Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates

Soil bacterial community assembly determined by both the niche-based deterministic and the stochastic process. However, at aggregate scale, the contribution and limitation of those theories in soil bacterial community assembly process still unknown. In this study, different aggregate fractions with...
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Gespeichert in:

Autor*in:	Wang, Yan [verfasserIn] Zhu, Kun [verfasserIn] Chen, Xin [verfasserIn] Wei, Keyu [verfasserIn] Wu, Rong [verfasserIn] Wang, Gang [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2023

Schlagwörter:	Soil aggregates Bacterial community assembly Deterministic and the stochastic factors Bacterial immigration rate

Übergeordnetes Werk:	Enthalten in: Applied soil ecology - Amsterdam : Elsevier, 1994, 193
Übergeordnetes Werk:	volume:193

DOI / URN:	10.1016/j.apsoil.2023.105153

Katalog-ID:	ELV065592298

Internformat


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520			\|a Soil bacterial community assembly determined by both the niche-based deterministic and the stochastic process. However, at aggregate scale, the contribution and limitation of those theories in soil bacterial community assembly process still unknown. In this study, different aggregate fractions with a water-controllable unit were performed to build a simple system, aiming to (i) exhibit a contrasting bacterial community assembly pattern of aggregate fractions after incubation under different water content, (ii) quantify the variations of bacterial community during incubation caused by niches or deterministic factors of physic-chemical characteristics, and (iii) assess the pore water driven immigration rates of neutral or stochastic processes caused by different aggregate fractions on bacterial community assembly by neutral community model (NCM). We found a significantly time-decay of bacteria community of different soil aggregate fractions during the incubation period. Despite of the decrease of the total OTU amounts, the proportion of the unique OTUs in the aggregates of <0.25 mm and shared OTUs in three soil aggregate fractions increased under both saturated and unsaturated conditions. Microbial communities in aggregates of <0.25 mm were more distinctive enriched the core microbiota of Firmicutes and Proteobacteria than other aggregates, which might relate to the higher availability N and pH value. Under water saturated situation, bacterial migration rate of 0.25–1 mm at the early-stage was higher than others indicated the ineligible role of water-driven bacterial dispersal on bacterial community assembly process. Those results revealed the deterministic and stochastic mechanism of soil bacterial community assembly at aggregate scale, which helps to unravel the mysterious soil habitat.
650		4	\|a Soil aggregates
650		4	\|a Bacterial community assembly
650		4	\|a Deterministic and the stochastic factors
650		4	\|a Bacterial immigration rate
700	1		\|a Zhu, Kun \|e verfasserin \|4 aut
700	1		\|a Chen, Xin \|e verfasserin \|4 aut
700	1		\|a Wei, Keyu \|e verfasserin \|4 aut
700	1		\|a Wu, Rong \|e verfasserin \|4 aut
700	1		\|a Wang, Gang \|e verfasserin \|4 aut
773	0	8	\|i Enthalten in \|t Applied soil ecology \|d Amsterdam : Elsevier, 1994 \|g 193 \|h Online-Ressource \|w (DE-627)320507602 \|w (DE-600)2013020-X \|w (DE-576)094477108 \|7 nnns
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allfields	10.1016/j.apsoil.2023.105153 doi (DE-627)ELV065592298 (ELSEVIER)S0929-1393(23)00351-7 DE-627 ger DE-627 rda eng 630 640 VZ BIODIV DE-30 fid 42.90 bkl 48.32 bkl Wang, Yan verfasserin aut Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates 2023 nicht spezifiziert zzz rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Soil bacterial community assembly determined by both the niche-based deterministic and the stochastic process. However, at aggregate scale, the contribution and limitation of those theories in soil bacterial community assembly process still unknown. In this study, different aggregate fractions with a water-controllable unit were performed to build a simple system, aiming to (i) exhibit a contrasting bacterial community assembly pattern of aggregate fractions after incubation under different water content, (ii) quantify the variations of bacterial community during incubation caused by niches or deterministic factors of physic-chemical characteristics, and (iii) assess the pore water driven immigration rates of neutral or stochastic processes caused by different aggregate fractions on bacterial community assembly by