Oyster microbial communities and implications for chalky deposit formation

Abstract Although bivalve shell formation is an area of active research, less attention has been paid to mechanisms of precipitation for shell features with unique or unusual crystal morphologies. One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this s...
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Gespeichert in:

Autor*in:	Banker, Roxanne [verfasserIn] Vermeij, Geerat J. [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2018

Schlagwörter:	Chalky deposits 16s rRNA Shell formation

Übergeordnetes Werk:	Enthalten in: Hydrobiologia - Dordrecht [u.a.] : Springer Science + Business Media B.V, 1948, 816(2018), 1 vom: 09. März, Seite 121-135
Übergeordnetes Werk:	volume:816 ; year:2018 ; number:1 ; day:09 ; month:03 ; pages:121-135

Links:	Volltext

DOI / URN:	10.1007/s10750-018-3569-0

Katalog-ID:	SPR012977616

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520			\|a Abstract Although bivalve shell formation is an area of active research, less attention has been paid to mechanisms of precipitation for shell features with unique or unusual crystal morphologies. One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this study was to investigate chalky deposit formation in oysters as a possible case of microbially influenced mineralization by seeking a correlation between the presence of chalky deposits and calcifying bacteria. Extrapallial fluid was collected from specimens of Crassostrea gigas and Ostrea lurida, which do and do not display chalky deposits, respectively. Microbial communities from oyster and seawater samples were characterized and compared using 16S ribosomal RNA gene PCR and sequencing. Results indicate that microbial communities are dominated by the following bacterial phyla: Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Chloroflexi, and Proteobacteria. In addition, seawater is the major source of the microbiome isolated from oyster calcifying fluid. In general, microbial communities in C. gigas are not skewed towards bacterial taxa known for influencing calcium carbonate precipitation in other systems. Although no evidence was found to support a microbial influence on chalk formation, this work provides additional data and insight into the growing body of research on invertebrate microbiomes.
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allfields	10.1007/s10750-018-3569-0 doi (DE-627)SPR012977616 (SPR)s10750-018-3569-0-e DE-627 ger DE-627 rakwb eng 570 ASE 42.92 bkl Banker, Roxanne verfasserin aut Oyster microbial communities and implications for chalky deposit formation 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract Although bivalve shell formation is an area of active research, less attention has been paid to mechanisms of precipitation for shell features with unique or unusual crystal morphologies. One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this study was to investigate chalky deposit formation in oysters as a possible case of microbially influenced mineralization by seeking a correlation between the presence of chalky deposits and calcifying bacteria. Extrapallial fluid was collected from specimens of Crassostrea gigas and Ostrea lurida, which do and do not display chalky deposits, respectively. Microbial communities from oyster and seawater samples were characterized and compared using 16S ribosomal RNA gene PCR and sequencing. Results indicate that microbial communities are dominated by the following bacterial phyla: Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Chloroflexi, and Proteobacteria. In addition, seawater is the major source of the microbiome isolated from oyster calcifying fluid. In general, microbial communities in C. gigas are not skewed towards bacterial taxa known for influencing calcium carbonate precipitation in other systems. Although no evidence was found to support a microbial influence on chalk formation, this work provides additional data and insight into the growing body of research on invertebrate microbiomes. Chalky deposits (dpeaa)DE-He213 16s rRNA (dpeaa)DE-He213 Shell formation (dpeaa)DE-He213 Vermeij, Geerat J. verfasserin aut Enthalten in Hydrobiologia Dordrecht [u.a.] : Springer Science + Business Media B.V, 1948 816(2018), 1 vom: 09. März, Seite 121-135 (DE-627)270929975 (DE-600)1478162-1 1573-5117 nnns volume:816 year:2018 number:1 day:09 month:03 pages:121-135 https://dx.doi.org/10.1007/s10750-018-3569-0 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_381 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2360 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.92 ASE AR 816 2018 1 09 03 121-135
