Identification and profiling of microRNAs in the ovaries of polytocous and monotocous goats during estrus
MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformati...
Ausführliche Beschreibung
Gespeichert in:
| Autor*in: |
An, Xiaopeng [verfasserIn] |
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| Format: |
E-Artikel |
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| Sprache: |
Englisch |
| Erschienen: |
2016transfer abstract |
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| Schlagwörter: |
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| Umfang: |
12 |
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| Übergeordnetes Werk: |
Enthalten in: Multi-source monitoring information fusion method for dam health diagnosis based on Wasserstein distance - Chen, Anyi ELSEVIER, 2023, an international journal of animal reproduction, Amsterdam [u.a.] |
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| Übergeordnetes Werk: |
volume:85 ; year:2016 ; number:4 ; day:1 ; month:03 ; pages:769-780 ; extent:12 |
| Links: |
|---|
| DOI / URN: |
10.1016/j.theriogenology.2015.09.056 |
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| 245 | 1 | 0 | |a Identification and profiling of microRNAs in the ovaries of polytocous and monotocous goats during estrus |
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| 520 | |a MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. | ||
| 520 | |a MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. | ||
| 650 | 7 | |a Ovary |2 Elsevier | |
| 650 | 7 | |a MicroRNA |2 Elsevier | |
| 650 | 7 | |a Solexa sequencing |2 Elsevier | |
| 650 | 7 | |a Goat |2 Elsevier | |
| 700 | 1 | |a Song, Yuxuan |4 oth | |
| 700 | 1 | |a Hou, Jinxing |4 oth | |
| 700 | 1 | |a Li, Guang |4 oth | |
| 700 | 1 | |a Zhao, Haibo |4 oth | |
| 700 | 1 | |a Wang, Jiangang |4 oth | |
| 700 | 1 | |a Cao, Binyun |4 oth | |
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10.1016/j.theriogenology.2015.09.056 doi GBVA2016002000001.pica (DE-627)ELV024140953 (ELSEVIER)S0093-691X(15)00565-8 DE-627 ger DE-627 rakwb eng 590 590 DE-600 070 004 VZ LING DE-30 fid 54.00 bkl 53.71 bkl An, Xiaopeng verfasserin aut Identification and profiling of microRNAs in the ovaries of polytocous and monotocous goats during estrus 2016transfer abstract 12 nicht spezifiziert zzz rdacontent nicht spezifiziert z rdamedia nicht spezifiziert zu rdacarrier MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. Ovary Elsevier MicroRNA Elsevier Solexa sequencing Elsevier Goat Elsevier Song, Yuxuan oth Hou, Jinxing oth Li, Guang oth Zhao, Haibo oth Wang, Jiangang oth Cao, Binyun oth Enthalten in Elsevier Science Chen, Anyi ELSEVIER Multi-source monitoring information fusion method for dam health diagnosis based on Wasserstein distance 2023 an international journal of animal reproduction Amsterdam [u.a.] (DE-627)ELV009476539 volume:85 year:2016 number:4 day:1 month:03 pages:769-780 extent:12 https://doi.org/10.1016/j.theriogenology.2015.09.056 Volltext GBV_USEFLAG_U GBV_ELV SYSFLAG_U FID-LING SSG-OPC-BBI 54.00 Informatik: Allgemeines VZ 53.71 Theoretische Nachrichtentechnik VZ AR 85 2016 4 1 0301 769-780 12 045F 590 |
| spelling |
10.1016/j.theriogenology.2015.09.056 doi GBVA2016002000001.pica (DE-627)ELV024140953 (ELSEVIER)S0093-691X(15)00565-8 DE-627 ger DE-627 rakwb eng 590 590 DE-600 070 004 VZ LING DE-30 fid 54.00 bkl 53.71 bkl An, Xiaopeng verfasserin aut Identification and profiling of microRNAs in the ovaries of polytocous and monotocous goats during estrus 2016transfer abstract 12 nicht spezifiziert zzz rdacontent nicht spezifiziert z rdamedia nicht spezifiziert zu rdacarrier MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. Ovary Elsevier MicroRNA Elsevier Solexa sequencing Elsevier Goat Elsevier Song, Yuxuan oth Hou, Jinxing oth Li, Guang oth Zhao, Haibo oth Wang, Jiangang oth Cao, Binyun oth Enthalten in Elsevier Science Chen, Anyi ELSEVIER Multi-source monitoring information fusion method for dam health diagnosis based on Wasserstein distance 2023 an international journal of animal reproduction Amsterdam [u.a.] (DE-627)ELV009476539 volume:85 year:2016 number:4 day:1 month:03 pages:769-780 extent:12 https://doi.org/10.1016/j.theriogenology.2015.09.056 Volltext GBV_USEFLAG_U GBV_ELV SYSFLAG_U FID-LING SSG-OPC-BBI 54.00 Informatik: Allgemeines VZ 53.71 Theoretische Nachrichtentechnik VZ AR 85 2016 4 1 0301 769-780 12 045F 590 |
| allfields_unstemmed |
