Genetic heterogeneity of bovine noroviruses in Italy
Abstract By screening 104 faecal samples from asymptomatic calves in Italy, bovine norovirus RNA was detected with a prevalence rate of 10.5 % (11/104). A continuous sequence spanning the RdRp region and the 5′ end of the capsid gene was generated for 7 of the 11 strains. Upon phylogenetic analysis,...
Ausführliche Beschreibung
Gespeichert in:
| Autor*in: |
Di Martino, Barbara [verfasserIn] Di Profio, Federica [verfasserIn] Di Felice, Elisabetta [verfasserIn] Melegari, Irene [verfasserIn] Ceci, Chiara [verfasserIn] Mauroy, Axel [verfasserIn] Thiry, Etienne [verfasserIn] Martella, Vito [verfasserIn] Marsilio, Fulvio [verfasserIn] |
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| Format: |
E-Artikel |
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| Sprache: |
Englisch |
| Erschienen: |
2014 |
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| Schlagwörter: |
Reverse Transcription Polymerase Chain Reaction |
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| Übergeordnetes Werk: |
Enthalten in: Archives of virology - Wien : Springer, 1939, 159(2014), 10 vom: 14. Mai, Seite 2717-2722 |
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| Übergeordnetes Werk: |
volume:159 ; year:2014 ; number:10 ; day:14 ; month:05 ; pages:2717-2722 |
| Links: |
|---|
| DOI / URN: |
10.1007/s00705-014-2109-0 |
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| Katalog-ID: |
SPR007401876 |
|---|
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| 245 | 1 | 0 | |a Genetic heterogeneity of bovine noroviruses in Italy |
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| 520 | |a Abstract By screening 104 faecal samples from asymptomatic calves in Italy, bovine norovirus RNA was detected with a prevalence rate of 10.5 % (11/104). A continuous sequence spanning the RdRp region and the 5′ end of the capsid gene was generated for 7 of the 11 strains. Upon phylogenetic analysis, five strains were grouped with GIII.2 Newbury2-like viruses, and one strain was grouped with GIII.1 Jena-like noroviruses. Interestingly, one strain (80TE/IT) was genetically related to the GIII.1/Jena/80/De in the RdRp but resembled the GIII.2/Newbury2/76/UK in the capsid gene, suggesting a recombination event occurring in the ORF1/ORF2 junction region. | ||
| 650 | 4 | |a Reverse Transcription Polymerase Chain Reaction |7 (dpeaa)DE-He213 | |
| 650 | 4 | |a Capsid Gene |7 (dpeaa)DE-He213 | |
| 650 | 4 | |a Reverse Transcription Polymerase Chain Reaction Assay |7 (dpeaa)DE-He213 | |
| 650 | 4 | |a RdRp Gene |7 (dpeaa)DE-He213 | |
| 650 | 4 | |a Reverse Transcription Polymerase Chain Reaction Product |7 (dpeaa)DE-He213 | |
| 700 | 1 | |a Di Profio, Federica |e verfasserin |4 aut | |
| 700 | 1 | |a Di Felice, Elisabetta |e verfasserin |4 aut | |
| 700 | 1 | |a Melegari, Irene |e verfasserin |4 aut | |
| 700 | 1 | |a Ceci, Chiara |e verfasserin |4 aut | |
| 700 | 1 | |a Mauroy, Axel |e verfasserin |4 aut | |
| 700 | 1 | |a Thiry, Etienne |e verfasserin |4 aut | |
| 700 | 1 | |a Martella, Vito |e verfasserin |4 aut | |
| 700 | 1 | |a Marsilio, Fulvio |e verfasserin |4 aut | |
| 773 | 0 | 8 | |i Enthalten in |t Archives of virology |d Wien : Springer, 1939 |g 159(2014), 10 vom: 14. Mai, Seite 2717-2722 |w (DE-627)253390168 |w (DE-600)1458460-8 |x 1432-8798 |7 nnns |
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| 912 | |a GBV_ILN_2107 | ||
| 912 | |a GBV_ILN_2108 | ||
| 912 | |a GBV_ILN_2110 | ||
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| 952 | |d 159 |j 2014 |e 10 |b 14 |c 05 |h 2717-2722 | ||
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2014 |
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| allfields |
10.1007/s00705-014-2109-0 doi (DE-627)SPR007401876 (SPR)s00705-014-2109-0-e DE-627 ger DE-627 rakwb eng 610 ASE 42.32 bkl 44.43 bkl Di Martino, Barbara verfasserin aut Genetic heterogeneity of bovine noroviruses in Italy 2014 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract By screening 104 faecal samples from asymptomatic calves in Italy, bovine norovirus RNA was detected with a prevalence rate of 10.5 % (11/104). A continuous sequence spanning the RdRp region and the 5′ end of the capsid gene was generated for 7 of the 11 strains. Upon phylogenetic analysis, five strains were grouped with GIII.2 Newbury2-like viruses, and one strain was grouped with GIII.1 Jena-like