Unraveling the evolutionary dynamics of the TPS gene family in land plants

Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utiliza...
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Autor*in:	Xue-Mei Yan [verfasserIn] Shan-Shan Zhou [verfasserIn] Hui Liu [verfasserIn] Shi-Wei Zhao [verfasserIn] Xue-Chan Tian [verfasserIn] Tian-Le Shi [verfasserIn] Yu-Tao Bao [verfasserIn] Zhi-Chao Li [verfasserIn] Kai-Hua Jia [verfasserIn] Shuai Nie [verfasserIn] Jing-Fang Guo [verfasserIn] Lei Kong [verfasserIn] Ilga M. Porth [verfasserIn] Jian-Feng Mao [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2023

Schlagwörter:	terpene synthases horizontal gene transfer gene fusion synteny network biosynthetic gene clusters

Übergeordnetes Werk:	In: Frontiers in Plant Science - Frontiers Media S.A., 2011, 14(2023)
Übergeordnetes Werk:	volume:14 ; year:2023

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3389/fpls.2023.1273648

Katalog-ID:	DOAJ098301977

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allfields	10.3389/fpls.2023.1273648 doi (DE-627)DOAJ098301977 (DE-599)DOAJ2edf49e916bd490d92a12a354c2f929a DE-627 ger DE-627 rakwb eng SB1-1110 Xue-Mei Yan verfasserin aut Unraveling the evolutionary dynamics of the TPS gene family in land plants 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utilization value for oil-producing plants. Terpene synthases (TPSs) are important enzymes responsible for terpenic diversity. Investigating the differentiation of the TPS gene family could provide valuable theoretical support for the genetic improvement of oil-producing plants. While the origin and function of TPS genes have been extensively studied, the exact origin of the initial gene fusion event - it occurred in plants or microbes - remains uncertain. Furthermore, a comprehensive exploration of the TPS gene differentiation is still pending. Here, phylogenetic analysis revealed that the fusion of the TPS gene likely occurred in the ancestor of land plants, following the acquisition of individual C- and N- terminal domains. Potential mutual transfer of TPS genes was observed among microbes and plants. Gene synteny analysis disclosed a differential divergence pattern between TPS-c and TPS-e/f subfamilies involved in primary metabolism and those (TPS-a/b/d/g/h subfamilies) crucial for secondary metabolites. Biosynthetic gene clusters (BGCs) analysis suggested a correlation between lineage divergence and potential natural selection in structuring terpene diversities. This study provides fresh perspectives on the origin and evolution of the TPS gene family. terpene synthases horizontal gene transfer gene fusion synteny network biosynthetic gene clusters Plant culture Shan-Shan Zhou verfasserin aut Shan-Shan Zhou verfasserin aut Hui Liu verfasserin aut Shi-Wei Zhao verfasserin aut Xue-Chan Tian verfasserin aut Tian-Le Shi verfasserin aut Yu-Tao Bao verfasserin aut Zhi-Chao Li verfasserin aut Kai-Hua Jia verfasserin aut Kai-Hua Jia verfasserin aut Shuai Nie verfasserin aut Shuai Nie verfasserin aut Jing-Fang Guo verfasserin aut Jing-Fang Guo verfasserin aut Lei Kong verfasserin aut Lei Kong verfasserin aut Ilga M. Porth verfasserin aut Jian-Feng Mao verfasserin aut Jian-Feng Mao verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 14(2023) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:14 year:2023 https://doi.org/10.3389/fpls.2023.1273648 kostenfrei https://doaj.org/article/2edf49e916bd490d92a12a354c2f929a kostenfrei https://www.frontiersin.org/articles/10.3389/fpls.2023.1273648/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023
