfasserIn] Romaric Hippolyte Agassin [verfasserIn] Kongshu Ji [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2023

Schlagwörter:	GRAS abiotic stresses hormone treatments development expression

Übergeordnetes Werk:	In: International Journal of Molecular Sciences - MDPI AG, 2003, 24(2023), 13, p 10690
Übergeordnetes Werk:	volume:24 ; year:2023 ; number:13, p 10690

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc Journal toc

DOI / URN:	10.3390/ijms241310690

Katalog-ID:	DOAJ094011133

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allfields	10.3390/ijms241310690 doi (DE-627)DOAJ094011133 (DE-599)DOAJe49ab125063c4f4b8361ba41fb009c0c DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Ye Yang verfasserin aut Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<Pinus massoniana</i< is a species used in afforestation and has high economic, ecological, and therapeutic significance. <i<P. massoniana</i< experiences a variety of biotic and abiotic stresses, and thus presents a suitable model for studying how woody plants respond to such stress. Numerous families of transcription factors are involved in the research of stress resistance, with the GRAS family playing a significant role in plant development and stress response. Though <i<GRAS</i<s have been well explored in various plant species, much research remains to be undertaken on the <i<GRAS</i< family in <i<P. massoniana</i<. In this study, 21 PmGRASs were identified in the <i<P. massoniana</i< transcriptome. <i<P. massoniana</i< and <i<Arabidopsis thaliana</i< phylogenetic analyses revealed that the PmGRAS family can be separated into nine subfamilies. The results of qRT-PCR and transcriptome analyses under various stress and hormone treatments reveal that PmGRASs, particularly PmGRAS9, PmGRAS10 and PmGRAS17, may be crucial for stress resistance. The majority of PmGRASs were significantly expressed in needles and may function at multiple locales and developmental stages, according to tissue-specific expression analyses. Furthermore, the DELLA subfamily members PmGRAS9 and PmGRAS17 were nuclear localization proteins, while PmGRAS9 demonstrated transcriptional activation activity in yeast. The results of this study will help explore the relevant factors regulating the development of <i<P. massoniana</i<, improve stress resistance and lay the foundation for further identification of the biological functions of PmGRASs. <i<Pinus massoniana</i< GRAS abiotic stresses hormone treatments development expression Biology (General) Chemistry Romaric Hippolyte Agassin verfasserin aut Kongshu Ji verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 24(2023), 13, p 10690 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:24 year:2023 number:13, p 10690 https://doi.org/10.3390/ijms241310690 kostenfrei https://doaj.org/article/e49ab125063c4f4b8361ba41fb009c0c kostenfrei https://www.mdpi.com/1422-0067/24/13/10690 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 24 2023 13, p 10690
spelling	10.3390/ijms241310690 doi (DE-627)DOAJ094011133 (DE-599)DOAJe49ab125063c4f4b8361ba41fb009c0c DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Ye Yang verfasserin aut Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<Pinus massoniana</i< is a species used in afforestation and has high economic, ecological, and therapeutic significance. <i<P. massoniana</i< experiences a variety of biotic and abiotic stresses, and thus presents a suitable model for studying how woody plants respond to such stress. Numerous families of transcription factors are involved in the research of stress resistance, with the GRAS family playing a significant role in plant development and stress response. Though <i<GRAS</i<s have been well explored in various plant species, much research remains to be undertaken on the <i<GRAS</i< family in <i<P. massoniana</i<. In this study, 21 PmGRASs were identified in the <i<P. massoniana</i< transcriptome. <i<P. massoniana</i< and <i<Arabidopsis thaliana</i< phylogenetic analyses revealed that the PmGRAS family can be separated into nine subfamilies. The results of qRT-PCR and transcriptome analyses under various stress and hormone treatments reveal that PmGRASs, particularly PmGRAS9, PmGRAS10 and PmGRAS17, may be crucial for stress resistance. The majority of PmGRASs were significantly expressed in needles and may function at multiple locales and developmental stages, according to tissue-specific expression analyses. Furthermore, the DELLA subfamily members PmGRAS9 and PmGRAS17 were nuclear localization proteins, while PmGRAS9 demonstrated transcriptional activation activity in yeast. The results of this study will help explore the relevant factors regulating the development