Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations
Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leav...
Ausführliche Beschreibung
Autor*in: |
Maja Popović [verfasserIn] Ida Katičić Bogdan [verfasserIn] Filip Varga [verfasserIn] Zlatko Šatović [verfasserIn] Saša Bogdan [verfasserIn] Mladen Ivanković [verfasserIn] |
---|
Format: |
E-Artikel |
---|---|
Sprache: |
Englisch |
Erschienen: |
2023 |
---|
Schlagwörter: |
---|
Übergeordnetes Werk: |
In: Forests - MDPI AG, 2010, 14(2023), 12, p 2290 |
---|---|
Übergeordnetes Werk: |
volume:14 ; year:2023 ; number:12, p 2290 |
Links: |
---|
DOI / URN: |
10.3390/f14122290 |
---|
Katalog-ID: |
DOAJ098870351 |
---|
LEADER | 01000naa a22002652 4500 | ||
---|---|---|---|
001 | DOAJ098870351 | ||
003 | DE-627 | ||
005 | 20240414003828.0 | ||
007 | cr uuu---uuuuu | ||
008 | 240414s2023 xx |||||o 00| ||eng c | ||
024 | 7 | |a 10.3390/f14122290 |2 doi | |
035 | |a (DE-627)DOAJ098870351 | ||
035 | |a (DE-599)DOAJ4154b8072d944bdc8e1480afb6efcacf | ||
040 | |a DE-627 |b ger |c DE-627 |e rakwb | ||
041 | |a eng | ||
050 | 0 | |a QK900-989 | |
100 | 0 | |a Maja Popović |e verfasserin |4 aut | |
245 | 1 | 0 | |a Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations |
264 | 1 | |c 2023 | |
336 | |a Text |b txt |2 rdacontent | ||
337 | |a Computermedien |b c |2 rdamedia | ||
338 | |a Online-Ressource |b cr |2 rdacarrier | ||
520 | |a Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow. | ||
650 | 4 | |a peripheral populations | |
650 | 4 | |a nSSRs | |
650 | 4 | |a cpSSRs | |
650 | 4 | |a inbreeding | |
650 | 4 | |a differentiation | |
650 | 4 | |a diversity hotspot | |
653 | 0 | |a Plant ecology | |
700 | 0 | |a Ida Katičić Bogdan |e verfasserin |4 aut | |
700 | 0 | |a Filip Varga |e verfasserin |4 aut | |
700 | 0 | |a Zlatko Šatović |e verfasserin |4 aut | |
700 | 0 | |a Saša Bogdan |e verfasserin |4 aut | |
700 | 0 | |a Mladen Ivanković |e verfasserin |4 aut | |
773 | 0 | 8 | |i In |t Forests |d MDPI AG, 2010 |g 14(2023), 12, p 2290 |w (DE-627)614095689 |w (DE-600)2527081-3 |x 19994907 |7 nnns |
773 | 1 | 8 | |g volume:14 |g year:2023 |g number:12, p 2290 |
856 | 4 | 0 | |u https://doi.org/10.3390/f14122290 |z kostenfrei |
856 | 4 | 0 | |u https://doaj.org/article/4154b8072d944bdc8e1480afb6efcacf |z kostenfrei |
856 | 4 | 0 | |u https://www.mdpi.com/1999-4907/14/12/2290 |z kostenfrei |
856 | 4 | 2 | |u https://doaj.org/toc/1999-4907 |y Journal toc |z kostenfrei |
912 | |a GBV_USEFLAG_A | ||
912 | |a SYSFLAG_A | ||
912 | |a GBV_DOAJ | ||
912 | |a GBV_ILN_20 | ||
912 | |a GBV_ILN_22 | ||
912 | |a GBV_ILN_23 | ||
912 | |a GBV_ILN_24 | ||
912 | |a GBV_ILN_39 | ||
912 | |a GBV_ILN_40 | ||
912 | |a GBV_ILN_60 | ||
912 | |a GBV_ILN_62 | ||
912 | |a GBV_ILN_63 | ||
912 | |a GBV_ILN_65 | ||
912 | |a GBV_ILN_69 | ||
912 | |a GBV_ILN_70 | ||
912 | |a GBV_ILN_73 | ||
912 | |a GBV_ILN_95 | ||
912 | |a GBV_ILN_105 | ||
912 | |a GBV_ILN_110 | ||
912 | |a GBV_ILN_151 | ||
912 | |a GBV_ILN_161 | ||
912 | |a GBV_ILN_170 | ||
912 | |a GBV_ILN_213 | ||
912 | |a GBV_ILN_230 | ||
912 | |a GBV_ILN_285 | ||
912 | |a GBV_ILN_293 | ||
912 | |a GBV_ILN_370 | ||
912 | |a GBV_ILN_602 | ||
912 | |a GBV_ILN_2014 | ||
912 | |a GBV_ILN_2147 | ||
912 | |a GBV_ILN_2148 | ||
912 | |a GBV_ILN_4012 | ||
912 | |a GBV_ILN_4037 | ||
912 | |a GBV_ILN_4112 | ||
912 | |a GBV_ILN_4125 | ||
912 | |a GBV_ILN_4126 | ||
912 | |a GBV_ILN_4249 | ||
912 | |a GBV_ILN_4305 | ||
912 | |a GBV_ILN_4306 | ||
912 | |a GBV_ILN_4307 | ||
912 | |a GBV_ILN_4313 | ||
912 | |a GBV_ILN_4322 | ||
912 | |a GBV_ILN_4323 | ||
912 | |a GBV_ILN_4324 | ||
912 | |a GBV_ILN_4325 | ||
912 | |a GBV_ILN_4367 | ||
912 | |a GBV_ILN_4700 | ||
951 | |a AR | ||
952 | |d 14 |j 2023 |e 12, p 2290 |
author_variant |
m p mp i k b ikb f v fv z š zš s b sb m i mi |
---|---|
matchkey_str |
article:19994907:2023----::eeidvriyneihrleucltokqecsouipoeacsoetaciaehneiiaosnhcneodsrb |
hierarchy_sort_str |
2023 |
callnumber-subject-code |
QK |
publishDate |
2023 |
allfields |
10.3390/f14122290 doi (DE-627)DOAJ098870351 (DE-599)DOAJ4154b8072d944bdc8e1480afb6efcacf DE-627 ger DE-627 rakwb eng QK900-989 Maja Popović verfasserin aut Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow. peripheral populations nSSRs cpSSRs inbreeding differentiation diversity hotspot Plant ecology Ida Katičić Bogdan verfasserin aut Filip Varga verfasserin aut Zlatko Šatović verfasserin aut Saša Bogdan verfasserin aut Mladen Ivanković verfasserin aut In Forests MDPI AG, 2010 14(2023), 12, p 2290 (DE-627)614095689 (DE-600)2527081-3 19994907 nnns volume:14 year:2023 number:12, p 2290 https://doi.org/10.3390/f14122290 kostenfrei https://doaj.org/article/4154b8072d944bdc8e1480afb6efcacf kostenfrei https://www.mdpi.com/1999-4907/14/12/2290 kostenfrei https://doaj.org/toc/1999-4907 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023 12, p 2290 |
