The complete chloroplast genome of a fern genus Thelypteris interrupta

In this study, we report the complete chloroplast (cp) genome of Thelypteris interrupta, a fern member, and comparative analysis with its related family members. The cp genome was 155,983 bp long, with a typical quadripartite structure including a pair of inverted repeat regions (25,614 bp) separate...
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Autor*in:	Rahul Vasudeo Ramekar [verfasserIn] Ik-Young Choi [verfasserIn] Myounghai Kwak [verfasserIn] Eun Ju Cheong [verfasserIn] Kyong-Cheul Park [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2020

Schlagwörter:	chloroplast genome thelypteris interrupta

Übergeordnetes Werk:	In: Mitochondrial DNA. Part B. Resources - Taylor & Francis Group, 2023, 5(2020), 1, Seite 572-573
Übergeordnetes Werk:	volume:5 ; year:2020 ; number:1 ; pages:572-573

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.1080/23802359.2019.1710294

Katalog-ID:	DOAJ096877995

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spelling	10.1080/23802359.2019.1710294 doi (DE-627)DOAJ096877995 (DE-599)DOAJ57169cc8b5bc4398963a3b6ae04ba088 DE-627 ger DE-627 rakwb eng QH426-470 Rahul Vasudeo Ramekar verfasserin aut The complete chloroplast genome of a fern genus Thelypteris interrupta 2020 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier In this study, we report the complete chloroplast (cp) genome of Thelypteris interrupta, a fern member, and comparative analysis with its related family members. The cp genome was 155,983 bp long, with a typical quadripartite structure including a pair of inverted repeat regions (25,614 bp) separated by a large (82,769 bp) and small (21,986 bp) single-copy (SC) region. The genome encodes a total of 88 protein-coding genes, 35 tRNA genes, and 8 rRNA genes. Additionally, we identified 86 RNA editing sites in 52 genes; most of the substitution was U to C (52 sites), while C to U conversion occurred in 34 positions. The phylogenetic analysis strongly supported the relationship of T. interrupta with Ampelopteris prolifera and Christella appendiculata of Thelypteridoideae family. chloroplast genome thelypteris interrupta Genetics Ik-Young Choi verfasserin aut Myounghai Kwak verfasserin aut Eun Ju Cheong verfasserin aut Kyong-Cheul Park verfasserin aut In Mitochondrial DNA. Part B. Resources Taylor & Francis Group, 2023 5(2020), 1, Seite 572-573 (DE-627)867996722 (DE-600)2868557-X 23802359 nnns volume:5 year:2020 number:1 pages:572-573 https://doi.org/10.1080/23802359.2019.1710294 kostenfrei https://doaj.org/article/57169cc8b5bc4398963a3b6ae04ba088 kostenfrei http://dx.doi.org/10.1080/23802359.2019.1710294 kostenfrei https://doaj.org/toc/2380-2359 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 5 2020 1 572-573
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language	English
source	In Mitochondrial DNA. Part B. Resources 5(2020), 1, Seite 572-573 volume:5 year:2020 number:1 pages:572-573
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author	Rahul Vasudeo Ramekar
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topic_title	QH426-470 The complete chloroplast genome of a fern genus Thelypteris interrupta chloroplast genome thelypteris interrupta
topic	misc QH426-470 misc chloroplast genome misc thelypteris interrupta misc Genetics
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title	The complete chloroplast genome of a fern genus Thelypteris interrupta
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title_full	The complete chloroplast genome of a fern genus Thelypteris interrupta
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title_auth	The complete chloroplast genome of a fern genus Thelypteris interrupta
abstract	In this study, we report the complete chloroplast (cp) genome of Thelypteris interrupta, a fern member, and comparative analysis with its related family members. The cp genome was 155,983 bp long, with a typical quadripartite structure including a pair of inverted repeat regions (25,614 bp) separated by a large (82,769 bp) and small (21,986 bp) single-copy (SC) region. The genome encodes a total of 88 protein-coding genes, 35 tRNA genes, and 8 rRNA genes. Additionally, we identified 86 RNA editing sites in 52 genes; most of the substitution was U to C (52 sites), while C to U conversion occurred in 34 positions. The phylogenetic analysis strongly supported the relationship of T. interrupta with Ampelopteris prolifera and Christella appendiculata of Thelypteridoideae family.
abstractGer	In this study, we report the complete chloroplast (cp) genome of Thelypteris interrupta, a fern member, and comparative analysis with its related family members. The cp genome was 155,983 bp long, with a typical quadripartite structure including a pair of inverted repeat regions (25,614 bp) separated by a large (82,769 bp) and small (21,986 bp) single-copy (SC) region. The genome encodes a total of 88 protein-coding genes, 35 tRNA genes, and 8 rRNA genes. Additionally, we identified 86 RNA editing sites in 52 genes; most of the substitution was U to C (52 sites), while C to U conversion occurred in 34 positions. The phylogenetic analysis strongly supported the relationship of T. interrupta with Ampelopteris prolifera and Christella appendiculata of Thelypteridoideae family.
abstract_unstemmed	In this study, we report the complete chloroplast (cp) genome of Thelypteris interrupta, a fern member, and comparative analysis with its related family members. The cp genome was 155,983 bp long, with a typical quadripartite structure including a pair of inverted repeat regions (25,614 bp) separated by a large (82,769 bp) and small (21,986 bp) single-copy (SC) region. The genome encodes a total of 88 protein-coding genes, 35 tRNA genes, and 8 rRNA genes. Additionally, we identified 86 RNA editing sites in 52 genes; most of the substitution was U to C (52 sites), while C to U conversion occurred in 34 positions. The phylogenetic analysis strongly supported the relationship of T. interrupta with Ampelopteris prolifera and Christella appendiculata of Thelypteridoideae family.
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title_short	The complete chloroplast genome of a fern genus Thelypteris interrupta
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The complete chloroplast genome of a fern genus Thelypteris interrupta

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Zugang & Verfügbarkeit

Vorhandene Bände

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