Description of <i<Cylindrospermum solincola</i< sp. nov. from Jammu and Kashmir, India and Further Insights into the Ecological Distribution and Morphological Attributes of <i<Cylindrospermum badium</i<
Two cyanobacterial strains KUT1-PS and 18C-PS were collected from the soil surface and vernal pool, respectively, from the Basantgarh village, Udhampur district of the union territory of Jammu and Kashmir, India and characterized by a polyphasic approach. The morphological characterization indicated...
Ausführliche Beschreibung
Autor*in: |
Naresh Kumar [verfasserIn] Aniket Saraf [verfasserIn] Sagarika Pal [verfasserIn] Prashant Singh [verfasserIn] |
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Format: |
E-Artikel |
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Sprache: |
Englisch |
Erschienen: |
2023 |
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Schlagwörter: |
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Übergeordnetes Werk: |
In: Diversity - MDPI AG, 2009, 15(2023), 5, p 592 |
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Übergeordnetes Werk: |
volume:15 ; year:2023 ; number:5, p 592 |
Links: |
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DOI / URN: |
10.3390/d15050592 |
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Katalog-ID: |
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10.3390/d15050592 doi (DE-627)DOAJ09439279X (DE-599)DOAJ99a9ac83980b4c069644b8de49f8e9ed DE-627 ger DE-627 rakwb eng QH301-705.5 Naresh Kumar verfasserin aut Description of <i<Cylindrospermum solincola</i< sp. nov. from Jammu and Kashmir, India and Further Insights into the Ecological Distribution and Morphological Attributes of <i<Cylindrospermum badium</i< 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Two cyanobacterial strains KUT1-PS and 18C-PS were collected from the soil surface and vernal pool, respectively, from the Basantgarh village, Udhampur district of the union territory of Jammu and Kashmir, India and characterized by a polyphasic approach. The morphological characterization indicated that both the strains showed typical <i<Cylindrospermum</i<-like morphology and probably belonged to the genus <i<Cylindrospermum</i<. Further, phylogenetic interpretations at the genus level were made using the 16S rRNA gene while the 16S-23S ITS region phylogenetic analysis and secondary structure analysis were conducted to enhance the resolution at the species level. The results from the comparative morphological analysis, the 16S rRNA gene percent similarity and phylogenetic analyses, the 16S-23S ITS percent dissimilarity and the ITS secondary structure analyses provided enough evidence that the strain 18C-PS is a representative of <i<Cylindrospermum badium,</i< providing further insights into its ecological distribution and morphological attributes. Additionally, the strain KUT1-PS was a novel species of the genus <i<Cylindrospermum</i< and is referred to herein as <i<Cylindrospermum solincola</i< sp. nov., in accordance with the International Code of Nomenclature for algae, fungi and plants. This study also discusses the importance of comparing the newly sequenced strains with previously established species before making final taxonomic interpretations. cyanobacteria <i<Cylindrospermum</i< India 16S rRNA gene 16S-23S ITS polyphasic approach Biology (General) Aniket Saraf verfasserin aut Sagarika Pal verfasserin aut Prashant Singh verfasserin aut In Diversity MDPI AG, 2009 15(2023), 5, p 592 (DE-627)610602756 (DE-600)2518137-3 14242818 nnns volume:15 year:2023 number:5, p 592 https://doi.org/10.3390/d15050592 kostenfrei https://doaj.org/article/99a9ac83980b4c069644b8de49f8e9ed kostenfrei https://www.mdpi.com/1424-2818/15/5/592 kostenfrei https://doaj.org/toc/1424-2818 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 15 2023 5, p 592 |
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QH301-705.5 Description of <i<Cylindrospermum solincola</i< sp. nov. from Jammu and Kashmir, India and Further Insights into the Ecological Distribution and Morphological Attributes of <i<Cylindrospermum badium</i< cyanobacteria <i<Cylindrospermum</i< India 16S rRNA gene 16S-23S ITS polyphasic approach |
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description of <i<cylindrospermum solincola</i< sp. nov. from jammu and kashmir, india and further insights into the ecological distribution and morphological attributes of <i<cylindrospermum badium</i< |
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Description of <i<Cylindrospermum solincola</i< sp. nov. from Jammu and Kashmir, India and Further Insights into the Ecological Distribution and Morphological Attributes of <i<Cylindrospermum badium</i< |
abstract |