10.1016/j.theriogenology.2015.09.056 doi GBVA2016002000001.pica (DE-627)ELV024140953 (ELSEVIER)S0093-691X(15)00565-8 DE-627 ger DE-627 rakwb eng 590 590 DE-600 070 004 VZ LING DE-30 fid 54.00 bkl 53.71 bkl An, Xiaopeng verfasserin aut Identification and profiling of microRNAs in the ovaries of polytocous and monotocous goats during estrus 2016transfer abstract 12 nicht spezifiziert zzz rdacontent nicht spezifiziert z rdamedia nicht spezifiziert zu rdacarrier MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. Ovary Elsevier MicroRNA Elsevier Solexa sequencing Elsevier Goat Elsevier Song, Yuxuan oth Hou, Jinxing oth Li, Guang oth Zhao, Haibo oth Wang, Jiangang oth Cao, Binyun oth Enthalten in Elsevier Science Chen, Anyi ELSEVIER Multi-source monitoring information fusion method for dam health diagnosis based on Wasserstein distance 2023 an international journal of animal reproduction Amsterdam [u.a.] (DE-627)ELV009476539 volume:85 year:2016 number:4 day:1 month:03 pages:769-780 extent:12 https://doi.org/10.1016/j.theriogenology.2015.09.056 Volltext GBV_USEFLAG_U GBV_ELV SYSFLAG_U FID-LING SSG-OPC-BBI 54.00 Informatik: Allgemeines VZ 53.71 Theoretische Nachrichtentechnik VZ AR 85 2016 4 1 0301 769-780 12 045F 590 |
| allfieldsGer |
10.1016/j.theriogenology.2015.09.056 doi GBVA2016002000001.pica (DE-627)ELV024140953 (ELSEVIER)S0093-691X(15)00565-8 DE-627 ger DE-627 rakwb eng 590 590 DE-600 070 004 VZ LING DE-30 fid 54.00 bkl 53.71 bkl An, Xiaopeng verfasserin aut Identification and profiling of microRNAs in the ovaries of polytocous and monotocous goats during estrus 2016transfer abstract 12 nicht spezifiziert zzz rdacontent nicht spezifiziert z rdamedia nicht spezifiziert zu rdacarrier MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. Ovary Elsevier MicroRNA Elsevier Solexa sequencing Elsevier Goat Elsevier Song, Yuxuan oth Hou, Jinxing oth Li, Guang oth Zhao, Haibo oth Wang, Jiangang oth Cao, Binyun oth Enthalten in Elsevier Science Chen, Anyi ELSEVIER Multi-source monitoring information fusion method for dam health diagnosis based on Wasserstein distance 2023 an international journal of animal reproduction Amsterdam [u.a.] (DE-627)ELV009476539 volume:85 year:2016 number:4 day:1 month:03 pages:769-780 extent:12 https://doi.org/10.1016/j.theriogenology.2015.09.056 Volltext GBV_USEFLAG_U GBV_ELV SYSFLAG_U FID-LING SSG-OPC-BBI 54.00 Informatik: Allgemeines VZ 53.71 Theoretische Nachrichtentechnik VZ AR 85 2016 4 1 0301 769-780 12 045F 590 |
| allfieldsSound |
10.1016/j.theriogenology.2015.09.056 doi GBVA2016002000001.pica (DE-627)ELV024140953 (ELSEVIER)S0093-691X(15)00565-8 DE-627 ger DE-627 rakwb eng 590 590 DE-600 070 004 VZ LING DE-30 fid 54.00 bkl 53.71 bkl An, Xiaopeng verfasserin aut Identification and profiling of microRNAs in the ovaries of polytocous and monotocous goats during estrus 2016transfer abstract 12 nicht spezifiziert zzz rdacontent nicht spezifiziert z rdamedia nicht spezifiziert zu rdacarrier MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. Ovary Elsevier MicroRNA Elsevier Solexa sequencing Elsevier Goat Elsevier Song, Yuxuan oth Hou, Jinxing oth Li, Guang oth Zhao, Haibo oth Wang, Jiangang oth Cao, Binyun oth Enthalten in Elsevier Science Chen, Anyi ELSEVIER Multi-source monitoring information fusion method for dam health diagnosis based on Wasserstein distance 2023 an international journal of animal reproduction Amsterdam [u.a.] (DE-627)ELV009476539 volume:85 year:2016 number:4 day:1 month:03 pages:769-780 extent:12 https://doi.org/10.1016/j.theriogenology.2015.09.056 Volltext GBV_USEFLAG_U GBV_ELV SYSFLAG_U FID-LING SSG-OPC-BBI 54.00 Informatik: Allgemeines VZ 53.71 Theoretische Nachrichtentechnik VZ AR 85 2016 4 1 0301 769-780 12 045F 590 |
| language |
English |
| source |
Enthalten in Multi-source monitoring information fusion method for dam health diagnosis based on Wasserstein distance Amsterdam [u.a.] volume:85 year:2016 number:4 day:1 month:03 pages:769-780 extent:12 |
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identification and profiling of micrornas in the ovaries of polytocous and monotocous goats during estrus |
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Identification and profiling of microRNAs in the ovaries of polytocous and monotocous goats during estrus |
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MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. |
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MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. |
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MicroRNAs (miRNAs) play critical roles in almost all ovarian biological processes, including folliculogenesis, ovulation, luteal development, and regression. The study identified known and novel miRNAs in the ovaries of polytocous and monotocous goats by combining Solexa sequencing with bioinformatics. In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation. |