neutral community model (NCM). We found a significantly time-decay of bacteria community of different soil aggregate fractions during the incubation period. Despite of the decrease of the total OTU amounts, the proportion of the unique OTUs in the aggregates of <0.25 mm and shared OTUs in three soil aggregate fractions increased under both saturated and unsaturated conditions. Microbial communities in aggregates of <0.25 mm were more distinctive enriched the core microbiota of Firmicutes and Proteobacteria than other aggregates, which might relate to the higher availability N and pH value. Under water saturated situation, bacterial migration rate of 0.25–1 mm at the early-stage was higher than others indicated the ineligible role of water-driven bacterial dispersal on bacterial community assembly process. Those results revealed the deterministic and stochastic mechanism of soil bacterial community assembly at aggregate scale, which helps to unravel the mysterious soil habitat. Soil aggregates Bacterial community assembly Deterministic and the stochastic factors Bacterial immigration rate Zhu, Kun verfasserin aut Chen, Xin verfasserin aut Wei, Keyu verfasserin aut Wu, Rong verfasserin aut Wang, Gang verfasserin aut Enthalten in Applied soil ecology Amsterdam : Elsevier, 1994 193 Online-Ressource (DE-627)320507602 (DE-600)2013020-X (DE-576)094477108 nnns volume:193 GBV_USEFLAG_U GBV_ELV SYSFLAG_U FID-BIODIV SSG-OPC-GGO SSG-OPC-FOR GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_165 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_370 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2007 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2034 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2106 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.90 Ökologie: Allgemeines VZ 48.32 Bodenkunde Bodenbewertung Land- und Forstwirtschaft VZ AR 193
spelling	10.1016/j.apsoil.2023.105153 doi (DE-627)ELV065592298 (ELSEVIER)S0929-1393(23)00351-7 DE-627 ger DE-627 rda eng 630 640 VZ BIODIV DE-30 fid 42.90 bkl 48.32 bkl Wang, Yan verfasserin aut Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates 2023 nicht spezifiziert zzz rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Soil bacterial community assembly determined by both the niche-based deterministic and the stochastic process. However, at aggregate scale, the contribution and limitation of those theories in soil bacterial community assembly process still unknown. In this study, different aggregate fractions with a water-controllable unit were performed to build a simple system, aiming to (i) exhibit a contrasting bacterial community assembly pattern of aggregate fractions after incubation under different water content, (ii) quantify the variations of bacterial community during incubation caused by niches or deterministic factors of physic-chemical characteristics, and (iii) assess the pore water driven immigration rates of neutral or stochastic processes caused by different aggregate fractions on bacterial community assembly by neutral community model (NCM). We found a significantly time-decay of bacteria community of different soil aggregate fractions during the incubation period. Despite of the decrease of the total OTU amounts, the proportion of the unique OTUs in the aggregates of <0.25 mm and shared OTUs in three soil aggregate fractions increased under both saturated and unsaturated conditions. Microbial communities in aggregates of <0.25 mm were more distinctive enriched the core microbiota of Firmicutes and Proteobacteria than other aggregates, which might relate to the higher availability N and pH value. Under water saturated situation, bacterial migration rate of 0.25–1 mm at the early-stage was higher than others indicated the ineligible role of water-driven bacterial dispersal on bacterial community assembly process. Those results revealed the deterministic and stochastic mechanism of soil bacterial community assembly at aggregate scale, which helps to unravel the mysterious soil habitat. Soil aggregates Bacterial community assembly Deterministic and the stochastic factors Bacterial immigration rate Zhu, Kun verfasserin aut Chen, Xin verfasserin aut Wei, Keyu verfasserin aut Wu, Rong verfasserin aut Wang, Gang verfasserin aut Enthalten in Applied soil ecology Amsterdam : Elsevier, 1994 193 Online-Ressource (DE-627)320507602 (DE-600)2013020-X (DE-576)094477108 nnns volume:193 GBV_USEFLAG_U GBV_ELV SYSFLAG_U FID-BIODIV SSG-OPC-GGO SSG-OPC-FOR GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_165 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_370 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2007 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2034 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2106 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.90 Ökologie: Allgemeines VZ 48.32 Bodenkunde Bodenbewertung Land- und Forstwirtschaft VZ AR 193