spelling	10.3389/fpls.2023.1273648 doi (DE-627)DOAJ098301977 (DE-599)DOAJ2edf49e916bd490d92a12a354c2f929a DE-627 ger DE-627 rakwb eng SB1-1110 Xue-Mei Yan verfasserin aut Unraveling the evolutionary dynamics of the TPS gene family in land plants 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utilization value for oil-producing plants. Terpene synthases (TPSs) are important enzymes responsible for terpenic diversity. Investigating the differentiation of the TPS gene family could provide valuable theoretical support for the genetic improvement of oil-producing plants. While the origin and function of TPS genes have been extensively studied, the exact origin of the initial gene fusion event - it occurred in plants or microbes - remains uncertain. Furthermore, a comprehensive exploration of the TPS gene differentiation is still pending. Here, phylogenetic analysis revealed that the fusion of the TPS gene likely occurred in the ancestor of land plants, following the acquisition of individual C- and N- terminal domains. Potential mutual transfer of TPS genes was observed among microbes and plants. Gene synteny analysis disclosed a differential divergence pattern between TPS-c and TPS-e/f subfamilies involved in primary metabolism and those (TPS-a/b/d/g/h subfamilies) crucial for secondary metabolites. Biosynthetic gene clusters (BGCs) analysis suggested a correlation between lineage divergence and potential natural selection in structuring terpene diversities. This study provides fresh perspectives on the origin and evolution of the TPS gene family. terpene synthases horizontal gene transfer gene fusion synteny network biosynthetic gene clusters Plant culture Shan-Shan Zhou verfasserin aut Shan-Shan Zhou verfasserin aut Hui Liu verfasserin aut Shi-Wei Zhao verfasserin aut Xue-Chan Tian verfasserin aut Tian-Le Shi verfasserin aut Yu-Tao Bao verfasserin aut Zhi-Chao Li verfasserin aut Kai-Hua Jia verfasserin aut Kai-Hua Jia verfasserin aut Shuai Nie verfasserin aut Shuai Nie verfasserin aut Jing-Fang Guo verfasserin aut Jing-Fang Guo verfasserin aut Lei Kong verfasserin aut Lei Kong verfasserin aut Ilga M. Porth verfasserin aut Jian-Feng Mao verfasserin aut Jian-Feng Mao verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 14(2023) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:14 year:2023 https://doi.org/10.3389/fpls.2023.1273648 kostenfrei https://doaj.org/article/2edf49e916bd490d92a12a354c2f929a kostenfrei https://www.frontiersin.org/articles/10.3389/fpls.2023.1273648/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023
allfields_unstemmed	10.3389/fpls.2023.1273648 doi (DE-627)DOAJ098301977 (DE-599)DOAJ2edf49e916bd490d92a12a354c2f929a DE-627 ger DE-627 rakwb eng SB1-1110 Xue-Mei Yan verfasserin aut Unraveling the evolutionary dynamics of the TPS gene family in land plants 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utilization value for oil-producing plants. Terpene synthases (TPSs) are important enzymes responsible for terpenic diversity. Investigating the differentiation of the TPS gene family could provide valuable theoretical support for the genetic improvement of oil-producing plants. While the origin and function of TPS genes have been extensively studied, the exact origin of the initial gene fusion event - it occurred in plants or microbes - remains uncertain. Furthermore, a comprehensive exploration of the TPS gene differentiation is still pending. Here, phylogenetic analysis revealed that the fusion of the TPS gene likely occurred in the ancestor of land plants, following the acquisition of individual C- and N- terminal domains. Potential mutual transfer of TPS genes was observed among microbes and plants. Gene synteny analysis disclosed a differential divergence pattern between TPS-c and TPS-e/f subfamilies involved in primary metabolism and those (TPS-a/b/d/g/h subfamilies) crucial for secondary metabolites. Biosynthetic gene clusters (BGCs) analysis suggested a correlation between lineage divergence and potential natural selection in structuring terpene diversities. This study provides fresh perspectives on the origin and evolution of the TPS gene family. terpene synthases horizontal gene transfer gene fusion synteny network biosynthetic gene clusters Plant culture Shan-Shan Zhou verfasserin aut Shan-Shan Zhou verfasserin aut Hui Liu verfasserin aut Shi-Wei Zhao verfasserin aut Xue-Chan Tian verfasserin aut Tian-Le Shi verfasserin aut Yu-Tao Bao verfasserin aut Zhi-Chao Li verfasserin aut Kai-Hua Jia verfasserin aut Kai-Hua Jia verfasserin aut Shuai Nie verfasserin aut Shuai Nie verfasserin aut Jing-Fang Guo verfasserin aut Jing-Fang Guo verfasserin aut Lei Kong verfasserin aut Lei Kong verfasserin aut Ilga M. Porth verfasserin aut Jian-Feng Mao verfasserin aut Jian-Feng Mao verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 14(2023) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:14 year:2023 https://doi.org/10.3389/fpls.2023.1273648 kostenfrei https://doaj.org/article/2edf49e916bd490d92a12a354c2f929a kostenfrei https://www.frontiersin.org/articles/10.3389/fpls.2023.1273648/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023