noroviruses. Interestingly, one strain (80TE/IT) was genetically related to the GIII.1/Jena/80/De in the RdRp but resembled the GIII.2/Newbury2/76/UK in the capsid gene, suggesting a recombination event occurring in the ORF1/ORF2 junction region. Reverse Transcription Polymerase Chain Reaction (dpeaa)DE-He213 Capsid Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Assay (dpeaa)DE-He213 RdRp Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Product (dpeaa)DE-He213 Di Profio, Federica verfasserin aut Di Felice, Elisabetta verfasserin aut Melegari, Irene verfasserin aut Ceci, Chiara verfasserin aut Mauroy, Axel verfasserin aut Thiry, Etienne verfasserin aut Martella, Vito verfasserin aut Marsilio, Fulvio verfasserin aut Enthalten in Archives of virology Wien : Springer, 1939 159(2014), 10 vom: 14. Mai, Seite 2717-2722 (DE-627)253390168 (DE-600)1458460-8 1432-8798 nnns volume:159 year:2014 number:10 day:14 month:05 pages:2717-2722 https://dx.doi.org/10.1007/s00705-014-2109-0 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_252 GBV_ILN_267 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_711 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.32 ASE 44.43 ASE AR 159 2014 10 14 05 2717-2722 |
| spelling |
10.1007/s00705-014-2109-0 doi (DE-627)SPR007401876 (SPR)s00705-014-2109-0-e DE-627 ger DE-627 rakwb eng 610 ASE 42.32 bkl 44.43 bkl Di Martino, Barbara verfasserin aut Genetic heterogeneity of bovine noroviruses in Italy 2014 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract By screening 104 faecal samples from asymptomatic calves in Italy, bovine norovirus RNA was detected with a prevalence rate of 10.5 % (11/104). A continuous sequence spanning the RdRp region and the 5′ end of the capsid gene was generated for 7 of the 11 strains. Upon phylogenetic analysis, five strains were grouped with GIII.2 Newbury2-like viruses, and one strain was grouped with GIII.1 Jena-like noroviruses. Interestingly, one strain (80TE/IT) was genetically related to the GIII.1/Jena/80/De in the RdRp but resembled the GIII.2/Newbury2/76/UK in the capsid gene, suggesting a recombination event occurring in the ORF1/ORF2 junction region. Reverse Transcription Polymerase Chain Reaction (dpeaa)DE-He213 Capsid Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Assay (dpeaa)DE-He213 RdRp Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Product (dpeaa)DE-He213 Di Profio, Federica verfasserin aut Di Felice, Elisabetta verfasserin aut Melegari, Irene verfasserin aut Ceci, Chiara verfasserin aut Mauroy, Axel verfasserin aut Thiry, Etienne verfasserin aut Martella, Vito verfasserin aut Marsilio, Fulvio verfasserin aut Enthalten in Archives of virology Wien : Springer, 1939 159(2014), 10 vom: 14. Mai, Seite 2717-2722 (DE-627)253390168 (DE-600)1458460-8 1432-8798 nnns volume:159 year:2014 number:10 day:14 month:05 pages:2717-2722 https://dx.doi.org/10.1007/s00705-014-2109-0 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_252 GBV_ILN_267 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_711 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.32 ASE 44.43 ASE AR 159 2014 10 14 05 2717-2722 |
| allfields_unstemmed |
10.1007/s00705-014-2109-0 doi (DE-627)SPR007401876 (SPR)s00705-014-2109-0-e DE-627 ger DE-627 rakwb eng 610 ASE 42.32 bkl 44.43 bkl Di Martino, Barbara verfasserin aut Genetic heterogeneity of bovine noroviruses in Italy 2014 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract By screening 104 faecal samples from asymptomatic calves in Italy, bovine norovirus RNA was detected with a prevalence rate of 10.5 % (11/104). A continuous sequence spanning the RdRp region and the 5′ end of the capsid gene was generated for 7 of the 11 strains. Upon phylogenetic analysis, five strains were grouped with GIII.2 Newbury2-like viruses, and one strain was grouped with GIII.1 Jena-like noroviruses. Interestingly, one strain (80TE/IT) was genetically related to the GIII.1/Jena/80/De in the RdRp but resembled the GIII.2/Newbury2/76/UK in the capsid gene, suggesting a recombination event occurring in the ORF1/ORF2 junction region. Reverse Transcription Polymerase Chain Reaction (dpeaa)DE-He213 Capsid Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Assay (dpeaa)DE-He213 RdRp Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Product (dpeaa)DE-He213 Di Profio, Federica verfasserin aut Di Felice, Elisabetta verfasserin aut Melegari, Irene verfasserin aut Ceci, Chiara verfasserin aut Mauroy, Axel verfasserin aut Thiry, Etienne verfasserin aut Martella, Vito verfasserin aut Marsilio, Fulvio verfasserin aut Enthalten in Archives of virology Wien : Springer, 1939 159(2014), 10 vom: 14. Mai, Seite 2717-2722 (DE-627)253390168 (DE-600)1458460-8 1432-8798 nnns volume:159 year:2014 number:10 day:14 month:05 pages:2717-2722 https://dx.doi.org/10.1007/s00705-014-2109-0 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_252 GBV_ILN_267 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_711 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.32 ASE 44.43 ASE AR 159 2014 10 14 05 2717-2722 |