spelling	10.1007/s10750-018-3569-0 doi (DE-627)SPR012977616 (SPR)s10750-018-3569-0-e DE-627 ger DE-627 rakwb eng 570 ASE 42.92 bkl Banker, Roxanne verfasserin aut Oyster microbial communities and implications for chalky deposit formation 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract Although bivalve shell formation is an area of active research, less attention has been paid to mechanisms of precipitation for shell features with unique or unusual crystal morphologies. One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this study was to investigate chalky deposit formation in oysters as a possible case of microbially influenced mineralization by seeking a correlation between the presence of chalky deposits and calcifying bacteria. Extrapallial fluid was collected from specimens of Crassostrea gigas and Ostrea lurida, which do and do not display chalky deposits, respectively. Microbial communities from oyster and seawater samples were characterized and compared using 16S ribosomal RNA gene PCR and sequencing. Results indicate that microbial communities are dominated by the following bacterial phyla: Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Chloroflexi, and Proteobacteria. In addition, seawater is the major source of the microbiome isolated from oyster calcifying fluid. In general, microbial communities in C. gigas are not skewed towards bacterial taxa known for influencing calcium carbonate precipitation in other systems. Although no evidence was found to support a microbial influence on chalk formation, this work provides additional data and insight into the growing body of research on invertebrate microbiomes. Chalky deposits (dpeaa)DE-He213 16s rRNA (dpeaa)DE-He213 Shell formation (dpeaa)DE-He213 Vermeij, Geerat J. verfasserin aut Enthalten in Hydrobiologia Dordrecht [u.a.] : Springer Science + Business Media B.V, 1948 816(2018), 1 vom: 09. März, Seite 121-135 (DE-627)270929975 (DE-600)1478162-1 1573-5117 nnns volume:816 year:2018 number:1 day:09 month:03 pages:121-135 https://dx.doi.org/10.1007/s10750-018-3569-0 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_381 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2360 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.92 ASE AR 816 2018 1 09 03 121-135
allfields_unstemmed	10.1007/s10750-018-3569-0 doi (DE-627)SPR012977616 (SPR)s10750-018-3569-0-e DE-627 ger DE-627 rakwb eng 570 ASE 42.92 bkl Banker, Roxanne verfasserin aut Oyster microbial communities and implications for chalky deposit formation 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract Although bivalve shell formation is an area of active research, less attention has been paid to mechanisms of precipitation for shell features with unique or unusual crystal morphologies. One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this study was to investigate chalky deposit formation in oysters as a possible case of microbially influenced mineralization by seeking a correlation between the presence of chalky deposits and calcifying bacteria. Extrapallial fluid was collected from specimens of Crassostrea gigas and Ostrea lurida, which do and do not display chalky deposits, respectively. Microbial communities from oyster and seawater samples were characterized and compared using 16S ribosomal RNA gene PCR and sequencing. Results indicate that microbial communities are dominated by the following bacterial phyla: Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Chloroflexi, and Proteobacteria. In addition, seawater is the major source of the microbiome isolated from oyster calcifying fluid. In general, microbial communities in C. gigas are not skewed towards bacterial taxa known for influencing calcium carbonate precipitation in other systems. Although no evidence was found to support a microbial influence on chalk formation, this work provides additional data and insight into the growing body of research on invertebrate microbiomes. Chalky deposits (dpeaa)DE-He213 16s rRNA (dpeaa)DE-He213 Shell formation (dpeaa)DE-He213 Vermeij, Geerat J. verfasserin aut Enthalten in Hydrobiologia Dordrecht [u.a.] : Springer Science + Business Media B.V, 1948 816(2018), 1 vom: 09. März, Seite 121-135 (DE-627)270929975 (DE-600)1478162-1 1573-5117 nnns volume:816 year:2018 number:1 day:09 month:03 pages:121-135 https://dx.doi.org/10.1007/s10750-018-3569-0 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_381 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2360 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.92 ASE AR 816 2018 1 09 03 121-135
allfieldsGer	10.1007/s10750-018-3569-0 doi (DE-627)SPR012977616 (SPR)s10750-018-3569-0-e DE-627 ger DE-627 rakwb eng 570 ASE 42.92 bkl Banker, Roxanne verfasserin aut Oyster microbial communities and implications for chalky deposit formation 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract Although bivalve shell formation is an area of active research, less attention has been paid to mechanisms of precipitation for shell features with unique or unusual crystal morphologies. One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this study was to investigate chalky deposit formation in oysters as a possible case of microbially influenced mineralization by seeking a correlation between the presence of chalky deposits and calcifying bacteria. Extrapallial fluid was collected from specimens of Crassostrea gigas and Ostrea lurida, which do and do not display chalky deposits, respectively. Microbial communities from oyster and seawater samples were characterized and compared using 16S ribosomal RNA gene PCR and sequencing. Results indicate that microbial communities are dominated by the following bacterial phyla: Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Chloroflexi, and Proteobacteria. In addition, seawater is the major source of the microbiome isolated from oyster calcifying fluid. In general, microbial communities in C. gigas are not skewed towards bacterial taxa known for influencing calcium