Two cyanobacterial strains KUT1-PS and 18C-PS were collected from the soil surface and vernal pool, respectively, from the Basantgarh village, Udhampur district of the union territory of Jammu and Kashmir, India and characterized by a polyphasic approach. The morphological characterization indicated that both the strains showed typical <i<Cylindrospermum</i<-like morphology and probably belonged to the genus <i<Cylindrospermum</i<. Further, phylogenetic interpretations at the genus level were made using the 16S rRNA gene while the 16S-23S ITS region phylogenetic analysis and secondary structure analysis were conducted to enhance the resolution at the species level. The results from the comparative morphological analysis, the 16S rRNA gene percent similarity and phylogenetic analyses, the 16S-23S ITS percent dissimilarity and the ITS secondary structure analyses provided enough evidence that the strain 18C-PS is a representative of <i<Cylindrospermum badium,</i< providing further insights into its ecological distribution and morphological attributes. Additionally, the strain KUT1-PS was a novel species of the genus <i<Cylindrospermum</i< and is referred to herein as <i<Cylindrospermum solincola</i< sp. nov., in accordance with the International Code of Nomenclature for algae, fungi and plants. This study also discusses the importance of comparing the newly sequenced strains with previously established species before making final taxonomic interpretations. |
abstractGer |
Two cyanobacterial strains KUT1-PS and 18C-PS were collected from the soil surface and vernal pool, respectively, from the Basantgarh village, Udhampur district of the union territory of Jammu and Kashmir, India and characterized by a polyphasic approach. The morphological characterization indicated that both the strains showed typical <i<Cylindrospermum</i<-like morphology and probably belonged to the genus <i<Cylindrospermum</i<. Further, phylogenetic interpretations at the genus level were made using the 16S rRNA gene while the 16S-23S ITS region phylogenetic analysis and secondary structure analysis were conducted to enhance the resolution at the species level. The results from the comparative morphological analysis, the 16S rRNA gene percent similarity and phylogenetic analyses, the 16S-23S ITS percent dissimilarity and the ITS secondary structure analyses provided enough evidence that the strain 18C-PS is a representative of <i<Cylindrospermum badium,</i< providing further insights into its ecological distribution and morphological attributes. Additionally, the strain KUT1-PS was a novel species of the genus <i<Cylindrospermum</i< and is referred to herein as <i<Cylindrospermum solincola</i< sp. nov., in accordance with the International Code of Nomenclature for algae, fungi and plants. This study also discusses the importance of comparing the newly sequenced strains with previously established species before making final taxonomic interpretations. |
abstract_unstemmed |
Two cyanobacterial strains KUT1-PS and 18C-PS were collected from the soil surface and vernal pool, respectively, from the Basantgarh village, Udhampur district of the union territory of Jammu and Kashmir, India and characterized by a polyphasic approach. The morphological characterization indicated that both the strains showed typical <i<Cylindrospermum</i<-like morphology and probably belonged to the genus <i<Cylindrospermum</i<. Further, phylogenetic interpretations at the genus level were made using the 16S rRNA gene while the 16S-23S ITS region phylogenetic analysis and secondary structure analysis were conducted to enhance the resolution at the species level. The results from the comparative morphological analysis, the 16S rRNA gene percent similarity and phylogenetic analyses, the 16S-23S ITS percent dissimilarity and the ITS secondary structure analyses provided enough evidence that the strain 18C-PS is a representative of <i<Cylindrospermum badium,</i< providing further insights into its ecological distribution and morphological attributes. Additionally, the strain KUT1-PS was a novel species of the genus <i<Cylindrospermum</i< and is referred to herein as <i<Cylindrospermum solincola</i< sp. nov., in accordance with the International Code of Nomenclature for algae, fungi and plants. This study also discusses the importance of comparing the newly sequenced strains with previously established species before making final taxonomic interpretations. |
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Description of <i<Cylindrospermum solincola</i< sp. nov. from Jammu and Kashmir, India and Further Insights into the Ecological Distribution and Morphological Attributes of <i<Cylindrospermum badium</i< |
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The morphological characterization indicated that both the strains showed typical <i<Cylindrospermum</i<-like morphology and probably belonged to the genus <i<Cylindrospermum</i<. Further, phylogenetic interpretations at the genus level were made using the 16S rRNA gene while the 16S-23S ITS region phylogenetic analysis and secondary structure analysis were conducted to enhance the resolution at the species level. The results from the comparative morphological analysis, the 16S rRNA gene percent similarity and phylogenetic analyses, the 16S-23S ITS percent dissimilarity and the ITS secondary structure analyses provided enough evidence that the strain 18C-PS is a representative of <i<Cylindrospermum badium,</i< providing further insights into its ecological distribution and morphological attributes. 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