RETRACTED ARTICLE: The health of things for classification of protein structure using improved grey wolf optimization
Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning cl...
Ausführliche Beschreibung
Gespeichert in:
| Autor*in: |
Sharma, Prerna [verfasserIn] |
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| Format: |
E-Artikel |
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| Sprache: |
Englisch |
| Erschienen: |
2018 |
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| Schlagwörter: |
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| Anmerkung: |
© Springer Science+Business Media, LLC, part of Springer Nature 2018. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. |
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| Übergeordnetes Werk: |
Enthalten in: The journal of supercomputing - Dordrecht [u.a.] : Springer Science + Business Media B.V, 1987, 76(2018), 2 vom: 09. Okt., Seite 1226-1241 |
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| Übergeordnetes Werk: |
volume:76 ; year:2018 ; number:2 ; day:09 ; month:10 ; pages:1226-1241 |
| Links: |
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| DOI / URN: |
10.1007/s11227-018-2639-4 |
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SPR01798792X |
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| 520 | |a Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning classification models are studied with six physical and chemical properties to classify the root mean square deviation of the protein structure. This work proposes an improved version of a meta-heuristic technique named grey wolf optimization (IGWO), which is an extension of traditional grey wolf optimization (GWO) for the feature selection. The proposed novel IGWO ascertains optimal subset of features, and further, four machine learning classifiers have been used for efficient prediction of protein structure. Artificial neural network classifier predicts the protein structure with a maximum approximate accuracy of 91%. The experimental result reveals that the proposed meta-heuristic technique is stable enough to maximize the accuracy and minimize the number of optimal features. In this paper, the result of the proposed technique has been compared with other related evolutionary techniques and the proposed optimizer outperforms all other techniques. The dataset used in the study is available at http://bit.ly/RMSDClassification-DS. | ||
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| 650 | 4 | |a Feature selection |7 (dpeaa)DE-He213 | |
| 650 | 4 | |a Grey wolf optimizer |7 (dpeaa)DE-He213 | |
| 650 | 4 | |a Improved grey wolf optimization |7 (dpeaa)DE-He213 | |
| 650 | 4 | |a Artificial neural networks |7 (dpeaa)DE-He213 | |
| 700 | 1 | |a Gupta, Apoorva |4 aut | |
| 700 | 1 | |a Aggarwal, Aastha |4 aut | |
| 700 | 1 | |a Gupta, Deepak |4 aut | |
| 700 | 1 | |a Khanna, Ashish |4 aut | |
| 700 | 1 | |a Hassanien, Aboul Ella |4 aut | |
| 700 | 1 | |a de Albuquerque, Victor Hugo C. |4 aut | |
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10.1007/s11227-018-2639-4 doi (DE-627)SPR01798792X (SPR)s11227-018-2639-4-e DE-627 ger DE-627 rakwb eng Sharma, Prerna verfasserin aut RETRACTED ARTICLE: The health of things for classification of protein structure using improved grey wolf optimization 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Springer Science+Business Media, LLC, part of Springer Nature 2018. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning classification models are studied with six physical and chemical properties to classify the root mean square deviation of the protein structure. This work proposes an improved version of a meta-heuristic technique named grey wolf optimization (IGWO), which is an extension of traditional grey wolf optimization (GWO) for the feature selection. The proposed novel IGWO ascertains optimal subset of features, and further, four machine learning classifiers have been used for efficient prediction of protein structure. Artificial neural network classifier predicts the protein structure with a maximum approximate accuracy of 91%. The experimental result reveals that the proposed meta-heuristic technique is stable enough to maximize the accuracy and minimize the number of optimal features. In this paper, the result of the proposed technique has been compared with other related evolutionary techniques and the proposed optimizer outperforms all other techniques. The dataset used in the study is available at http://bit.ly/RMSDClassification-DS. Protein structure (dpeaa)DE-He213 Feature selection (dpeaa)DE-He213 Grey wolf optimizer (dpeaa)DE-He213 Improved grey wolf optimization (dpeaa)DE-He213 Artificial neural networks (dpeaa)DE-He213 Gupta, Apoorva aut Aggarwal, Aastha aut Gupta, Deepak aut Khanna, Ashish aut Hassanien, Aboul Ella aut de Albuquerque, Victor Hugo C. aut Enthalten in The journal of supercomputing Dordrecht [u.a.] : Springer Science + Business Media B.V, 1987 76(2018), 2 vom: 09. Okt., Seite 1226-1241 (DE-627)271350202 (DE-600)1479917-0 1573-0484 nnns volume:76 year:2018 number:2 day:09 month:10 pages:1226-1241 https://dx.doi.org/10.1007/s11227-018-2639-4 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 76 2018 2 09 10 1226-1241 |
