Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley

Stearoyl-acyl carrier protein (ACP) Δ9 desaturase (SAD) is a critical fatty acid dehydrogenase in plants, playing a prominent role in regulating the synthesis of unsaturated fatty acids (UFAs) and having a significant impact on plant growth and development. In this study, we conducted a comprehensiv...
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Autor*in:	Mingyu Ding [verfasserIn] Danni Zhou [verfasserIn] Yichen Ye [verfasserIn] Shuting Wen [verfasserIn] Xian Zhang [verfasserIn] Quanxiang Tian [verfasserIn] Xiaoqin Zhang [verfasserIn] Wangshu Mou [verfasserIn] Cong Dang [verfasserIn] Yunxia Fang [verfasserIn] Dawei Xue [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2023

Schlagwörter:	barley SAD evolution unsaturated fatty acids (UFAs) abiotic stress

Übergeordnetes Werk:	In: International Journal of Molecular Sciences - MDPI AG, 2003, 25(2023), 1, p 113
Übergeordnetes Werk:	volume:25 ; year:2023 ; number:1, p 113

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc Journal toc

DOI / URN:	10.3390/ijms25010113

Katalog-ID:	DOAJ097796395

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allfields	10.3390/ijms25010113 doi (DE-627)DOAJ097796395 (DE-599)DOAJf66b25839cf14eb18902c6da4a107399 DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Mingyu Ding verfasserin aut Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Stearoyl-acyl carrier protein (ACP) Δ9 desaturase (SAD) is a critical fatty acid dehydrogenase in plants, playing a prominent role in regulating the synthesis of unsaturated fatty acids (UFAs) and having a significant impact on plant growth and development. In this study, we conducted a comprehensive genomic analysis of the SAD family in barley (<i<Hordeum vulgare</i< L.), identifying 14 HvSADs with the FA_desaturase_2 domain, which were divided into four subgroups based on sequence composition and phylogenetic analysis, with members of the same subgroup possessing similar genes and motif structures. Gene replication analysis suggested that tandem and segmental duplication may be the major reasons for the expansion of the <i<SAD</i< family in barley. The promoters of <i<HvSADs</i< contained various <i<cis</i<-regulatory elements (CREs) related to light, abscisic acid (ABA), and methyl jasmonate (MeJA). In addition, expression analysis indicated that <i<HvSADs</i< exhibit multiple tissue expression patterns in barley as well as different response characteristics under three abiotic stresses: salt, drought, and cold. Briefly, this evolutionary and expression analysis of <i<HvSADs</i< provides insight into the biological functions of barley, supporting a comprehensive analysis of the regulatory mechanisms of oil biosynthesis and metabolism in plants under abiotic stress. barley SAD evolution unsaturated fatty acids (UFAs) abiotic stress Biology (General) Chemistry Danni Zhou verfasserin aut Yichen Ye verfasserin aut Shuting Wen verfasserin aut Xian Zhang verfasserin aut Quanxiang Tian verfasserin aut Xiaoqin Zhang verfasserin aut Wangshu Mou verfasserin aut Cong Dang verfasserin aut Yunxia Fang verfasserin aut Dawei Xue verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 25(2023), 1, p 113 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:25 year:2023 number:1, p 113 https://doi.org/10.3390/ijms25010113 kostenfrei https://doaj.org/article/f66b25839cf14eb18902c6da4a107399 kostenfrei https://www.mdpi.com/1422-0067/25/1/113 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 25 2023 1, p 113
spelling	10.3390/ijms25010113 doi (DE-627)DOAJ097796395 (DE-599)DOAJf66b25839cf14eb18902c6da4a107399 DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Mingyu Ding verfasserin aut Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Stearoyl-acyl carrier protein (ACP) Δ9 desaturase (SAD) is a critical fatty acid dehydrogenase in plants, playing a prominent role in regulating the synthesis of unsaturated fatty acids (UFAs) and having a significant impact on plant growth and development. In this study, we conducted a comprehensive genomic analysis of the SAD family in barley (<i<Hordeum vulgare</i< L.), identifying 14 HvSADs with the FA_desaturase_2 domain, which were divided into four subgroups based on sequence composition and phylogenetic analysis, with members of the same