of <i<P. massoniana</i<, improve stress resistance and lay the foundation for further identification of the biological functions of PmGRASs. <i<Pinus massoniana</i< GRAS abiotic stresses hormone treatments development expression Biology (General) Chemistry Romaric Hippolyte Agassin verfasserin aut Kongshu Ji verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 24(2023), 13, p 10690 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:24 year:2023 number:13, p 10690 https://doi.org/10.3390/ijms241310690 kostenfrei https://doaj.org/article/e49ab125063c4f4b8361ba41fb009c0c kostenfrei https://www.mdpi.com/1422-0067/24/13/10690 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 24 2023 13, p 10690
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allfieldsGer	10.3390/ijms241310690 doi (DE-627)DOAJ094011133 (DE-599)DOAJe49ab125063c4f4b8361ba41fb009c0c DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Ye Yang verfasserin aut Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<Pinus massoniana</i< is a species used in afforestation and has high economic, ecological, and therapeutic significance. <i<P. massoniana</i< experiences a variety of biotic and abiotic stresses, and thus presents a suitable model for studying how woody plants respond to such stress. Numerous families of transcription factors are involved in the research of stress resistance, with the GRAS family playing a significant role in plant development and stress response. Though <i<GRAS</i<s have been well explored in various plant species, much research remains to be undertaken on the <i<GRAS</i< family in <i<P. massoniana</i<. In this study, 21 PmGRASs were identified in the <i<P. massoniana</i< transcriptome. <i<P. massoniana</i< and <i<Arabidopsis thaliana</i< phylogenetic analyses revealed that the PmGRAS family can be separated into nine subfamilies. The results of qRT-PCR and transcriptome analyses under various stress and hormone treatments reveal that PmGRASs, particularly PmGRAS9, PmGRAS10 and PmGRAS17, may be crucial for stress resistance. The majority of PmGRASs were significantly expressed in needles and may function at multiple locales and developmental stages, according to tissue-specific expression analyses. Furthermore, the DELLA subfamily members PmGRAS9 and PmGRAS17 were nuclear localization proteins, while PmGRAS9 demonstrated transcriptional activation activity in yeast. The results of this study will help explore the relevant factors regulating the development of <i<P. massoniana</i<, improve stress resistance and lay the foundation for further identification of the biological functions of PmGRASs. <i<Pinus massoniana</i< GRAS abiotic stresses hormone treatments development expression Biology (General) Chemistry Romaric Hippolyte Agassin verfasserin aut Kongshu Ji verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 24(2023), 13, p 10690 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:24 year:2023 number:13, p 10690 https://doi.org/10.3390/ijms241310690 kostenfrei https://doaj.org/article/e49ab125063c4f4b8361ba41fb009c0c kostenfrei https://www.mdpi.com/1422-0067/24/13/10690 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 24 2023 13, p 10690
allfieldsSound	10.3390/ijms241310690 doi (DE-627)DOAJ094011133 (DE-599)DOAJe49ab125063c4f4b8361ba41fb009c0c DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Ye Yang verfasserin aut Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<Pinus massoniana</i< is a species used in afforestation and has high economic, ecological, and therapeutic significance. <i<P. massoniana</i< experiences a variety of biotic and abiotic stresses, and thus presents a suitable model for studying how woody plants respond to such stress. Numerous families of transcription factors are involved in the research of stress resistance, with the GRAS family playing a significant role in plant development and stress response. Though <i<GRAS</i<s have been well explored in various plant species, much research remains to be undertaken on the <i<GRAS</i< family in <i<P. massoniana</i<. In this study, 21 PmGRASs were identified in the <i<P. massoniana</i< transcriptome. <i<P. massoniana</i< and <i<Arabidopsis thaliana</i< phylogenetic analyses revealed that the PmGRAS family can be separated into nine subfamilies. The results of qRT-PCR and transcriptome analyses under various stress and hormone treatments reveal that PmGRASs, particularly PmGRAS9, PmGRAS10 and PmGRAS17, may be crucial for stress resistance. The majority of PmGRASs were significantly expressed in needles and may function at multiple locales and developmental stages, according to tissue-specific expression analyses. Furthermore, the DELLA subfamily members