| spelling |
10.1007/s11227-018-2639-4 doi (DE-627)SPR01798792X (SPR)s11227-018-2639-4-e DE-627 ger DE-627 rakwb eng Sharma, Prerna verfasserin aut RETRACTED ARTICLE: The health of things for classification of protein structure using improved grey wolf optimization 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Springer Science+Business Media, LLC, part of Springer Nature 2018. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning classification models are studied with six physical and chemical properties to classify the root mean square deviation of the protein structure. This work proposes an improved version of a meta-heuristic technique named grey wolf optimization (IGWO), which is an extension of traditional grey wolf optimization (GWO) for the feature selection. The proposed novel IGWO ascertains optimal subset of features, and further, four machine learning classifiers have been used for efficient prediction of protein structure. Artificial neural network classifier predicts the protein structure with a maximum approximate accuracy of 91%. The experimental result reveals that the proposed meta-heuristic technique is stable enough to maximize the accuracy and minimize the number of optimal features. In this paper, the result of the proposed technique has been compared with other related evolutionary techniques and the proposed optimizer outperforms all other techniques. The dataset used in the study is available at http://bit.ly/RMSDClassification-DS. Protein structure (dpeaa)DE-He213 Feature selection (dpeaa)DE-He213 Grey wolf optimizer (dpeaa)DE-He213 Improved grey wolf optimization (dpeaa)DE-He213 Artificial neural networks (dpeaa)DE-He213 Gupta, Apoorva aut Aggarwal, Aastha aut Gupta, Deepak aut Khanna, Ashish aut Hassanien, Aboul Ella aut de Albuquerque, Victor Hugo C. aut Enthalten in The journal of supercomputing Dordrecht [u.a.] : Springer Science + Business Media B.V, 1987 76(2018), 2 vom: 09. Okt., Seite 1226-1241 (DE-627)271350202 (DE-600)1479917-0 1573-0484 nnns volume:76 year:2018 number:2 day:09 month:10 pages:1226-1241 https://dx.doi.org/10.1007/s11227-018-2639-4 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 76 2018 2 09 10 1226-1241 |
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10.1007/s11227-018-2639-4 doi (DE-627)SPR01798792X (SPR)s11227-018-2639-4-e DE-627 ger DE-627 rakwb eng Sharma, Prerna verfasserin aut RETRACTED ARTICLE: The health of things for classification of protein structure using improved grey wolf optimization 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Springer Science+Business Media, LLC, part of Springer Nature 2018. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning classification models are studied with six physical and chemical properties to classify the root mean square deviation of the protein structure. This work proposes an improved version of a meta-heuristic technique named grey wolf optimization (IGWO), which is an extension of traditional grey wolf optimization (GWO) for the feature selection. The proposed novel IGWO ascertains optimal subset of features, and further, four machine learning classifiers have been used for efficient prediction of protein structure. Artificial neural network classifier predicts the protein structure with a maximum approximate accuracy of 91%. The experimental result reveals that the proposed meta-heuristic technique is stable enough to maximize the accuracy and minimize the number of optimal features. In this paper, the result of the proposed technique has been compared with other related evolutionary techniques and the proposed optimizer outperforms all other techniques. The dataset used in the study is available at http://bit.ly/RMSDClassification-DS. Protein structure (dpeaa)DE-He213 Feature selection (dpeaa)DE-He213 Grey wolf optimizer (dpeaa)DE-He213 Improved grey wolf optimization (dpeaa)DE-He213 Artificial neural networks (dpeaa)DE-He213 Gupta, Apoorva aut Aggarwal, Aastha aut Gupta, Deepak aut Khanna, Ashish aut Hassanien, Aboul Ella aut de Albuquerque, Victor Hugo C. aut Enthalten in The journal of supercomputing Dordrecht [u.a.] : Springer Science + Business Media B.V, 1987 76(2018), 2 vom: 09. Okt., Seite 1226-1241 (DE-627)271350202 (DE-600)1479917-0 1573-0484 nnns volume:76 year:2018 number:2 day:09 month:10 pages:1226-1241 https://dx.doi.org/10.1007/s11227-018-2639-4 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 76 2018 2 09 10 1226-1241 |