allfieldsGer	10.3389/fpls.2023.1273648 doi (DE-627)DOAJ098301977 (DE-599)DOAJ2edf49e916bd490d92a12a354c2f929a DE-627 ger DE-627 rakwb eng SB1-1110 Xue-Mei Yan verfasserin aut Unraveling the evolutionary dynamics of the TPS gene family in land plants 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utilization value for oil-producing plants. Terpene synthases (TPSs) are important enzymes responsible for terpenic diversity. Investigating the differentiation of the TPS gene family could provide valuable theoretical support for the genetic improvement of oil-producing plants. While the origin and function of TPS genes have been extensively studied, the exact origin of the initial gene fusion event - it occurred in plants or microbes - remains uncertain. Furthermore, a comprehensive exploration of the TPS gene differentiation is still pending. Here, phylogenetic analysis revealed that the fusion of the TPS gene likely occurred in the ancestor of land plants, following the acquisition of individual C- and N- terminal domains. Potential mutual transfer of TPS genes was observed among microbes and plants. Gene synteny analysis disclosed a differential divergence pattern between TPS-c and TPS-e/f subfamilies involved in primary metabolism and those (TPS-a/b/d/g/h subfamilies) crucial for secondary metabolites. Biosynthetic gene clusters (BGCs) analysis suggested a correlation between lineage divergence and potential natural selection in structuring terpene diversities. This study provides fresh perspectives on the origin and evolution of the TPS gene family. terpene synthases horizontal gene transfer gene fusion synteny network biosynthetic gene clusters Plant culture Shan-Shan Zhou verfasserin aut Shan-Shan Zhou verfasserin aut Hui Liu verfasserin aut Shi-Wei Zhao verfasserin aut Xue-Chan Tian verfasserin aut Tian-Le Shi verfasserin aut Yu-Tao Bao verfasserin aut Zhi-Chao Li verfasserin aut Kai-Hua Jia verfasserin aut Kai-Hua Jia verfasserin aut Shuai Nie verfasserin aut Shuai Nie verfasserin aut Jing-Fang Guo verfasserin aut Jing-Fang Guo verfasserin aut Lei Kong verfasserin aut Lei Kong verfasserin aut Ilga M. Porth verfasserin aut Jian-Feng Mao verfasserin aut Jian-Feng Mao verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 14(2023) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:14 year:2023 https://doi.org/10.3389/fpls.2023.1273648 kostenfrei https://doaj.org/article/2edf49e916bd490d92a12a354c2f929a kostenfrei https://www.frontiersin.org/articles/10.3389/fpls.2023.1273648/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023
allfieldsSound	10.3389/fpls.2023.1273648 doi (DE-627)DOAJ098301977 (DE-599)DOAJ2edf49e916bd490d92a12a354c2f929a DE-627 ger DE-627 rakwb eng SB1-1110 Xue-Mei Yan verfasserin aut Unraveling the evolutionary dynamics of the TPS gene family in land plants 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utilization value for oil-producing plants. Terpene synthases (TPSs) are important enzymes responsible for terpenic diversity. Investigating the differentiation of the TPS gene family could provide valuable theoretical support for the genetic improvement of oil-producing plants. While the origin and function of TPS genes have been extensively studied, the exact origin of the initial gene fusion event - it occurred in plants or microbes - remains uncertain. Furthermore, a comprehensive exploration of the TPS gene differentiation is still pending. Here, phylogenetic analysis revealed that the fusion of the TPS gene likely occurred in the ancestor of land plants, following the acquisition of individual C- and N- terminal domains. Potential mutual transfer of TPS genes was observed among microbes and plants. Gene synteny analysis disclosed a differential divergence pattern between