PmGRAS9 and PmGRAS17 were nuclear localization proteins, while PmGRAS9 demonstrated transcriptional activation activity in yeast. The results of this study will help explore the relevant factors regulating the development of <i<P. massoniana</i<, improve stress resistance and lay the foundation for further identification of the biological functions of PmGRASs. <i<Pinus massoniana</i< GRAS abiotic stresses hormone treatments development expression Biology (General) Chemistry Romaric Hippolyte Agassin verfasserin aut Kongshu Ji verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 24(2023), 13, p 10690 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:24 year:2023 number:13, p 10690 https://doi.org/10.3390/ijms241310690 kostenfrei https://doaj.org/article/e49ab125063c4f4b8361ba41fb009c0c kostenfrei https://www.mdpi.com/1422-0067/24/13/10690 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 24 2023 13, p 10690
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author	Ye Yang
spellingShingle	Ye Yang misc QH301-705.5 misc QD1-999 misc <i<Pinus massoniana</i< misc GRAS misc abiotic stresses misc hormone treatments misc development misc expression misc Biology (General) misc Chemistry Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response
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topic_title	QH301-705.5 QD1-999 Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response <i<Pinus massoniana</i< GRAS abiotic stresses hormone treatments development expression
topic	misc QH301-705.5 misc QD1-999 misc <i<Pinus massoniana</i< misc GRAS misc abiotic stresses misc hormone treatments misc development misc expression misc Biology (General) misc Chemistry
topic_unstemmed	misc QH301-705.5 misc QD1-999 misc <i<Pinus massoniana</i< misc GRAS misc abiotic stresses misc hormone treatments misc development misc expression misc Biology (General) misc Chemistry
topic_browse	misc QH301-705.5 misc QD1-999 misc <i<Pinus massoniana</i< misc GRAS misc abiotic stresses misc hormone treatments misc development misc expression misc Biology (General) misc Chemistry
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hierarchy_parent_title	International Journal of Molecular Sciences
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title	Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response
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title_full	Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response
author_sort	Ye Yang
journal	International Journal of Molecular Sciences
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author_browse	Ye Yang Romaric Hippolyte Agassin Kongshu Ji
container_volume	24
class	QH301-705.5 QD1-999
format_se	Elektronische Aufsätze
author-letter	Ye Yang
doi_str_mv	10.3390/ijms241310690
author2-role	verfasserin
title_sort	transcriptome-wide identification of the gras transcription factor family in <i<pinus massoniana</i< and its role in regulating development and stress response
callnumber	QH301-705.5
title_auth	Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response
abstract	<i<Pinus massoniana</i< is a species used in afforestation and has high economic, ecological, and therapeutic significance. <i<P. massoniana</i< experiences a variety of biotic and abiotic stresses, and thus presents a suitable model for studying how woody plants respond to such stress. Numerous families of transcription factors are involved in the research of stress resistance, with the GRAS family playing a significant role in plant development and stress response. Though <i<GRAS</i<s have been well explored in various plant species, much research remains to be undertaken on the <i<GRAS</i< family in <i<P. massoniana</i<. In this study, 21 PmGRASs were identified in the <i<P. massoniana</i< transcriptome. <i<P. massoniana</i< and <i<Arabidopsis thaliana</i< phylogenetic analyses revealed that the PmGRAS family can be separated into nine subfamilies. The results of qRT-PCR and transcriptome analyses under various stress and hormone treatments reveal that PmGRASs, particularly PmGRAS9, PmGRAS10 and PmGRAS17, may be crucial for stress resistance. The majority of PmGRASs were significantly expressed in needles and may function at multiple locales and developmental stages, according to tissue-specific expression analyses. Furthermore, the DELLA subfamily members PmGRAS9 and PmGRAS17 were nuclear localization proteins, while PmGRAS9 demonstrated transcriptional activation activity in yeast. The results of this study will help explore the relevant factors regulating the development of <i<P. massoniana</i<, improve stress resistance and lay the foundation for further identification of the biological functions of PmGRASs.
