Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae)

Abstract This study examines genetic relationships among and within the South American species of Oreobolus that span the temperate and tropical Andes hotspots and represent a good case study to investigate diversification in the Páramo. A total of 197 individuals covering the distributional range o...
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Autor*in:	Gómez-Gutiérrez, María Camila [verfasserIn] Pennington, R. Toby Neaves, Linda E. Milne, Richard I. Madriñán, Santiago Richardson, James E.

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2017

Schlagwörter:	Biogeography Andes Species tree Lineage sorting Hybridization Páramo

Anmerkung:	© Swiss Botanical Society 2017

Übergeordnetes Werk:	Enthalten in: Botanica Helvetica - Berlin : Springer, 1981, 127(2017), 2 vom: 05. Sept., Seite 155-170
Übergeordnetes Werk:	volume:127 ; year:2017 ; number:2 ; day:05 ; month:09 ; pages:155-170

Links:	Volltext

DOI / URN:	10.1007/s00035-017-0192-z

Katalog-ID:	SPR000627615

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allfields	10.1007/s00035-017-0192-z doi (DE-627)SPR000627615 (SPR)s00035-017-0192-z-e DE-627 ger DE-627 rakwb eng Gómez-Gutiérrez, María Camila verfasserin aut Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae) 2017 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Swiss Botanical Society 2017 Abstract This study examines genetic relationships among and within the South American species of Oreobolus that span the temperate and tropical Andes hotspots and represent a good case study to investigate diversification in the Páramo. A total of 197 individuals covering the distributional range of most of these species were sequenced for the nuclear ribosomal internal transcribed spacer (ITS) and 118 individuals for three chloroplast DNA regions (trnL-F, trnH-psbA and rpl32-trnL). Haplotype networks and measures of genetic diversity were calculated at different taxonomic and geographic levels. To test for possible geographic structure, a spatial analysis of molecular variance (SAMOVA) was undertaken and species relationships were recovered using a coalescent-based approach. Results indicate complex relationships among the five South American species of Oreobolus, which are likely to have been confounded by incomplete lineage sorting, though hybridization cannot be completely discarded as an influence on genetic patterns, particularly among the northern populations of O. obtusangulus and O. cleefii. We report a case of cryptic speciation in O. obtusangulus where northern and southern populations of morphologically similar individuals are genetically distinct in all analyses. At the population level, the genetic evidence is consistent with contraction and expansion of islands of Páramo vegetation during the climatic fluctuations of the Quaternary, highlighting the role of these processes in shaping modern diversity in that ecosystem. Biogeography (dpeaa)DE-He213 Andes (dpeaa)DE-He213 Species tree (dpeaa)DE-He213 Lineage sorting (dpeaa)DE-He213 Hybridization (dpeaa)DE-He213 Páramo (dpeaa)DE-He213 Pennington, R. Toby aut Neaves, Linda E. aut Milne, Richard I. aut Madriñán, Santiago aut Richardson, James E. (orcid)0000-0001-9014-4865 aut Enthalten in Botanica Helvetica Berlin : Springer, 1981 127(2017), 2 vom: 05. Sept., Seite 155-170 (DE-627)494324775 (DE-600)2196426-9 1420-9063 nnns volume:127 year:2017 number:2 day:05 month:09 pages:155-170 https://dx.doi.org/10.1007/s00035-017-0192-z lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_152 GBV_ILN_161 GBV_ILN_187 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_702 AR 127 2017 2 05 09 155-170
spelling	10.1007/s00035-017-0192-z doi (DE-627)SPR000627615 (SPR)s00035-017-0192-z-e DE-627 ger DE-627 rakwb eng Gómez-Gutiérrez, María Camila verfasserin aut Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae) 2017 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Swiss Botanical Society 2017 Abstract This study examines genetic relationships among and within the South American species of Oreobolus that span the temperate and tropical Andes hotspots and represent a good case study to investigate diversification in the Páramo. A total of 197 individuals covering the distributional range of most of these species were sequenced for the nuclear ribosomal internal transcribed spacer (ITS) and 118 individuals for three chloroplast DNA regions (trnL-F, trnH-psbA and rpl32-trnL). Haplotype networks and measures of genetic diversity were calculated at different taxonomic and geographic levels. To test for possible geographic structure, a spatial analysis of molecular variance (SAMOVA) was undertaken and species relationships were recovered using a coalescent-based approach. Results indicate complex relationships among the five South American species of Oreobolus, which are likely to have been confounded by incomplete lineage sorting, though hybridization cannot be completely discarded as an influence on genetic patterns, particularly among the northern populations of O. obtusangulus and O. cleefii. We report a case of cryptic speciation in O. obtusangulus where northern and southern populations of morphologically similar