TPS-c and TPS-e/f subfamilies involved in primary metabolism and those (TPS-a/b/d/g/h subfamilies) crucial for secondary metabolites. Biosynthetic gene clusters (BGCs) analysis suggested a correlation between lineage divergence and potential natural selection in structuring terpene diversities. This study provides fresh perspectives on the origin and evolution of the TPS gene family. terpene synthases horizontal gene transfer gene fusion synteny network biosynthetic gene clusters Plant culture Shan-Shan Zhou verfasserin aut Shan-Shan Zhou verfasserin aut Hui Liu verfasserin aut Shi-Wei Zhao verfasserin aut Xue-Chan Tian verfasserin aut Tian-Le Shi verfasserin aut Yu-Tao Bao verfasserin aut Zhi-Chao Li verfasserin aut Kai-Hua Jia verfasserin aut Kai-Hua Jia verfasserin aut Shuai Nie verfasserin aut Shuai Nie verfasserin aut Jing-Fang Guo verfasserin aut Jing-Fang Guo verfasserin aut Lei Kong verfasserin aut Lei Kong verfasserin aut Ilga M. Porth verfasserin aut Jian-Feng Mao verfasserin aut Jian-Feng Mao verfasserin aut In Frontiers in Plant Science Frontiers Media S.A., 2011 14(2023) (DE-627)662359240 (DE-600)2613694-6 1664462X nnns volume:14 year:2023 https://doi.org/10.3389/fpls.2023.1273648 kostenfrei https://doaj.org/article/2edf49e916bd490d92a12a354c2f929a kostenfrei https://www.frontiersin.org/articles/10.3389/fpls.2023.1273648/full kostenfrei https://doaj.org/toc/1664-462X Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023
language	English
source	In Frontiers in Plant Science 14(2023) volume:14 year:2023
sourceStr	In Frontiers in Plant Science 14(2023) volume:14 year:2023
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	terpene synthases horizontal gene transfer gene fusion synteny network biosynthetic gene clusters Plant culture
isfreeaccess_bool	true
container_title	Frontiers in Plant Science
authorswithroles_txt_mv	Xue-Mei Yan @@aut@@ Shan-Shan Zhou @@aut@@ Hui Liu @@aut@@ Shi-Wei Zhao @@aut@@ Xue-Chan Tian @@aut@@ Tian-Le Shi @@aut@@ Yu-Tao Bao @@aut@@ Zhi-Chao Li @@aut@@ Kai-Hua Jia @@aut@@ Shuai Nie @@aut@@ Jing-Fang Guo @@aut@@ Lei Kong @@aut@@ Ilga M. Porth @@aut@@ Jian-Feng Mao @@aut@@
publishDateDaySort_date	2023-01-01T00:00:00Z
hierarchy_top_id	662359240
id	DOAJ098301977
language_de	englisch
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callnumber-first	S - Agriculture
author	Xue-Mei Yan
spellingShingle	Xue-Mei Yan misc SB1-1110 misc terpene synthases misc horizontal gene transfer misc gene fusion misc synteny network misc biosynthetic gene clusters misc Plant culture Unraveling the evolutionary dynamics of the TPS gene family in land plants
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topic_title	SB1-1110 Unraveling the evolutionary dynamics of the TPS gene family in land plants terpene synthases horizontal gene transfer gene fusion synteny network biosynthetic gene clusters
topic	misc SB1-1110 misc terpene synthases misc horizontal gene transfer misc gene fusion misc synteny network misc biosynthetic gene clusters misc Plant culture
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title	Unraveling the evolutionary dynamics of the TPS gene family in land plants
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title_full	Unraveling the evolutionary dynamics of the TPS gene family in land plants
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author_browse	Xue-Mei Yan Shan-Shan Zhou Hui Liu Shi-Wei Zhao Xue-Chan Tian Tian-Le Shi Yu-Tao Bao Zhi-Chao Li Kai-Hua Jia Shuai Nie Jing-Fang Guo Lei Kong Ilga M. Porth Jian-Feng Mao
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title_sort	unraveling the evolutionary dynamics of the tps gene family in land plants
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title_auth	Unraveling the evolutionary dynamics of the TPS gene family in land plants