allfields_unstemmed	10.1016/j.apsoil.2023.105153 doi (DE-627)ELV065592298 (ELSEVIER)S0929-1393(23)00351-7 DE-627 ger DE-627 rda eng 630 640 VZ BIODIV DE-30 fid 42.90 bkl 48.32 bkl Wang, Yan verfasserin aut Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates 2023 nicht spezifiziert zzz rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Soil bacterial community assembly determined by both the niche-based deterministic and the stochastic process. However, at aggregate scale, the contribution and limitation of those theories in soil bacterial community assembly process still unknown. In this study, different aggregate fractions with a water-controllable unit were performed to build a simple system, aiming to (i) exhibit a contrasting bacterial community assembly pattern of aggregate fractions after incubation under different water content, (ii) quantify the variations of bacterial community during incubation caused by niches or deterministic factors of physic-chemical characteristics, and (iii) assess the pore water driven immigration rates of neutral or stochastic processes caused by different aggregate fractions on bacterial community assembly by neutral community model (NCM). We found a significantly time-decay of bacteria community of different soil aggregate fractions during the incubation period. Despite of the decrease of the total OTU amounts, the proportion of the unique OTUs in the aggregates of <0.25 mm and shared OTUs in three soil aggregate fractions increased under both saturated and unsaturated conditions. Microbial communities in aggregates of <0.25 mm were more distinctive enriched the core microbiota of Firmicutes and Proteobacteria than other aggregates, which might relate to the higher availability N and pH value. Under water saturated situation, bacterial migration rate of 0.25–1 mm at the early-stage was higher than others indicated the ineligible role of water-driven bacterial dispersal on bacterial community assembly process. Those results revealed the deterministic and stochastic mechanism of soil bacterial community assembly at aggregate scale, which helps to unravel the mysterious soil habitat. Soil aggregates Bacterial community assembly Deterministic and the stochastic factors Bacterial immigration rate Zhu, Kun verfasserin aut Chen, Xin verfasserin aut Wei, Keyu verfasserin aut Wu, Rong verfasserin aut Wang, Gang verfasserin aut Enthalten in Applied soil ecology Amsterdam : Elsevier, 1994 193 Online-Ressource (DE-627)320507602 (DE-600)2013020-X (DE-576)094477108 nnns volume:193 GBV_USEFLAG_U GBV_ELV SYSFLAG_U FID-BIODIV SSG-OPC-GGO SSG-OPC-FOR GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_165 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_370 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2007 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2034 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2106 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.90 Ökologie: Allgemeines VZ 48.32 Bodenkunde Bodenbewertung Land- und Forstwirtschaft VZ AR 193
allfieldsGer	10.1016/j.apsoil.2023.105153 doi (DE-627)ELV065592298 (ELSEVIER)S0929-1393(23)00351-7 DE-627 ger DE-627 rda eng 630 640 VZ BIODIV DE-30 fid 42.90 bkl 48.32 bkl Wang, Yan verfasserin aut Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates 2023 nicht spezifiziert zzz rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Soil bacterial community assembly determined by both the niche-based deterministic and the stochastic process. However, at aggregate scale, the contribution and limitation of those theories in soil bacterial community assembly process still unknown. In this study, different aggregate fractions with a water-controllable unit were performed to build a simple system, aiming to (i) exhibit a contrasting bacterial community assembly pattern of aggregate fractions after incubation under different water content, (ii) quantify the variations of bacterial community during incubation caused by niches or deterministic factors of physic-chemical characteristics, and (iii) assess the pore water driven immigration rates of neutral or stochastic processes caused by different aggregate fractions on bacterial community assembly by neutral community model (NCM). We found a significantly time-decay of