spelling |
10.3390/f14122290 doi (DE-627)DOAJ098870351 (DE-599)DOAJ4154b8072d944bdc8e1480afb6efcacf DE-627 ger DE-627 rakwb eng QK900-989 Maja Popović verfasserin aut Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow. peripheral populations nSSRs cpSSRs inbreeding differentiation diversity hotspot Plant ecology Ida Katičić Bogdan verfasserin aut Filip Varga verfasserin aut Zlatko Šatović verfasserin aut Saša Bogdan verfasserin aut Mladen Ivanković verfasserin aut In Forests MDPI AG, 2010 14(2023), 12, p 2290 (DE-627)614095689 (DE-600)2527081-3 19994907 nnns volume:14 year:2023 number:12, p 2290 https://doi.org/10.3390/f14122290 kostenfrei https://doaj.org/article/4154b8072d944bdc8e1480afb6efcacf kostenfrei https://www.mdpi.com/1999-4907/14/12/2290 kostenfrei https://doaj.org/toc/1999-4907 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023 12, p 2290 |
allfields_unstemmed |
10.3390/f14122290 doi (DE-627)DOAJ098870351 (DE-599)DOAJ4154b8072d944bdc8e1480afb6efcacf DE-627 ger DE-627 rakwb eng QK900-989 Maja Popović verfasserin aut Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow. peripheral populations nSSRs cpSSRs inbreeding differentiation diversity hotspot Plant ecology Ida Katičić Bogdan verfasserin aut Filip Varga verfasserin aut Zlatko Šatović verfasserin aut Saša Bogdan verfasserin aut Mladen Ivanković verfasserin aut In Forests MDPI AG, 2010 14(2023), 12, p 2290 (DE-627)614095689 (DE-600)2527081-3 19994907 nnns volume:14 year:2023 number:12, p 2290 https://doi.org/10.3390/f14122290 kostenfrei https://doaj.org/article/4154b8072d944bdc8e1480afb6efcacf kostenfrei https://www.mdpi.com/1999-4907/14/12/2290 kostenfrei https://doaj.org/toc/1999-4907 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023 12, p 2290 |
allfieldsGer |
10.3390/f14122290 doi (DE-627)DOAJ098870351 (DE-599)DOAJ4154b8072d944bdc8e1480afb6efcacf DE-627 ger DE-627 rakwb eng QK900-989 Maja Popović verfasserin aut Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow. peripheral populations nSSRs cpSSRs inbreeding differentiation diversity hotspot Plant ecology Ida Katičić Bogdan verfasserin aut Filip Varga verfasserin aut Zlatko Šatović verfasserin aut Saša Bogdan verfasserin aut Mladen Ivanković verfasserin aut In Forests MDPI AG, 2010 14(2023), 12, p 2290 (DE-627)614095689 (DE-600)2527081-3 19994907 nnns volume:14 year:2023 number:12, p 2290 https://doi.org/10.3390/f14122290 kostenfrei https://doaj.org/article/4154b8072d944bdc8e1480afb6efcacf kostenfrei https://www.mdpi.com/1999-4907/14/12/2290 kostenfrei https://doaj.org/toc/1999-4907 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023 12, p 2290 |
allfieldsSound |
10.3390/f14122290 doi (DE-627)DOAJ098870351 (DE-599)DOAJ4154b8072d944bdc8e1480afb6efcacf DE-627 ger DE-627 rakwb eng QK900-989 Maja Popović verfasserin aut Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations 2023 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow. peripheral populations nSSRs cpSSRs inbreeding differentiation diversity hotspot Plant ecology Ida Katičić Bogdan verfasserin aut Filip Varga verfasserin aut Zlatko Šatović verfasserin aut Saša Bogdan verfasserin aut Mladen Ivanković verfasserin aut In Forests MDPI AG, 2010 14(2023), 12, p 2290 (DE-627)614095689 (DE-600)2527081-3 19994907 nnns volume:14 year:2023 number:12, p 2290 https://doi.org/10.3390/f14122290 kostenfrei https://doaj.org/article/4154b8072d944bdc8e1480afb6efcacf kostenfrei https://www.mdpi.com/1999-4907/14/12/2290 kostenfrei https://doaj.org/toc/1999-4907 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 14 2023 12, p 2290 |
language |
English |
source |
In Forests 14(2023), 12, p 2290 volume:14 year:2023 number:12, p 2290 |
sourceStr |
In Forests 14(2023), 12, p 2290 volume:14 year:2023 number:12, p 2290 |
format_phy_str_mv |
Article |
institution |
findex.gbv.de |
topic_facet |
peripheral populations nSSRs cpSSRs inbreeding differentiation diversity hotspot Plant ecology |
isfreeaccess_bool |
true |
container_title |
Forests |
authorswithroles_txt_mv |
Maja Popović @@aut@@ Ida Katičić Bogdan @@aut@@ Filip Varga @@aut@@ Zlatko Šatović @@aut@@ Saša Bogdan @@aut@@ Mladen Ivanković @@aut@@ |
publishDateDaySort_date |
2023-01-01T00:00:00Z |
hierarchy_top_id |
614095689 |
id |
DOAJ098870351 |
language_de |
englisch |
fullrecord |