individuals are genetically distinct in all analyses. At the population level, the genetic evidence is consistent with contraction and expansion of islands of Páramo vegetation during the climatic fluctuations of the Quaternary, highlighting the role of these processes in shaping modern diversity in that ecosystem. Biogeography (dpeaa)DE-He213 Andes (dpeaa)DE-He213 Species tree (dpeaa)DE-He213 Lineage sorting (dpeaa)DE-He213 Hybridization (dpeaa)DE-He213 Páramo (dpeaa)DE-He213 Pennington, R. Toby aut Neaves, Linda E. aut Milne, Richard I. aut Madriñán, Santiago aut Richardson, James E. (orcid)0000-0001-9014-4865 aut Enthalten in Botanica Helvetica Berlin : Springer, 1981 127(2017), 2 vom: 05. Sept., Seite 155-170 (DE-627)494324775 (DE-600)2196426-9 1420-9063 nnns volume:127 year:2017 number:2 day:05 month:09 pages:155-170 https://dx.doi.org/10.1007/s00035-017-0192-z lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_152 GBV_ILN_161 GBV_ILN_187 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_702 AR 127 2017 2 05 09 155-170
allfields_unstemmed	10.1007/s00035-017-0192-z doi (DE-627)SPR000627615 (SPR)s00035-017-0192-z-e DE-627 ger DE-627 rakwb eng Gómez-Gutiérrez, María Camila verfasserin aut Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae) 2017 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Swiss Botanical Society 2017 Abstract This study examines genetic relationships among and within the South American species of Oreobolus that span the temperate and tropical Andes hotspots and represent a good case study to investigate diversification in the Páramo. A total of 197 individuals covering the distributional range of most of these species were sequenced for the nuclear ribosomal internal transcribed spacer (ITS) and 118 individuals for three chloroplast DNA regions (trnL-F, trnH-psbA and rpl32-trnL). Haplotype networks and measures of genetic diversity were calculated at different taxonomic and geographic levels. To test for possible geographic structure, a spatial analysis of molecular variance (SAMOVA) was undertaken and species relationships were recovered using a coalescent-based approach. Results indicate complex relationships among the five South American species of Oreobolus, which are likely to have been confounded by incomplete lineage sorting, though hybridization cannot be completely discarded as an influence on genetic patterns, particularly among the northern populations of O. obtusangulus and O. cleefii. We report a case of cryptic speciation in O. obtusangulus where northern and southern populations of morphologically similar individuals are genetically distinct in all analyses. At the population level, the genetic evidence is consistent with contraction and expansion of islands of Páramo vegetation during the climatic fluctuations of the Quaternary, highlighting the role of these processes in shaping modern diversity in that ecosystem. Biogeography (dpeaa)DE-He213 Andes (dpeaa)DE-He213 Species tree (dpeaa)DE-He213 Lineage sorting (dpeaa)DE-He213 Hybridization (dpeaa)DE-He213 Páramo (dpeaa)DE-He213 Pennington, R. Toby aut Neaves, Linda E. aut Milne, Richard I. aut Madriñán, Santiago aut Richardson, James E. (orcid)0000-0001-9014-4865 aut Enthalten in Botanica Helvetica Berlin : Springer, 1981 127(2017), 2 vom: 05. Sept., Seite 155-170 (DE-627)494324775 (DE-600)2196426-9 1420-9063 nnns volume:127 year:2017 number:2 day:05 month:09 pages:155-170 https://dx.doi.org/10.1007/s00035-017-0192-z lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_152 GBV_ILN_161 GBV_ILN_187 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_702 AR 127 2017 2 05 09 155-170
allfieldsGer	10.1007/s00035-017-0192-z doi (DE-627)SPR000627615 (SPR)s00035-017-0192-z-e DE-627 ger DE-627 rakwb eng Gómez-Gutiérrez, María Camila verfasserin aut Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae) 2017 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Swiss Botanical Society 2017 Abstract This study examines genetic relationships among and within the South American species of Oreobolus that span the temperate and tropical Andes hotspots and represent a good case study to investigate diversification in the Páramo. A total of 197 individuals covering the distributional range of most of these species were sequenced for the nuclear ribosomal internal transcribed spacer (ITS) and 118 individuals for three chloroplast DNA regions (trnL-F, trnH-psbA and rpl32-trnL). Haplotype networks and measures of genetic diversity were calculated at different taxonomic and geographic levels. To test for possible geographic structure, a spatial analysis of molecular variance (SAMOVA) was undertaken and species relationships were recovered using a coalescent-based approach. Results indicate complex relationships among the five South American species of Oreobolus, which are likely to have been confounded by incomplete lineage sorting, though hybridization cannot be completely discarded as an influence on genetic patterns, particularly among the northern populations of O. obtusangulus and O. cleefii. We report a case of cryptic speciation in O. obtusangulus where northern and southern populations of morphologically similar individuals are genetically distinct in all