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10.1007/s00705-014-2109-0 doi (DE-627)SPR007401876 (SPR)s00705-014-2109-0-e DE-627 ger DE-627 rakwb eng 610 ASE 42.32 bkl 44.43 bkl Di Martino, Barbara verfasserin aut Genetic heterogeneity of bovine noroviruses in Italy 2014 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract By screening 104 faecal samples from asymptomatic calves in Italy, bovine norovirus RNA was detected with a prevalence rate of 10.5 % (11/104). A continuous sequence spanning the RdRp region and the 5′ end of the capsid gene was generated for 7 of the 11 strains. Upon phylogenetic analysis, five strains were grouped with GIII.2 Newbury2-like viruses, and one strain was grouped with GIII.1 Jena-like noroviruses. Interestingly, one strain (80TE/IT) was genetically related to the GIII.1/Jena/80/De in the RdRp but resembled the GIII.2/Newbury2/76/UK in the capsid gene, suggesting a recombination event occurring in the ORF1/ORF2 junction region. Reverse Transcription Polymerase Chain Reaction (dpeaa)DE-He213 Capsid Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Assay (dpeaa)DE-He213 RdRp Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Product (dpeaa)DE-He213 Di Profio, Federica verfasserin aut Di Felice, Elisabetta verfasserin aut Melegari, Irene verfasserin aut Ceci, Chiara verfasserin aut Mauroy, Axel verfasserin aut Thiry, Etienne verfasserin aut Martella, Vito verfasserin aut Marsilio, Fulvio verfasserin aut Enthalten in Archives of virology Wien : Springer, 1939 159(2014), 10 vom: 14. Mai, Seite 2717-2722 (DE-627)253390168 (DE-600)1458460-8 1432-8798 nnns volume:159 year:2014 number:10 day:14 month:05 pages:2717-2722 https://dx.doi.org/10.1007/s00705-014-2109-0 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_252 GBV_ILN_267 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_711 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.32 ASE 44.43 ASE AR 159 2014 10 14 05 2717-2722 |
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10.1007/s00705-014-2109-0 doi (DE-627)SPR007401876 (SPR)s00705-014-2109-0-e DE-627 ger DE-627 rakwb eng 610 ASE 42.32 bkl 44.43 bkl Di Martino, Barbara verfasserin aut Genetic heterogeneity of bovine noroviruses in Italy 2014 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract By screening 104 faecal samples from asymptomatic calves in Italy, bovine norovirus RNA was detected with a prevalence rate of 10.5 % (11/104). A continuous sequence spanning the RdRp region and the 5′ end of the capsid gene was generated for 7 of the 11 strains. Upon phylogenetic analysis, five strains were grouped with GIII.2 Newbury2-like viruses, and one strain was grouped with GIII.1 Jena-like noroviruses. Interestingly, one strain (80TE/IT) was genetically related to the GIII.1/Jena/80/De in the RdRp but resembled the GIII.2/Newbury2/76/UK in the capsid gene, suggesting a recombination event occurring in the ORF1/ORF2 junction region. Reverse Transcription Polymerase Chain Reaction (dpeaa)DE-He213 Capsid Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Assay (dpeaa)DE-He213 RdRp Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Product (dpeaa)DE-He213 Di Profio, Federica verfasserin aut Di Felice, Elisabetta verfasserin aut Melegari, Irene verfasserin aut Ceci, Chiara verfasserin aut Mauroy, Axel verfasserin aut Thiry, Etienne verfasserin aut Martella, Vito verfasserin aut Marsilio, Fulvio verfasserin aut Enthalten in Archives of virology Wien : Springer, 1939 159(2014), 10 vom: 14. Mai, Seite 2717-2722 (DE-627)253390168 (DE-600)1458460-8 1432-8798 nnns volume:159 year:2014 number:10 day:14 month:05 pages:2717-2722 https://dx.doi.org/10.1007/s00705-014-2109-0 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_252 GBV_ILN_267 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_711 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.32 ASE 44.43 ASE AR 159 2014 10 14 05 2717-2722 |