<?xml version="1.0" encoding="UTF-8"?><collection xmlns="http://www.loc.gov/MARC21/slim"><record><leader>01000naa a22002652 4500</leader><controlfield tag="001">DOAJ098870351</controlfield><controlfield tag="003">DE-627</controlfield><controlfield tag="005">20240414003828.0</controlfield><controlfield tag="007">cr uuu---uuuuu</controlfield><controlfield tag="008">240414s2023 xx |||||o 00| ||eng c</controlfield><datafield tag="024" ind1="7" ind2=" "><subfield code="a">10.3390/f14122290</subfield><subfield code="2">doi</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(DE-627)DOAJ098870351</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(DE-599)DOAJ4154b8072d944bdc8e1480afb6efcacf</subfield></datafield><datafield tag="040" ind1=" " ind2=" "><subfield code="a">DE-627</subfield><subfield code="b">ger</subfield><subfield code="c">DE-627</subfield><subfield code="e">rakwb</subfield></datafield><datafield tag="041" ind1=" " ind2=" "><subfield code="a">eng</subfield></datafield><datafield tag="050" ind1=" " ind2="0"><subfield code="a">QK900-989</subfield></datafield><datafield tag="100" ind1="0" ind2=" "><subfield code="a">Maja Popović</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="245" ind1="1" ind2="0"><subfield code="a">Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations</subfield></datafield><datafield tag="264" ind1=" " ind2="1"><subfield code="c">2023</subfield></datafield><datafield tag="336" ind1=" " ind2=" "><subfield code="a">Text</subfield><subfield code="b">txt</subfield><subfield code="2">rdacontent</subfield></datafield><datafield tag="337" ind1=" " ind2=" "><subfield code="a">Computermedien</subfield><subfield code="b">c</subfield><subfield code="2">rdamedia</subfield></datafield><datafield tag="338" ind1=" " ind2=" "><subfield code="a">Online-Ressource</subfield><subfield code="b">cr</subfield><subfield code="2">rdacarrier</subfield></datafield><datafield tag="520" ind1=" " ind2=" "><subfield code="a">Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow.</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">peripheral populations</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">nSSRs</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">cpSSRs</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">inbreeding</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">differentiation</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">diversity hotspot</subfield></datafield><datafield tag="653" ind1=" " ind2="0"><subfield code="a">Plant ecology</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Ida Katičić Bogdan</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Filip Varga</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Zlatko Šatović</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Saša Bogdan</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Mladen Ivanković</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="773" ind1="0" ind2="8"><subfield code="i">In</subfield><subfield code="t">Forests</subfield><subfield code="d">MDPI AG, 2010</subfield><subfield code="g">14(2023), 12, p 2290</subfield><subfield code="w">(DE-627)614095689</subfield><subfield code="w">(DE-600)2527081-3</subfield><subfield code="x">19994907</subfield><subfield code="7">nnns</subfield></datafield><datafield tag="773" ind1="1" ind2="8"><subfield code="g">volume:14</subfield><subfield code="g">year:2023</subfield><subfield code="g">number:12, p 2290</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://doi.org/10.3390/f14122290</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://doaj.org/article/4154b8072d944bdc8e1480afb6efcacf</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://www.mdpi.com/1999-4907/14/12/2290</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="2"><subfield code="u">https://doaj.org/toc/1999-4907</subfield><subfield code="y">Journal toc</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_USEFLAG_A</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">SYSFLAG_A</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_DOAJ</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_20</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_22</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_23</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_24</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_39</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_40</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_60</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_62</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_63</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_65</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_69</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_70</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_73</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_95</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_105</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_110</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_151</