analyses. At the population level, the genetic evidence is consistent with contraction and expansion of islands of Páramo vegetation during the climatic fluctuations of the Quaternary, highlighting the role of these processes in shaping modern diversity in that ecosystem. Biogeography (dpeaa)DE-He213 Andes (dpeaa)DE-He213 Species tree (dpeaa)DE-He213 Lineage sorting (dpeaa)DE-He213 Hybridization (dpeaa)DE-He213 Páramo (dpeaa)DE-He213 Pennington, R. Toby aut Neaves, Linda E. aut Milne, Richard I. aut Madriñán, Santiago aut Richardson, James E. (orcid)0000-0001-9014-4865 aut Enthalten in Botanica Helvetica Berlin : Springer, 1981 127(2017), 2 vom: 05. Sept., Seite 155-170 (DE-627)494324775 (DE-600)2196426-9 1420-9063 nnns volume:127 year:2017 number:2 day:05 month:09 pages:155-170 https://dx.doi.org/10.1007/s00035-017-0192-z lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_152 GBV_ILN_161 GBV_ILN_187 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_702 AR 127 2017 2 05 09 155-170
allfieldsSound	10.1007/s00035-017-0192-z doi (DE-627)SPR000627615 (SPR)s00035-017-0192-z-e DE-627 ger DE-627 rakwb eng Gómez-Gutiérrez, María Camila verfasserin aut Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae) 2017 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Swiss Botanical Society 2017 Abstract This study examines genetic relationships among and within the South American species of Oreobolus that span the temperate and tropical Andes hotspots and represent a good case study to investigate diversification in the Páramo. A total of 197 individuals covering the distributional range of most of these species were sequenced for the nuclear ribosomal internal transcribed spacer (ITS) and 118 individuals for three chloroplast DNA regions (trnL-F, trnH-psbA and rpl32-trnL). Haplotype networks and measures of genetic diversity were calculated at different taxonomic and geographic levels. To test for possible geographic structure, a spatial analysis of molecular variance (SAMOVA) was undertaken and species relationships were recovered using a coalescent-based approach. Results indicate complex relationships among the five South American species of Oreobolus, which are likely to have been confounded by incomplete lineage sorting, though hybridization cannot be completely discarded as an influence on genetic patterns, particularly among the northern populations of O. obtusangulus and O. cleefii. We report a case of cryptic speciation in O. obtusangulus where northern and southern populations of morphologically similar individuals are genetically distinct in all analyses. At the population level, the genetic evidence is consistent with contraction and expansion of islands of Páramo vegetation during the climatic fluctuations of the Quaternary, highlighting the role of these processes in shaping modern diversity in that ecosystem. Biogeography (dpeaa)DE-He213 Andes (dpeaa)DE-He213 Species tree (dpeaa)DE-He213 Lineage sorting (dpeaa)DE-He213 Hybridization (dpeaa)DE-He213 Páramo (dpeaa)DE-He213 Pennington, R. Toby aut Neaves, Linda E. aut Milne, Richard I. aut Madriñán, Santiago aut Richardson, James E. (orcid)0000-0001-9014-4865 aut Enthalten in Botanica Helvetica Berlin : Springer, 1981 127(2017), 2 vom: 05. Sept., Seite 155-170 (DE-627)494324775 (DE-600)2196426-9 1420-9063 nnns volume:127 year:2017 number:2 day:05 month:09 pages:155-170 https://dx.doi.org/10.1007/s00035-017-0192-z lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_152 GBV_ILN_161 GBV_ILN_187 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_702 AR 127 2017 2 05 09 155-170
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source	Enthalten in Botanica Helvetica 127(2017), 2 vom: 05. Sept., Seite 155-170 volume:127 year:2017 number:2 day:05 month:09 pages:155-170
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author	Gómez-Gutiérrez, María Camila
spellingShingle	Gómez-Gutiérrez, María Camila misc Biogeography misc Andes misc Species tree misc Lineage sorting misc Hybridization misc Páramo Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae)
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topic_title	Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae) Biogeography (dpeaa)DE-He213 Andes (dpeaa)DE-He213 Species tree (dpeaa)DE-He213 Lineage sorting (dpeaa)DE-He213 Hybridization (dpeaa)DE-He213 Páramo (dpeaa)DE-He213
topic	misc Biogeography misc Andes misc Species tree misc Lineage sorting misc Hybridization misc Páramo
topic_unstemmed	misc Biogeography misc Andes misc Species tree misc Lineage sorting misc Hybridization misc Páramo
topic_browse	misc Biogeography misc Andes misc Species tree misc Lineage sorting misc Hybridization misc Páramo
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title	Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae)
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title_full	Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae)
author_sort	Gómez-Gutiérrez, María Camila
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author_browse	Gómez-Gutiérrez, María Camila Pennington, R. Toby Neaves, Linda E. Milne, Richard I. Madriñán, Santiago Richardson, James E.