carbonate precipitation in other systems. Although no evidence was found to support a microbial influence on chalk formation, this work provides additional data and insight into the growing body of research on invertebrate microbiomes. Chalky deposits (dpeaa)DE-He213 16s rRNA (dpeaa)DE-He213 Shell formation (dpeaa)DE-He213 Vermeij, Geerat J. verfasserin aut Enthalten in Hydrobiologia Dordrecht [u.a.] : Springer Science + Business Media B.V, 1948 816(2018), 1 vom: 09. März, Seite 121-135 (DE-627)270929975 (DE-600)1478162-1 1573-5117 nnns volume:816 year:2018 number:1 day:09 month:03 pages:121-135 https://dx.doi.org/10.1007/s10750-018-3569-0 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_381 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2360 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.92 ASE AR 816 2018 1 09 03 121-135
allfieldsSound	10.1007/s10750-018-3569-0 doi (DE-627)SPR012977616 (SPR)s10750-018-3569-0-e DE-627 ger DE-627 rakwb eng 570 ASE 42.92 bkl Banker, Roxanne verfasserin aut Oyster microbial communities and implications for chalky deposit formation 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract Although bivalve shell formation is an area of active research, less attention has been paid to mechanisms of precipitation for shell features with unique or unusual crystal morphologies. One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this study was to investigate chalky deposit formation in oysters as a possible case of microbially influenced mineralization by seeking a correlation between the presence of chalky deposits and calcifying bacteria. Extrapallial fluid was collected from specimens of Crassostrea gigas and Ostrea lurida, which do and do not display chalky deposits, respectively. Microbial communities from oyster and seawater samples were characterized and compared using 16S ribosomal RNA gene PCR and sequencing. Results indicate that microbial communities are dominated by the following bacterial phyla: Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Chloroflexi, and Proteobacteria. In addition, seawater is the major source of the microbiome isolated from oyster calcifying fluid. In general, microbial communities in C. gigas are not skewed towards bacterial taxa known for influencing calcium carbonate precipitation in other systems. Although no evidence was found to support a microbial influence on chalk formation, this work provides additional data and insight into the growing body of research on invertebrate microbiomes. Chalky deposits (dpeaa)DE-He213 16s rRNA (dpeaa)DE-He213 Shell formation (dpeaa)DE-He213 Vermeij, Geerat J. verfasserin aut Enthalten in Hydrobiologia Dordrecht [u.a.] : Springer Science + Business Media B.V, 1948 816(2018), 1 vom: 09. März, Seite 121-135 (DE-627)270929975 (DE-600)1478162-1 1573-5117 nnns volume:816 year:2018 number:1 day:09 month:03 pages:121-135 https://dx.doi.org/10.1007/s10750-018-3569-0 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_381 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2360 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.92 ASE AR 816 2018 1 09 03 121-135
language	English
source	Enthalten in Hydrobiologia 816(2018), 1 vom: 09. März, Seite 121-135 volume:816 year:2018 number:1 day:09 month:03 pages:121-135
sourceStr	Enthalten in Hydrobiologia 816(2018), 1 vom: 09. März, Seite 121-135 volume:816 year:2018 number:1 day:09 month:03 pages:121-135
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	Chalky deposits 16s rRNA Shell formation
dewey-raw	570
isfreeaccess_bool	false
container_title	Hydrobiologia
authorswithroles_txt_mv	Banker, Roxanne @@aut@@ Vermeij, Geerat J. @@aut@@
publishDateDaySort_date	2018-03-09T00:00:00Z
hierarchy_top_id	270929975
dewey-sort	3570
id	SPR012977616
language_de	englisch
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author	Banker, Roxanne
spellingShingle	Banker, Roxanne ddc 570 bkl 42.92 misc Chalky deposits misc 16s rRNA misc Shell formation Oyster microbial communities and implications for chalky deposit formation
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topic_title	570 ASE 42.92 bkl Oyster microbial communities and implications for chalky deposit formation Chalky deposits (dpeaa)DE-He213 16s rRNA (dpeaa)DE-He213 Shell formation (dpeaa)DE-He213
topic	ddc 570 bkl 42.92 misc Chalky deposits misc 16s rRNA misc Shell formation
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title	Oyster microbial communities and implications for chalky deposit formation
ctrlnum	(DE-627)SPR012977616 (SPR)s10750-018-3569-0-e
title_full	Oyster microbial communities and implications for chalky deposit formation
author_sort	Banker, Roxanne
journal	Hydrobiologia
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author_browse	Banker, Roxanne Vermeij, Geerat J.
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title_sort	oyster microbial communities and implications for chalky deposit formation
title_auth	Oyster microbial communities and implications for chalky deposit formation