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_161</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_170</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_213</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_230</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_285</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_293</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_370</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_602</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_2014</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_2147</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_2148</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4012</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4037</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4112</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4125</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4126</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4249</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4305</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4306</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4307</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4313</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4322</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4323</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4324</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4325</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4367</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4700</subfield></datafield><datafield tag="951" ind1=" " ind2=" "><subfield code="a">AR</subfield></datafield><datafield tag="952" ind1=" " ind2=" "><subfield code="d">14</subfield><subfield code="j">2023</subfield><subfield code="e">12, p 2290</subfield></datafield></record></collection>
|
callnumber-first |
Q - Science |
author |
Maja Popović |
spellingShingle |
Maja Popović misc QK900-989 misc peripheral populations misc nSSRs misc cpSSRs misc inbreeding misc differentiation misc diversity hotspot misc Plant ecology Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations |
authorStr |
Maja Popović |
ppnlink_with_tag_str_mv |
@@773@@(DE-627)614095689 |
format |
electronic Article |
delete_txt_mv |
keep |
author_role |
aut aut aut aut aut aut |
collection |
DOAJ |
remote_str |
true |
callnumber-label |
QK900-989 |
illustrated |
Not Illustrated |
issn |
19994907 |
topic_title |
QK900-989 Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations peripheral populations nSSRs cpSSRs inbreeding differentiation diversity hotspot |
topic |
misc QK900-989 misc peripheral populations misc nSSRs misc cpSSRs misc inbreeding misc differentiation misc diversity hotspot misc Plant ecology |
topic_unstemmed |
misc QK900-989 misc peripheral populations misc nSSRs misc cpSSRs misc inbreeding misc differentiation misc diversity hotspot misc Plant ecology |
topic_browse |
misc QK900-989 misc peripheral populations misc nSSRs misc cpSSRs misc inbreeding misc differentiation misc diversity hotspot misc Plant ecology |
format_facet |
Elektronische Aufsätze Aufsätze Elektronische Ressource |
format_main_str_mv |
Text Zeitschrift/Artikel |
carriertype_str_mv |
cr |
hierarchy_parent_title |
Forests |
hierarchy_parent_id |
614095689 |
hierarchy_top_title |
Forests |
isfreeaccess_txt |
true |
familylinks_str_mv |
(DE-627)614095689 (DE-600)2527081-3 |
title |
Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations |
ctrlnum |
(DE-627)DOAJ098870351 (DE-599)DOAJ4154b8072d944bdc8e1480afb6efcacf |
title_full |
Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations |
author_sort |
Maja Popović |
journal |
Forests |
journalStr |
Forests |
callnumber-first-code |
Q |
lang_code |
eng |
isOA_bool |
true |
recordtype |
marc |
publishDateSort |
2023 |
contenttype_str_mv |
txt |
author_browse |
Maja Popović Ida Katičić Bogdan Filip Varga Zlatko Šatović Saša Bogdan Mladen Ivanković |
container_volume |
14 |
class |
QK900-989 |
format_se |
Elektronische Aufsätze |
author-letter |
Maja Popović |
doi_str_mv |
10.3390/f14122290 |
author2-role |
verfasserin |
title_sort |
genetic diversity in peripheral pedunculate oak (<i<quercus robur</i< l.) provenances—potential climate change mitigators in the center of distribution despite challenges in natural populations |
callnumber |
QK900-989 |
title_auth |
Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations |
abstract |
Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow. |
abstractGer |
Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow. |
abstract_unstemmed |
Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow. |
collection_details |
GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 |