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title_sort	genetic diversity in the andes: variation within and between the south american species of oreobolus r. br. (cyperaceae)
title_auth	Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae)
abstract	Abstract This study examines genetic relationships among and within the South American species of Oreobolus that span the temperate and tropical Andes hotspots and represent a good case study to investigate diversification in the Páramo. A total of 197 individuals covering the distributional range of most of these species were sequenced for the nuclear ribosomal internal transcribed spacer (ITS) and 118 individuals for three chloroplast DNA regions (trnL-F, trnH-psbA and rpl32-trnL). Haplotype networks and measures of genetic diversity were calculated at different taxonomic and geographic levels. To test for possible geographic structure, a spatial analysis of molecular variance (SAMOVA) was undertaken and species relationships were recovered using a coalescent-based approach. Results indicate complex relationships among the five South American species of Oreobolus, which are likely to have been confounded by incomplete lineage sorting, though hybridization cannot be completely discarded as an influence on genetic patterns, particularly among the northern populations of O. obtusangulus and O. cleefii. We report a case of cryptic speciation in O. obtusangulus where northern and southern populations of morphologically similar individuals are genetically distinct in all analyses. At the population level, the genetic evidence is consistent with contraction and expansion of islands of Páramo vegetation during the climatic fluctuations of the Quaternary, highlighting the role of these processes in shaping modern diversity in that ecosystem. © Swiss Botanical Society 2017
abstractGer	Abstract This study examines genetic relationships among and within the South American species of Oreobolus that span the temperate and tropical Andes hotspots and represent a good case study to investigate diversification in the Páramo. A total of 197 individuals covering the distributional range of most of these species were sequenced for the nuclear ribosomal internal transcribed spacer (ITS) and 118 individuals for three chloroplast DNA regions (trnL-F, trnH-psbA and rpl32-trnL). Haplotype networks and measures of genetic diversity were calculated at different taxonomic and geographic levels. To test for possible geographic structure, a spatial analysis of molecular variance (SAMOVA) was undertaken and species relationships were recovered using a coalescent-based approach. Results indicate complex relationships among the five South American species of Oreobolus, which are likely to have been confounded by incomplete lineage sorting, though hybridization cannot be completely discarded as an influence on genetic patterns, particularly among the northern populations of O. obtusangulus and O. cleefii. We report a case of cryptic speciation in O. obtusangulus where northern and southern populations of morphologically similar individuals are genetically distinct in all analyses. At the population level, the genetic evidence is consistent with contraction and expansion of islands of Páramo vegetation during the climatic fluctuations of the Quaternary, highlighting the role of these processes in shaping modern diversity in that ecosystem. © Swiss Botanical Society 2017
abstract_unstemmed	Abstract This study examines genetic relationships among and within the South American species of Oreobolus that span the temperate and tropical Andes hotspots and represent a good case study to investigate diversification in the Páramo. A total of 197 individuals covering the distributional range of most of these species were sequenced for the nuclear ribosomal internal transcribed spacer (ITS) and 118 individuals for three chloroplast DNA regions (trnL-F, trnH-psbA and rpl32-trnL). Haplotype networks and measures of genetic diversity were calculated at different taxonomic and geographic levels. To test for possible geographic structure, a spatial analysis of molecular variance (SAMOVA) was undertaken and species relationships were recovered using a coalescent-based approach. Results indicate complex relationships among the five South American species of Oreobolus, which are likely to have been confounded by incomplete lineage sorting, though hybridization cannot be completely discarded as an influence on genetic patterns, particularly among the northern populations of O. obtusangulus and O. cleefii. We report a case of cryptic speciation in O. obtusangulus where northern and southern populations of morphologically similar individuals are genetically distinct in all analyses. At the population level, the genetic evidence is consistent with contraction and expansion of islands of Páramo vegetation during the climatic fluctuations of the Quaternary, highlighting the role of these processes in shaping modern diversity in that ecosystem. © Swiss Botanical Society 2017
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title_short	Genetic diversity in the Andes: variation within and between the South American species of Oreobolus R. Br. (Cyperaceae)
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