subgroup possessing similar genes and motif structures. Gene replication analysis suggested that tandem and segmental duplication may be the major reasons for the expansion of the <i<SAD</i< family in barley. The promoters of <i<HvSADs</i< contained various <i<cis</i<-regulatory elements (CREs) related to light, abscisic acid (ABA), and methyl jasmonate (MeJA). In addition, expression analysis indicated that <i<HvSADs</i< exhibit multiple tissue expression patterns in barley as well as different response characteristics under three abiotic stresses: salt, drought, and cold. Briefly, this evolutionary and expression analysis of <i<HvSADs</i< provides insight into the biological functions of barley, supporting a comprehensive analysis of the regulatory mechanisms of oil biosynthesis and metabolism in plants under abiotic stress. barley SAD evolution unsaturated fatty acids (UFAs) abiotic stress Biology (General) Chemistry Danni Zhou verfasserin aut Yichen Ye verfasserin aut Shuting Wen verfasserin aut Xian Zhang verfasserin aut Quanxiang Tian verfasserin aut Xiaoqin Zhang verfasserin aut Wangshu Mou verfasserin aut Cong Dang verfasserin aut Yunxia Fang verfasserin aut Dawei Xue verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 25(2023), 1, p 113 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:25 year:2023 number:1, p 113 https://doi.org/10.3390/ijms25010113 kostenfrei https://doaj.org/article/f66b25839cf14eb18902c6da4a107399 kostenfrei https://www.mdpi.com/1422-0067/25/1/113 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 25 2023 1, p 113
allfields_unstemmed	10.3390/ijms25010113 doi (DE-627)DOAJ097796395 (DE-599)DOAJf66b25839cf14eb18902c6da4a107399 DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Mingyu Ding verfasserin aut Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Stearoyl-acyl carrier protein (ACP) Δ9 desaturase (SAD) is a critical fatty acid dehydrogenase in plants, playing a prominent role in regulating the synthesis of unsaturated fatty acids (UFAs) and having a significant impact on plant growth and development. In this study, we conducted a comprehensive genomic analysis of the SAD family in barley (<i<Hordeum vulgare</i< L.), identifying 14 HvSADs with the FA_desaturase_2 domain, which were divided into four subgroups based on sequence composition and phylogenetic analysis, with members of the same subgroup possessing similar genes and motif structures. Gene replication analysis suggested that tandem and segmental duplication may be the major reasons for the expansion of the <i<SAD</i< family in barley. The promoters of <i<HvSADs</i< contained various <i<cis</i<-regulatory elements (CREs) related to light, abscisic acid (ABA), and methyl jasmonate (MeJA). In addition, expression analysis indicated that <i<HvSADs</i< exhibit multiple tissue expression patterns in barley as well as different response characteristics under three abiotic stresses: salt, drought, and cold. Briefly, this evolutionary and expression analysis of <i<HvSADs</i< provides insight into the biological functions of barley, supporting a comprehensive analysis of the regulatory mechanisms of oil biosynthesis and metabolism in plants under abiotic stress. barley SAD evolution unsaturated fatty acids (UFAs) abiotic stress Biology (General) Chemistry Danni Zhou verfasserin aut Yichen Ye verfasserin aut Shuting Wen verfasserin aut Xian Zhang verfasserin aut Quanxiang Tian verfasserin aut Xiaoqin Zhang verfasserin aut Wangshu Mou verfasserin aut Cong Dang verfasserin aut Yunxia Fang verfasserin aut Dawei Xue verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 25(2023), 1, p 113 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:25 year:2023 number:1, p 113 https://doi.org/10.3390/ijms25010113 kostenfrei https://doaj.org/article/f66b25839cf14eb18902c6da4a107399 kostenfrei https://www.mdpi.com/1422-0067/25/1/113 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 25 2023 1, p 113