abstract	Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utilization value for oil-producing plants. Terpene synthases (TPSs) are important enzymes responsible for terpenic diversity. Investigating the differentiation of the TPS gene family could provide valuable theoretical support for the genetic improvement of oil-producing plants. While the origin and function of TPS genes have been extensively studied, the exact origin of the initial gene fusion event - it occurred in plants or microbes - remains uncertain. Furthermore, a comprehensive exploration of the TPS gene differentiation is still pending. Here, phylogenetic analysis revealed that the fusion of the TPS gene likely occurred in the ancestor of land plants, following the acquisition of individual C- and N- terminal domains. Potential mutual transfer of TPS genes was observed among microbes and plants. Gene synteny analysis disclosed a differential divergence pattern between TPS-c and TPS-e/f subfamilies involved in primary metabolism and those (TPS-a/b/d/g/h subfamilies) crucial for secondary metabolites. Biosynthetic gene clusters (BGCs) analysis suggested a correlation between lineage divergence and potential natural selection in structuring terpene diversities. This study provides fresh perspectives on the origin and evolution of the TPS gene family.
abstractGer	Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utilization value for oil-producing plants. Terpene synthases (TPSs) are important enzymes responsible for terpenic diversity. Investigating the differentiation of the TPS gene family could provide valuable theoretical support for the genetic improvement of oil-producing plants. While the origin and function of TPS genes have been extensively studied, the exact origin of the initial gene fusion event - it occurred in plants or microbes - remains uncertain. Furthermore, a comprehensive exploration of the TPS gene differentiation is still pending. Here, phylogenetic analysis revealed that the fusion of the TPS gene likely occurred in the ancestor of land plants, following the acquisition of individual C- and N- terminal domains. Potential mutual transfer of TPS genes was observed among microbes and plants. Gene synteny analysis disclosed a differential divergence pattern between TPS-c and TPS-e/f subfamilies involved in primary metabolism and those (TPS-a/b/d/g/h subfamilies) crucial for secondary metabolites. Biosynthetic gene clusters (BGCs) analysis suggested a correlation between lineage divergence and potential natural selection in structuring terpene diversities. This study provides fresh perspectives on the origin and evolution of the TPS gene family.
abstract_unstemmed	Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utilization value for oil-producing plants. Terpene synthases (TPSs) are important enzymes responsible for terpenic diversity. Investigating the differentiation of the TPS gene family could provide valuable theoretical support for the genetic improvement of oil-producing plants. While the origin and function of TPS genes have been extensively studied, the exact origin of the initial gene fusion event - it occurred in plants or microbes - remains uncertain. Furthermore, a comprehensive exploration of the TPS gene differentiation is still pending. Here, phylogenetic analysis revealed that the fusion of the TPS gene likely occurred in the ancestor of land plants, following the acquisition of individual C- and N- terminal domains. Potential mutual transfer of TPS genes was observed among microbes and plants. Gene synteny analysis disclosed a differential divergence pattern between TPS-c and TPS-e/f subfamilies involved in primary metabolism and those (TPS-a/b/d/g/h subfamilies) crucial for secondary metabolites. Biosynthetic gene clusters (BGCs) analysis suggested a correlation between lineage divergence and potential natural selection in structuring terpene diversities. This study provides fresh perspectives on the origin and evolution of the TPS gene family.
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title_short	Unraveling the evolutionary dynamics of the TPS gene family in land plants
url	https://doi.org/10.3389/fpls.2023.1273648 https://doaj.org/article/2edf49e916bd490d92a12a354c2f929a https://www.frontiersin.org/articles/10.3389/fpls.2023.1273648/full https://doaj.org/toc/1664-462X
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Unraveling the evolutionary dynamics of the TPS gene family in land plants

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