abstract	Abstract Although bivalve shell formation is an area of active research, less attention has been paid to mechanisms of precipitation for shell features with unique or unusual crystal morphologies. One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this study was to investigate chalky deposit formation in oysters as a possible case of microbially influenced mineralization by seeking a correlation between the presence of chalky deposits and calcifying bacteria. Extrapallial fluid was collected from specimens of Crassostrea gigas and Ostrea lurida, which do and do not display chalky deposits, respectively. Microbial communities from oyster and seawater samples were characterized and compared using 16S ribosomal RNA gene PCR and sequencing. Results indicate that microbial communities are dominated by the following bacterial phyla: Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Chloroflexi, and Proteobacteria. In addition, seawater is the major source of the microbiome isolated from oyster calcifying fluid. In general, microbial communities in C. gigas are not skewed towards bacterial taxa known for influencing calcium carbonate precipitation in other systems. Although no evidence was found to support a microbial influence on chalk formation, this work provides additional data and insight into the growing body of research on invertebrate microbiomes.
abstractGer	Abstract Although bivalve shell formation is an area of active research, less attention has been paid to mechanisms of precipitation for shell features with unique or unusual crystal morphologies. One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this study was to investigate chalky deposit formation in oysters as a possible case of microbially influenced mineralization by seeking a correlation between the presence of chalky deposits and calcifying bacteria. Extrapallial fluid was collected from specimens of Crassostrea gigas and Ostrea lurida, which do and do not display chalky deposits, respectively. Microbial communities from oyster and seawater samples were characterized and compared using 16S ribosomal RNA gene PCR and sequencing. Results indicate that microbial communities are dominated by the following bacterial phyla: Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Chloroflexi, and Proteobacteria. In addition, seawater is the major source of the microbiome isolated from oyster calcifying fluid. In general, microbial communities in C. gigas are not skewed towards bacterial taxa known for influencing calcium carbonate precipitation in other systems. Although no evidence was found to support a microbial influence on chalk formation, this work provides additional data and insight into the growing body of research on invertebrate microbiomes.
abstract_unstemmed	Abstract Although bivalve shell formation is an area of active research, less attention has been paid to mechanisms of precipitation for shell features with unique or unusual crystal morphologies. One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this study was to investigate chalky deposit formation in oysters as a possible case of microbially influenced mineralization by seeking a correlation between the presence of chalky deposits and calcifying bacteria. Extrapallial fluid was collected from specimens of Crassostrea gigas and Ostrea lurida, which do and do not display chalky deposits, respectively. Microbial communities from oyster and seawater samples were characterized and compared using 16S ribosomal RNA gene PCR and sequencing. Results indicate that microbial communities are dominated by the following bacterial phyla: Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Chloroflexi, and Proteobacteria. In addition, seawater is the major source of the microbiome isolated from oyster calcifying fluid. In general, microbial communities in C. gigas are not skewed towards bacterial taxa known for influencing calcium carbonate precipitation in other systems. Although no evidence was found to support a microbial influence on chalk formation, this work provides additional data and insight into the growing body of research on invertebrate microbiomes.
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title_short	Oyster microbial communities and implications for chalky deposit formation
url	https://dx.doi.org/10.1007/s10750-018-3569-0
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author2	Vermeij, Geerat J.
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doi_str	10.1007/s10750-018-3569-0
up_date	2024-07-03T16:37:10.255Z
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One example is the chalky calcite deposits found in some bivalves, commonly oysters. The goal of this study was to investigate chalky deposit formation in oysters as a possible case of microbially influenced mineralization by seeking a correlation between the presence of chalky deposits and calcifying bacteria. Extrapallial fluid was collected from specimens of Crassostrea gigas and Ostrea lurida, which do and do not display chalky deposits, respectively. Microbial communities from oyster and seawater samples were characterized and compared using 16S ribosomal RNA gene PCR and sequencing. Results indicate that microbial communities are dominated by the following bacterial phyla: Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Chloroflexi, and Proteobacteria. In addition, seawater is the major source of the microbiome isolated from oyster calcifying fluid. 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Oyster microbial communities and implications for chalky deposit formation

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