bacteria community of different soil aggregate fractions during the incubation period. Despite of the decrease of the total OTU amounts, the proportion of the unique OTUs in the aggregates of <0.25 mm and shared OTUs in three soil aggregate fractions increased under both saturated and unsaturated conditions. Microbial communities in aggregates of <0.25 mm were more distinctive enriched the core microbiota of Firmicutes and Proteobacteria than other aggregates, which might relate to the higher availability N and pH value. Under water saturated situation, bacterial migration rate of 0.25–1 mm at the early-stage was higher than others indicated the ineligible role of water-driven bacterial dispersal on bacterial community assembly process. Those results revealed the deterministic and stochastic mechanism of soil bacterial community assembly at aggregate scale, which helps to unravel the mysterious soil habitat. Soil aggregates Bacterial community assembly Deterministic and the stochastic factors Bacterial immigration rate Zhu, Kun verfasserin aut Chen, Xin verfasserin aut Wei, Keyu verfasserin aut Wu, Rong verfasserin aut Wang, Gang verfasserin aut Enthalten in Applied soil ecology Amsterdam : Elsevier, 1994 193 Online-Ressource (DE-627)320507602 (DE-600)2013020-X (DE-576)094477108 nnns volume:193 GBV_USEFLAG_U GBV_ELV SYSFLAG_U FID-BIODIV SSG-OPC-GGO SSG-OPC-FOR GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_165 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_370 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2007 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2034 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2106 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.90 Ökologie: Allgemeines VZ 48.32 Bodenkunde Bodenbewertung Land- und Forstwirtschaft VZ AR 193
allfieldsSound	10.1016/j.apsoil.2023.105153 doi (DE-627)ELV065592298 (ELSEVIER)S0929-1393(23)00351-7 DE-627 ger DE-627 rda eng 630 640 VZ BIODIV DE-30 fid 42.90 bkl 48.32 bkl Wang, Yan verfasserin aut Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates 2023 nicht spezifiziert zzz rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Soil bacterial community assembly determined by both the niche-based deterministic and the stochastic process. However, at aggregate scale, the contribution and limitation of those theories in soil bacterial community assembly process still unknown. In this study, different aggregate fractions with a water-controllable unit were performed to build a simple system, aiming to (i) exhibit a contrasting bacterial community assembly pattern of aggregate fractions after incubation under different water content, (ii) quantify the variations of bacterial community during incubation caused by niches or deterministic factors of physic-chemical characteristics, and (iii) assess the pore water driven immigration rates of neutral or stochastic processes caused by different aggregate fractions on bacterial community assembly by neutral community model (NCM). We found a significantly time-decay of bacteria community of different soil aggregate fractions during the incubation period. Despite of the decrease of the total OTU amounts, the proportion of the unique OTUs in the aggregates of <0.25 mm and shared OTUs in three soil aggregate fractions increased under both saturated and unsaturated conditions. Microbial communities in aggregates of <0.25 mm were more distinctive enriched the core microbiota of Firmicutes and Proteobacteria than other aggregates, which might relate to the higher availability N and pH value. Under water saturated situation, bacterial migration rate of 0.25–1 mm at the early-stage was higher than others indicated the ineligible role of water-driven bacterial dispersal on bacterial community assembly process. Those results revealed the deterministic and stochastic mechanism of soil bacterial community assembly at aggregate scale, which helps to unravel the mysterious soil habitat. Soil aggregates Bacterial community assembly Deterministic and the stochastic factors Bacterial immigration rate Zhu, Kun verfasserin aut Chen, Xin verfasserin aut Wei, Keyu verfasserin aut Wu, Rong verfasserin aut Wang, Gang verfasserin aut Enthalten in Applied soil ecology Amsterdam : Elsevier, 1994 193 Online-Ressource (DE-627)320507602 (DE-600)2013020-X (DE-576)094477108 nnns volume:193 GBV_USEFLAG_U GBV_ELV SYSFLAG_U FID-BIODIV SSG-OPC-GGO SSG-OPC-FOR GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_165 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_370 GBV_ILN_602 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2007 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2034 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2106 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2470 GBV_ILN_2507 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.90 Ökologie: Allgemeines VZ 48.32 Bodenkunde Bodenbewertung Land- und Forstwirtschaft VZ AR 193