container_issue |
12, p 2290 |
title_short |
Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations |
url |
https://doi.org/10.3390/f14122290 https://doaj.org/article/4154b8072d944bdc8e1480afb6efcacf https://www.mdpi.com/1999-4907/14/12/2290 https://doaj.org/toc/1999-4907 |
remote_bool |
true |
author2 |
Ida Katičić Bogdan Filip Varga Zlatko Šatović Saša Bogdan Mladen Ivanković |
author2Str |
Ida Katičić Bogdan Filip Varga Zlatko Šatović Saša Bogdan Mladen Ivanković |
ppnlink |
614095689 |
callnumber-subject |
QK - Botany |
mediatype_str_mv |
c |
isOA_txt |
true |
hochschulschrift_bool |
false |
doi_str |
10.3390/f14122290 |
callnumber-a |
QK900-989 |
up_date |
2024-07-03T19:42:13.087Z |
_version_ |
1803588188859531264 |
fullrecord_marcxml |
<?xml version="1.0" encoding="UTF-8"?><collection xmlns="http://www.loc.gov/MARC21/slim"><record><leader>01000naa a22002652 4500</leader><controlfield tag="001">DOAJ098870351</controlfield><controlfield tag="003">DE-627</controlfield><controlfield tag="005">20240414003828.0</controlfield><controlfield tag="007">cr uuu---uuuuu</controlfield><controlfield tag="008">240414s2023 xx |||||o 00| ||eng c</controlfield><datafield tag="024" ind1="7" ind2=" "><subfield code="a">10.3390/f14122290</subfield><subfield code="2">doi</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(DE-627)DOAJ098870351</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(DE-599)DOAJ4154b8072d944bdc8e1480afb6efcacf</subfield></datafield><datafield tag="040" ind1=" " ind2=" "><subfield code="a">DE-627</subfield><subfield code="b">ger</subfield><subfield code="c">DE-627</subfield><subfield code="e">rakwb</subfield></datafield><datafield tag="041" ind1=" " ind2=" "><subfield code="a">eng</subfield></datafield><datafield tag="050" ind1=" " ind2="0"><subfield code="a">QK900-989</subfield></datafield><datafield tag="100" ind1="0" ind2=" "><subfield code="a">Maja Popović</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="245" ind1="1" ind2="0"><subfield code="a">Genetic Diversity in Peripheral Pedunculate Oak (<i<Quercus robur</i< L.) Provenances—Potential Climate Change Mitigators in the Center of Distribution despite Challenges in Natural Populations</subfield></datafield><datafield tag="264" ind1=" " ind2="1"><subfield code="c">2023</subfield></datafield><datafield tag="336" ind1=" " ind2=" "><subfield code="a">Text</subfield><subfield code="b">txt</subfield><subfield code="2">rdacontent</subfield></datafield><datafield tag="337" ind1=" " ind2=" "><subfield code="a">Computermedien</subfield><subfield code="b">c</subfield><subfield code="2">rdamedia</subfield></datafield><datafield tag="338" ind1=" " ind2=" "><subfield code="a">Online-Ressource</subfield><subfield code="b">cr</subfield><subfield code="2">rdacarrier</subfield></datafield><datafield tag="520" ind1=" " ind2=" "><subfield code="a">Croatian pedunculate oak (<i<Quercus robur</i< L.) populations represent southern range peripheral populations, often viewed as sources of valuable diversity and drought-resistant ecotypes. At the same time, they endure stronger selection pressures as a result of climate change. The leaves of 20 individuals per population (17) were sampled in a field trial and analyzed using 10 nuclear and 9 chloroplast SSRs to determine the level of intrapopulation genetic variability and genetic differentiation. Analysis with nSSRs revealed deviation from HWE in seven populations. AMOVA showed a high intra-population diversity (98.53%) and a small but statistically significant inter-population differentiation. Isolation by distance explained 19.6% of differentiation. Average <i<F<sub<ST</sub<</i< between populations was low (0.013) compared with usual values for peripheral populations. Populations were rich in cpSSR haplotypes, confirming the hotspot of diversity caused by the encounter of recolonization routes. Unbiased haplotype diversity (<i<H<sub<E</sub<</i<) from 9 chloroplast SSRs and 325 individuals was (<i<H<sub<E</sub<</i< = 0.440). Sixty-six different haplotypes were grouped in three maternal lineages by both a median-joining network and a neighbor-joining algorithm. AMOVA for cpSSRs showed statistically significant diversity among populations (70.23%), suggesting genetic differentiation, but also a probable anthropogenic effect. AMOVA of nSSRs within and between lineages showed that original recolonization patterns of nuclear diversity were subsequently erased by gene flow.