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Reverse Transcription Polymerase Chain Reaction Capsid Gene Reverse Transcription Polymerase Chain Reaction Assay RdRp Gene Reverse Transcription Polymerase Chain Reaction Product |
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Di Martino, Barbara @@aut@@ Di Profio, Federica @@aut@@ Di Felice, Elisabetta @@aut@@ Melegari, Irene @@aut@@ Ceci, Chiara @@aut@@ Mauroy, Axel @@aut@@ Thiry, Etienne @@aut@@ Martella, Vito @@aut@@ Marsilio, Fulvio @@aut@@ |
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Di Martino, Barbara |
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Di Martino, Barbara ddc 610 bkl 42.32 bkl 44.43 misc Reverse Transcription Polymerase Chain Reaction misc Capsid Gene misc Reverse Transcription Polymerase Chain Reaction Assay misc RdRp Gene misc Reverse Transcription Polymerase Chain Reaction Product Genetic heterogeneity of bovine noroviruses in Italy |
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610 ASE 42.32 bkl 44.43 bkl Genetic heterogeneity of bovine noroviruses in Italy Reverse Transcription Polymerase Chain Reaction (dpeaa)DE-He213 Capsid Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Assay (dpeaa)DE-He213 RdRp Gene (dpeaa)DE-He213 Reverse Transcription Polymerase Chain Reaction Product (dpeaa)DE-He213 |
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Genetic heterogeneity of bovine noroviruses in Italy |
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Genetic heterogeneity of bovine noroviruses in Italy |
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Di Martino, Barbara Di Profio, Federica Di Felice, Elisabetta Melegari, Irene Ceci, Chiara Mauroy, Axel Thiry, Etienne Martella, Vito Marsilio, Fulvio |
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genetic heterogeneity of bovine noroviruses in italy |
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Genetic heterogeneity of bovine noroviruses in Italy |
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Abstract By screening 104 faecal samples from asymptomatic calves in Italy, bovine norovirus RNA was detected with a prevalence rate of 10.5 % (11/104). A continuous sequence spanning the RdRp region and the 5′ end of the capsid gene was generated for 7 of the 11 strains. Upon phylogenetic analysis, five strains were grouped with GIII.2 Newbury2-like viruses, and one strain was grouped with GIII.1 Jena-like noroviruses. Interestingly, one strain (80TE/IT) was genetically related to the GIII.1/Jena/80/De in the RdRp but resembled the GIII.2/Newbury2/76/UK in the capsid gene, suggesting a recombination event occurring in the ORF1/ORF2 junction region. |
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Abstract By screening 104 faecal samples from asymptomatic calves in Italy, bovine norovirus RNA was detected with a prevalence rate of 10.5 % (11/104). A continuous sequence spanning the RdRp region and the 5′ end of the capsid gene was generated for 7 of the 11 strains. Upon phylogenetic analysis, five strains were grouped with GIII.2 Newbury2-like viruses, and one strain was grouped with GIII.1 Jena-like noroviruses. Interestingly, one strain (80TE/IT) was genetically related to the GIII.1/Jena/80/De in the RdRp but resembled the GIII.2/Newbury2/76/UK in the capsid gene, suggesting a recombination event occurring in the ORF1/ORF2 junction region. |
| abstract_unstemmed |
Abstract By screening 104 faecal samples from asymptomatic calves in Italy, bovine norovirus RNA was detected with a prevalence rate of 10.5 % (11/104). A continuous sequence spanning the RdRp region and the 5′ end of the capsid gene was generated for 7 of the 11 strains. Upon phylogenetic analysis, five strains were grouped with GIII.2 Newbury2-like viruses, and one strain was grouped with GIII.1 Jena-like noroviruses. Interestingly, one strain (80TE/IT) was genetically related to the GIII.1/Jena/80/De in the RdRp but resembled the GIII.2/Newbury2/76/UK in the capsid gene, suggesting a recombination event occurring in the ORF1/ORF2 junction region. |
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Genetic heterogeneity of bovine noroviruses in Italy |
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|
| score |
7.400522 |