language	English
source	Enthalten in Applied soil ecology 193 volume:193
sourceStr	Enthalten in Applied soil ecology 193 volume:193
format_phy_str_mv	Article
bklname	Ökologie: Allgemeines Bodenkunde Bodenbewertung
institution	findex.gbv.de
topic_facet	Soil aggregates Bacterial community assembly Deterministic and the stochastic factors Bacterial immigration rate
dewey-raw	630
isfreeaccess_bool	false
container_title	Applied soil ecology
authorswithroles_txt_mv	Wang, Yan @@aut@@ Zhu, Kun @@aut@@ Chen, Xin @@aut@@ Wei, Keyu @@aut@@ Wu, Rong @@aut@@ Wang, Gang @@aut@@
publishDateDaySort_date	2023-01-01T00:00:00Z
hierarchy_top_id	320507602
dewey-sort	3630
id	ELV065592298
language_de	englisch
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author	Wang, Yan
spellingShingle	Wang, Yan ddc 630 fid BIODIV bkl 42.90 bkl 48.32 misc Soil aggregates misc Bacterial community assembly misc Deterministic and the stochastic factors misc Bacterial immigration rate Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates
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topic_title	630 640 VZ BIODIV DE-30 fid 42.90 bkl 48.32 bkl Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates Soil aggregates Bacterial community assembly Deterministic and the stochastic factors Bacterial immigration rate
topic	ddc 630 fid BIODIV bkl 42.90 bkl 48.32 misc Soil aggregates misc Bacterial community assembly misc Deterministic and the stochastic factors misc Bacterial immigration rate
topic_unstemmed	ddc 630 fid BIODIV bkl 42.90 bkl 48.32 misc Soil aggregates misc Bacterial community assembly misc Deterministic and the stochastic factors misc Bacterial immigration rate
topic_browse	ddc 630 fid BIODIV bkl 42.90 bkl 48.32 misc Soil aggregates misc Bacterial community assembly misc Deterministic and the stochastic factors misc Bacterial immigration rate
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title	Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates
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title_full	Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates
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author_browse	Wang, Yan Zhu, Kun Chen, Xin Wei, Keyu Wu, Rong Wang, Gang
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title_sort	stochastic and deterministic assembly processes of bacterial communities in different soil aggregates
title_auth	Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates
abstract	Soil bacterial community assembly determined by both the niche-based deterministic and the stochastic process. However, at aggregate scale, the contribution and limitation of those theories in soil bacterial community assembly process still unknown. In this study, different aggregate fractions with a water-controllable unit were performed to build a simple system, aiming to (i) exhibit a contrasting bacterial community assembly pattern of aggregate fractions after incubation under different water content, (ii) quantify the variations of bacterial community during incubation caused by niches or deterministic factors of physic-chemical characteristics, and (iii) assess the pore water driven immigration rates of neutral or stochastic processes caused by different aggregate fractions on bacterial community assembly by neutral community model (NCM). We found a significantly time-decay of bacteria community of different soil aggregate fractions during the incubation period. Despite of the decrease of the total OTU amounts, the proportion of the unique OTUs in the aggregates of <0.25 mm and shared OTUs in three soil aggregate fractions increased under both saturated and unsaturated conditions. Microbial communities in aggregates of <0.25 mm were more distinctive enriched the core microbiota of Firmicutes and Proteobacteria than other aggregates, which might relate to the higher availability N and pH value. Under water saturated situation, bacterial migration rate of 0.25–1 mm at the early-stage was higher than others indicated the ineligible role of water-driven bacterial dispersal on bacterial community assembly process. Those results revealed the deterministic and stochastic mechanism of soil bacterial community assembly at aggregate scale, which helps to unravel the mysterious soil habitat.