</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">peripheral populations</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">nSSRs</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">cpSSRs</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">inbreeding</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">differentiation</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">diversity hotspot</subfield></datafield><datafield tag="653" ind1=" " ind2="0"><subfield code="a">Plant ecology</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Ida Katičić Bogdan</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Filip Varga</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Zlatko Šatović</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Saša Bogdan</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="0" ind2=" "><subfield code="a">Mladen Ivanković</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="773" ind1="0" ind2="8"><subfield code="i">In</subfield><subfield code="t">Forests</subfield><subfield code="d">MDPI AG, 2010</subfield><subfield code="g">14(2023), 12, p 2290</subfield><subfield code="w">(DE-627)614095689</subfield><subfield code="w">(DE-600)2527081-3</subfield><subfield code="x">19994907</subfield><subfield code="7">nnns</subfield></datafield><datafield tag="773" ind1="1" ind2="8"><subfield code="g">volume:14</subfield><subfield code="g">year:2023</subfield><subfield code="g">number:12, p 2290</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://doi.org/10.3390/f14122290</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://doaj.org/article/4154b8072d944bdc8e1480afb6efcacf</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://www.mdpi.com/1999-4907/14/12/2290</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="856" ind1="4" ind2="2"><subfield code="u">https://doaj.org/toc/1999-4907</subfield><subfield code="y">Journal toc</subfield><subfield code="z">kostenfrei</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_USEFLAG_A</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">SYSFLAG_A</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_DOAJ</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_20</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_22</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_23</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_24</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_39</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_40</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_60</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_62</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_63</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_65</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_69</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_70</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_73</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_95</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_105</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_110</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_151</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_161</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_170</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_213</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_230</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_285</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_293</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_370</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_602</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_2014</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_2147</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_2148</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4012</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4037</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4112</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4125</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4126</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4249</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4305</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4306</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4307</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4313</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4322</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4323</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4324</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4325</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4367</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ILN_4700</subfield></datafield><datafield tag="951" ind1=" " ind2=" "><subfield code="a">AR</subfield></datafield><datafield tag="952" ind1=" " ind2=" "><subfield code="d">14</subfield><subfield code="j">2023</subfield><subfield code="e">12, p 2290</subfield></datafield></record></collection>
|
score |
7.400321 |