allfieldsGer	10.3390/ijms25010113 doi (DE-627)DOAJ097796395 (DE-599)DOAJf66b25839cf14eb18902c6da4a107399 DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Mingyu Ding verfasserin aut Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Stearoyl-acyl carrier protein (ACP) Δ9 desaturase (SAD) is a critical fatty acid dehydrogenase in plants, playing a prominent role in regulating the synthesis of unsaturated fatty acids (UFAs) and having a significant impact on plant growth and development. In this study, we conducted a comprehensive genomic analysis of the SAD family in barley (<i<Hordeum vulgare</i< L.), identifying 14 HvSADs with the FA_desaturase_2 domain, which were divided into four subgroups based on sequence composition and phylogenetic analysis, with members of the same subgroup possessing similar genes and motif structures. Gene replication analysis suggested that tandem and segmental duplication may be the major reasons for the expansion of the <i<SAD</i< family in barley. The promoters of <i<HvSADs</i< contained various <i<cis</i<-regulatory elements (CREs) related to light, abscisic acid (ABA), and methyl jasmonate (MeJA). In addition, expression analysis indicated that <i<HvSADs</i< exhibit multiple tissue expression patterns in barley as well as different response characteristics under three abiotic stresses: salt, drought, and cold. Briefly, this evolutionary and expression analysis of <i<HvSADs</i< provides insight into the biological functions of barley, supporting a comprehensive analysis of the regulatory mechanisms of oil biosynthesis and metabolism in plants under abiotic stress. barley SAD evolution unsaturated fatty acids (UFAs) abiotic stress Biology (General) Chemistry Danni Zhou verfasserin aut Yichen Ye verfasserin aut Shuting Wen verfasserin aut Xian Zhang verfasserin aut Quanxiang Tian verfasserin aut Xiaoqin Zhang verfasserin aut Wangshu Mou verfasserin aut Cong Dang verfasserin aut Yunxia Fang verfasserin aut Dawei Xue verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 25(2023), 1, p 113 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:25 year:2023 number:1, p 113 https://doi.org/10.3390/ijms25010113 kostenfrei https://doaj.org/article/f66b25839cf14eb18902c6da4a107399 kostenfrei https://www.mdpi.com/1422-0067/25/1/113 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 25 2023 1, p 113
allfieldsSound	10.3390/ijms25010113 doi (DE-627)DOAJ097796395 (DE-599)DOAJf66b25839cf14eb18902c6da4a107399 DE-627 ger DE-627 rakwb eng QH301-705.5 QD1-999 Mingyu Ding verfasserin aut Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Stearoyl-acyl carrier protein (ACP) Δ9 desaturase (SAD) is a critical fatty acid dehydrogenase in plants, playing a prominent role in regulating the synthesis of unsaturated fatty acids (UFAs) and having a significant impact on plant growth and development. In this study, we conducted a comprehensive genomic analysis of the SAD family in barley (<i<Hordeum vulgare</i< L.), identifying 14 HvSADs with the FA_desaturase_2 domain, which were divided into four subgroups based on sequence composition and phylogenetic analysis, with members of the same subgroup possessing similar genes and motif structures. Gene replication analysis suggested that tandem and segmental duplication may be the major reasons for the expansion of the <i<SAD</i< family in barley. The promoters of <i<HvSADs</i< contained various <i<cis</i<-regulatory elements (CREs) related to light, abscisic acid (ABA), and methyl jasmonate (MeJA). In addition, expression analysis indicated that <i<HvSADs</i< exhibit multiple tissue expression patterns in barley as well as different response characteristics under three abiotic stresses: salt, drought, and cold. Briefly, this evolutionary and expression analysis of <i<HvSADs</i< provides insight into the biological functions of barley, supporting a comprehensive analysis of the regulatory mechanisms of oil biosynthesis and metabolism in plants under abiotic stress. barley SAD evolution unsaturated fatty acids (UFAs) abiotic stress Biology (General) Chemistry Danni Zhou verfasserin aut Yichen Ye verfasserin aut Shuting Wen verfasserin aut Xian Zhang verfasserin aut Quanxiang Tian verfasserin aut Xiaoqin Zhang verfasserin aut Wangshu Mou verfasserin aut Cong Dang verfasserin aut Yunxia Fang verfasserin aut Dawei Xue verfasserin aut In International Journal of Molecular Sciences MDPI AG, 2003 25(2023), 1, p 113 (DE-627)316340715 (DE-600)2019364-6 14220067 nnns volume:25 year:2023 number:1, p 113 https://doi.org/10.3390/ijms25010113 kostenfrei https://doaj.org/article/f66b25839cf14eb18902c6da4a107399 kostenfrei https://www.mdpi.com/1422-0067/25/1/113 kostenfrei https://doaj.org/toc/1661-6596 Journal toc kostenfrei https://doaj.org/toc/1422-0067 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 25 2023 1, p 113