abstractGer	Soil bacterial community assembly determined by both the niche-based deterministic and the stochastic process. However, at aggregate scale, the contribution and limitation of those theories in soil bacterial community assembly process still unknown. In this study, different aggregate fractions with a water-controllable unit were performed to build a simple system, aiming to (i) exhibit a contrasting bacterial community assembly pattern of aggregate fractions after incubation under different water content, (ii) quantify the variations of bacterial community during incubation caused by niches or deterministic factors of physic-chemical characteristics, and (iii) assess the pore water driven immigration rates of neutral or stochastic processes caused by different aggregate fractions on bacterial community assembly by neutral community model (NCM). We found a significantly time-decay of bacteria community of different soil aggregate fractions during the incubation period. Despite of the decrease of the total OTU amounts, the proportion of the unique OTUs in the aggregates of <0.25 mm and shared OTUs in three soil aggregate fractions increased under both saturated and unsaturated conditions. Microbial communities in aggregates of <0.25 mm were more distinctive enriched the core microbiota of Firmicutes and Proteobacteria than other aggregates, which might relate to the higher availability N and pH value. Under water saturated situation, bacterial migration rate of 0.25–1 mm at the early-stage was higher than others indicated the ineligible role of water-driven bacterial dispersal on bacterial community assembly process. Those results revealed the deterministic and stochastic mechanism of soil bacterial community assembly at aggregate scale, which helps to unravel the mysterious soil habitat.
abstract_unstemmed	Soil bacterial community assembly determined by both the niche-based deterministic and the stochastic process. However, at aggregate scale, the contribution and limitation of those theories in soil bacterial community assembly process still unknown. In this study, different aggregate fractions with a water-controllable unit were performed to build a simple system, aiming to (i) exhibit a contrasting bacterial community assembly pattern of aggregate fractions after incubation under different water content, (ii) quantify the variations of bacterial community during incubation caused by niches or deterministic factors of physic-chemical characteristics, and (iii) assess the pore water driven immigration rates of neutral or stochastic processes caused by different aggregate fractions on bacterial community assembly by neutral community model (NCM). We found a significantly time-decay of bacteria community of different soil aggregate fractions during the incubation period. Despite of the decrease of the total OTU amounts, the proportion of the unique OTUs in the aggregates of <0.25 mm and shared OTUs in three soil aggregate fractions increased under both saturated and unsaturated conditions. Microbial communities in aggregates of <0.25 mm were more distinctive enriched the core microbiota of Firmicutes and Proteobacteria than other aggregates, which might relate to the higher availability N and pH value. Under water saturated situation, bacterial migration rate of 0.25–1 mm at the early-stage was higher than others indicated the ineligible role of water-driven bacterial dispersal on bacterial community assembly process. Those results revealed the deterministic and stochastic mechanism of soil bacterial community assembly at aggregate scale, which helps to unravel the mysterious soil habitat.
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title_short	Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates
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author2	Zhu, Kun Chen, Xin Wei, Keyu Wu, Rong Wang, Gang
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up_date	2024-07-06T23:34:08.922Z
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Stochastic and deterministic assembly processes of bacterial communities in different soil aggregates

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