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In total, 862 known and 53 novel miRNAs were identified in the ovaries of polytocous and monotocous goats. A total of 771 miRNAs were co-expressed in both libraries. One hundred twenty miRNAs in the ovaries of polytocous goats and 24 miRNAs in the ovaries of monotocous goats were specifically expressed. In addition, 445 miRNAs were differentially expressed in the ovaries of polytocous and monotocous goats, of which 348 were upregulated, and 97 were downregulated in the ovaries of polytocous goats compared with the ovaries of monotocous goats (P values < 0.05 and |log2 (fold change)|> 1). The expression levels of 12 randomly selected miRNAs were analyzed by stem-loop real-time quantitative polymerase chain reaction, and the results demonstrated that the expression patterns were consistent with Solexa sequencing results. KEGG analysis showed that GnRH, transforming growth factor-beta, vascular endothelial growth factor, and mammalian target of rapamycin signaling pathways, oocyte meiosis and ovarian steroidogenesis participated in follicular development and ovulation. On the basis of miRNA–mRNA network analysis and luciferase reporter assays, the ggo-miR-4488-p3_1ss10CG, bta-miR-2892-p5_1ss8CG and hsa-miR-4532_L+1R-3 were closely related with prolific traits. The results will help to further understand the role of miRNAs in kidding rate regulation.</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">Ovary</subfield><subfield code="2">Elsevier</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">MicroRNA</subfield><subfield code="2">Elsevier</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">Solexa sequencing</subfield><subfield code="2">Elsevier</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">Goat</subfield><subfield code="2">Elsevier</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Song, Yuxuan</subfield><subfield code="4">oth</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Hou, Jinxing</subfield><subfield code="4">oth</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Li, Guang</subfield><subfield code="4">oth</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Zhao, Haibo</subfield><subfield code="4">oth</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Wang, Jiangang</subfield><subfield code="4">oth</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Cao, Binyun</subfield><subfield code="4">oth</subfield></datafield><datafield tag="773" ind1="0" ind2="8"><subfield code="i">Enthalten in</subfield><subfield code="n">Elsevier Science</subfield><subfield code="a">Chen, Anyi ELSEVIER</subfield><subfield code="t">Multi-source monitoring information fusion method for dam health diagnosis based on Wasserstein distance</subfield><subfield code="d">2023</subfield><subfield code="d">an international journal of animal reproduction</subfield><subfield code="g">Amsterdam [u.a.]</subfield><subfield code="w">(DE-627)ELV009476539</subfield></datafield><datafield tag="773" ind1="1" ind2="8"><subfield code="g">volume:85</subfield><subfield code="g">year:2016</subfield><subfield code="g">number:4</subfield><subfield code="g">day:1</subfield><subfield code="g">month:03</subfield><subfield code="g">pages:769-780</subfield><subfield code="g">extent:12</subfield></datafield><datafield tag="856" ind1="4" ind2="0"><subfield code="u">https://doi.org/10.1016/j.theriogenology.2015.09.056</subfield><subfield code="3">Volltext</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_USEFLAG_U</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">GBV_ELV</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">SYSFLAG_U</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">FID-LING</subfield></datafield><datafield tag="912" ind1=" " ind2=" "><subfield code="a">SSG-OPC-BBI</subfield></datafield><datafield tag="936" ind1="b" ind2="k"><subfield code="a">54.00</subfield><subfield code="j">Informatik: Allgemeines</subfield><subfield code="q">VZ</subfield></datafield><datafield tag="936" ind1="b" ind2="k"><subfield code="a">53.71</subfield><subfield code="j">Theoretische Nachrichtentechnik</subfield><subfield code="q">VZ</subfield></datafield><datafield tag="951" ind1=" " ind2=" "><subfield code="a">AR</subfield></datafield><datafield tag="952" ind1=" " ind2=" "><subfield code="d">85</subfield><subfield code="j">2016</subfield><subfield code="e">4</subfield><subfield code="b">1</subfield><subfield code="c">0301</subfield><subfield code="h">769-780</subfield><subfield code="g">12</subfield></datafield><datafield tag="953" ind1=" " ind2=" "><subfield code="2">045F</subfield><subfield code="a">590</subfield></datafield></record></collection>
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