language	English
source	In International Journal of Molecular Sciences 25(2023), 1, p 113 volume:25 year:2023 number:1, p 113
sourceStr	In International Journal of Molecular Sciences 25(2023), 1, p 113 volume:25 year:2023 number:1, p 113
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	barley SAD evolution unsaturated fatty acids (UFAs) abiotic stress Biology (General) Chemistry
isfreeaccess_bool	true
container_title	International Journal of Molecular Sciences
authorswithroles_txt_mv	Mingyu Ding @@aut@@ Danni Zhou @@aut@@ Yichen Ye @@aut@@ Shuting Wen @@aut@@ Xian Zhang @@aut@@ Quanxiang Tian @@aut@@ Xiaoqin Zhang @@aut@@ Wangshu Mou @@aut@@ Cong Dang @@aut@@ Yunxia Fang @@aut@@ Dawei Xue @@aut@@
publishDateDaySort_date	2023-01-01T00:00:00Z
hierarchy_top_id	316340715
id	DOAJ097796395
language_de	englisch
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callnumber-first	Q - Science
author	Mingyu Ding
spellingShingle	Mingyu Ding misc QH301-705.5 misc QD1-999 misc barley misc SAD misc evolution misc unsaturated fatty acids (UFAs) misc abiotic stress misc Biology (General) misc Chemistry Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley
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topic_title	QH301-705.5 QD1-999 Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley barley SAD evolution unsaturated fatty acids (UFAs) abiotic stress
topic	misc QH301-705.5 misc QD1-999 misc barley misc SAD misc evolution misc unsaturated fatty acids (UFAs) misc abiotic stress misc Biology (General) misc Chemistry
topic_unstemmed	misc QH301-705.5 misc QD1-999 misc barley misc SAD misc evolution misc unsaturated fatty acids (UFAs) misc abiotic stress misc Biology (General) misc Chemistry
topic_browse	misc QH301-705.5 misc QD1-999 misc barley misc SAD misc evolution misc unsaturated fatty acids (UFAs) misc abiotic stress misc Biology (General) misc Chemistry
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title	Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley
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title_full	Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley
author_sort	Mingyu Ding
journal	International Journal of Molecular Sciences
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author_browse	Mingyu Ding Danni Zhou Yichen Ye Shuting Wen Xian Zhang Quanxiang Tian Xiaoqin Zhang Wangshu Mou Cong Dang Yunxia Fang Dawei Xue
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author-letter	Mingyu Ding
doi_str_mv	10.3390/ijms25010113
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title_sort	genome-wide identification and expression analysis of the stearoyl-acyl carrier protein δ9 desaturase gene family under abiotic stress in barley
callnumber	QH301-705.5
title_auth	Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley
abstract	Stearoyl-acyl carrier protein (ACP) Δ9 desaturase (SAD) is a critical fatty acid dehydrogenase in plants, playing a prominent role in regulating the synthesis of unsaturated fatty acids (UFAs) and having a significant impact on plant growth and development. In this study, we conducted a comprehensive genomic analysis of the SAD family in barley (<i<Hordeum vulgare</i< L.), identifying 14 HvSADs with the FA_desaturase_2 domain, which were divided into four subgroups based on sequence composition and phylogenetic analysis, with members of the same subgroup possessing similar genes and motif structures. Gene replication analysis suggested that tandem and segmental duplication may be the major reasons for the expansion of the <i<SAD</i< family in barley. The promoters of <i<HvSADs</i< contained various <i<cis</i<-regulatory elements (CREs) related to light, abscisic acid (ABA), and methyl jasmonate (MeJA). In addition, expression analysis indicated that <i<HvSADs</i< exhibit multiple tissue expression patterns in barley as well as different response characteristics under three abiotic stresses: salt, drought, and cold. Briefly, this evolutionary and expression analysis of <i<HvSADs</i< provides insight into the biological functions of barley, supporting a comprehensive analysis of the regulatory mechanisms of oil biosynthesis and metabolism in plants under abiotic stress.