abstractGer	<i<Pinus massoniana</i< is a species used in afforestation and has high economic, ecological, and therapeutic significance. <i<P. massoniana</i< experiences a variety of biotic and abiotic stresses, and thus presents a suitable model for studying how woody plants respond to such stress. Numerous families of transcription factors are involved in the research of stress resistance, with the GRAS family playing a significant role in plant development and stress response. Though <i<GRAS</i<s have been well explored in various plant species, much research remains to be undertaken on the <i<GRAS</i< family in <i<P. massoniana</i<. In this study, 21 PmGRASs were identified in the <i<P. massoniana</i< transcriptome. <i<P. massoniana</i< and <i<Arabidopsis thaliana</i< phylogenetic analyses revealed that the PmGRAS family can be separated into nine subfamilies. The results of qRT-PCR and transcriptome analyses under various stress and hormone treatments reveal that PmGRASs, particularly PmGRAS9, PmGRAS10 and PmGRAS17, may be crucial for stress resistance. The majority of PmGRASs were significantly expressed in needles and may function at multiple locales and developmental stages, according to tissue-specific expression analyses. Furthermore, the DELLA subfamily members PmGRAS9 and PmGRAS17 were nuclear localization proteins, while PmGRAS9 demonstrated transcriptional activation activity in yeast. The results of this study will help explore the relevant factors regulating the development of <i<P. massoniana</i<, improve stress resistance and lay the foundation for further identification of the biological functions of PmGRASs.
abstract_unstemmed	<i<Pinus massoniana</i< is a species used in afforestation and has high economic, ecological, and therapeutic significance. <i<P. massoniana</i< experiences a variety of biotic and abiotic stresses, and thus presents a suitable model for studying how woody plants respond to such stress. Numerous families of transcription factors are involved in the research of stress resistance, with the GRAS family playing a significant role in plant development and stress response. Though <i<GRAS</i<s have been well explored in various plant species, much research remains to be undertaken on the <i<GRAS</i< family in <i<P. massoniana</i<. In this study, 21 PmGRASs were identified in the <i<P. massoniana</i< transcriptome. <i<P. massoniana</i< and <i<Arabidopsis thaliana</i< phylogenetic analyses revealed that the PmGRAS family can be separated into nine subfamilies. The results of qRT-PCR and transcriptome analyses under various stress and hormone treatments reveal that PmGRASs, particularly PmGRAS9, PmGRAS10 and PmGRAS17, may be crucial for stress resistance. The majority of PmGRASs were significantly expressed in needles and may function at multiple locales and developmental stages, according to tissue-specific expression analyses. Furthermore, the DELLA subfamily members PmGRAS9 and PmGRAS17 were nuclear localization proteins, while PmGRAS9 demonstrated transcriptional activation activity in yeast. The results of this study will help explore the relevant factors regulating the development of <i<P. massoniana</i<, improve stress resistance and lay the foundation for further identification of the biological functions of PmGRASs.
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title_short	Transcriptome-Wide Identification of the GRAS Transcription Factor Family in <i<Pinus massoniana</i< and Its Role in Regulating Development and Stress Response
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