abstractGer	Stearoyl-acyl carrier protein (ACP) Δ9 desaturase (SAD) is a critical fatty acid dehydrogenase in plants, playing a prominent role in regulating the synthesis of unsaturated fatty acids (UFAs) and having a significant impact on plant growth and development. In this study, we conducted a comprehensive genomic analysis of the SAD family in barley (<i<Hordeum vulgare</i< L.), identifying 14 HvSADs with the FA_desaturase_2 domain, which were divided into four subgroups based on sequence composition and phylogenetic analysis, with members of the same subgroup possessing similar genes and motif structures. Gene replication analysis suggested that tandem and segmental duplication may be the major reasons for the expansion of the <i<SAD</i< family in barley. The promoters of <i<HvSADs</i< contained various <i<cis</i<-regulatory elements (CREs) related to light, abscisic acid (ABA), and methyl jasmonate (MeJA). In addition, expression analysis indicated that <i<HvSADs</i< exhibit multiple tissue expression patterns in barley as well as different response characteristics under three abiotic stresses: salt, drought, and cold. Briefly, this evolutionary and expression analysis of <i<HvSADs</i< provides insight into the biological functions of barley, supporting a comprehensive analysis of the regulatory mechanisms of oil biosynthesis and metabolism in plants under abiotic stress.
abstract_unstemmed	Stearoyl-acyl carrier protein (ACP) Δ9 desaturase (SAD) is a critical fatty acid dehydrogenase in plants, playing a prominent role in regulating the synthesis of unsaturated fatty acids (UFAs) and having a significant impact on plant growth and development. In this study, we conducted a comprehensive genomic analysis of the SAD family in barley (<i<Hordeum vulgare</i< L.), identifying 14 HvSADs with the FA_desaturase_2 domain, which were divided into four subgroups based on sequence composition and phylogenetic analysis, with members of the same subgroup possessing similar genes and motif structures. Gene replication analysis suggested that tandem and segmental duplication may be the major reasons for the expansion of the <i<SAD</i< family in barley. The promoters of <i<HvSADs</i< contained various <i<cis</i<-regulatory elements (CREs) related to light, abscisic acid (ABA), and methyl jasmonate (MeJA). In addition, expression analysis indicated that <i<HvSADs</i< exhibit multiple tissue expression patterns in barley as well as different response characteristics under three abiotic stresses: salt, drought, and cold. Briefly, this evolutionary and expression analysis of <i<HvSADs</i< provides insight into the biological functions of barley, supporting a comprehensive analysis of the regulatory mechanisms of oil biosynthesis and metabolism in plants under abiotic stress.
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container_issue	1, p 113
title_short	Genome-Wide Identification and Expression Analysis of the Stearoyl-Acyl Carrier Protein Δ9 Desaturase Gene Family under Abiotic Stress in Barley
url	https://doi.org/10.3390/ijms25010113 https://doaj.org/article/f66b25839cf14eb18902c6da4a107399 https://www.mdpi.com/1422-0067/25/1/113 https://doaj.org/toc/1661-6596 https://doaj.org/toc/1422-0067
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