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10.1007/s11227-018-2639-4 doi (DE-627)SPR01798792X (SPR)s11227-018-2639-4-e DE-627 ger DE-627 rakwb eng Sharma, Prerna verfasserin aut RETRACTED ARTICLE: The health of things for classification of protein structure using improved grey wolf optimization 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Springer Science+Business Media, LLC, part of Springer Nature 2018. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning classification models are studied with six physical and chemical properties to classify the root mean square deviation of the protein structure. This work proposes an improved version of a meta-heuristic technique named grey wolf optimization (IGWO), which is an extension of traditional grey wolf optimization (GWO) for the feature selection. The proposed novel IGWO ascertains optimal subset of features, and further, four machine learning classifiers have been used for efficient prediction of protein structure. Artificial neural network classifier predicts the protein structure with a maximum approximate accuracy of 91%. The experimental result reveals that the proposed meta-heuristic technique is stable enough to maximize the accuracy and minimize the number of optimal features. In this paper, the result of the proposed technique has been compared with other related evolutionary techniques and the proposed optimizer outperforms all other techniques. The dataset used in the study is available at http://bit.ly/RMSDClassification-DS. Protein structure (dpeaa)DE-He213 Feature selection (dpeaa)DE-He213 Grey wolf optimizer (dpeaa)DE-He213 Improved grey wolf optimization (dpeaa)DE-He213 Artificial neural networks (dpeaa)DE-He213 Gupta, Apoorva aut Aggarwal, Aastha aut Gupta, Deepak aut Khanna, Ashish aut Hassanien, Aboul Ella aut de Albuquerque, Victor Hugo C. aut Enthalten in The journal of supercomputing Dordrecht [u.a.] : Springer Science + Business Media B.V, 1987 76(2018), 2 vom: 09. Okt., Seite 1226-1241 (DE-627)271350202 (DE-600)1479917-0 1573-0484 nnns volume:76 year:2018 number:2 day:09 month:10 pages:1226-1241 https://dx.doi.org/10.1007/s11227-018-2639-4 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 76 2018 2 09 10 1226-1241 |
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10.1007/s11227-018-2639-4 doi (DE-627)SPR01798792X (SPR)s11227-018-2639-4-e DE-627 ger DE-627 rakwb eng Sharma, Prerna verfasserin aut RETRACTED ARTICLE: The health of things for classification of protein structure using improved grey wolf optimization 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Springer Science+Business Media, LLC, part of Springer Nature 2018. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning classification models are studied with six physical and chemical properties to classify the root mean square deviation of the protein structure. This work proposes an improved version of a meta-heuristic technique named grey wolf optimization (IGWO), which is an extension of traditional grey wolf optimization (GWO) for the feature selection. The proposed novel IGWO ascertains optimal subset of features, and further, four machine learning classifiers have been used for efficient prediction of protein structure. Artificial neural network classifier predicts the protein structure with a maximum approximate accuracy of 91%. The experimental result reveals that the proposed meta-heuristic technique is stable enough to maximize the accuracy and minimize the number of optimal features. In this paper, the result of the proposed technique has been compared with other related evolutionary techniques and the proposed optimizer outperforms all other techniques. The dataset used in the study is available at http://bit.ly/RMSDClassification-DS. Protein structure (dpeaa)DE-He213 Feature selection (dpeaa)DE-He213 Grey wolf optimizer (dpeaa)DE-He213 Improved grey wolf optimization (dpeaa)DE-He213 Artificial neural networks (dpeaa)DE-He213 Gupta, Apoorva aut Aggarwal, Aastha aut Gupta, Deepak aut Khanna, Ashish aut Hassanien, Aboul Ella aut de Albuquerque, Victor Hugo C. aut Enthalten in The journal of supercomputing Dordrecht [u.a.] : Springer Science + Business Media B.V, 1987 76(2018), 2 vom: 09. Okt., Seite 1226-1241 (DE-627)271350202 (DE-600)1479917-0 1573-0484 nnns volume:76 year:2018 number:2 day:09 month:10 pages:1226-1241 https://dx.doi.org/10.1007/s11227-018-2639-4 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_206 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 76 2018 2 09 10 1226-1241 |
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Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</subfield></datafield><datafield tag="520" ind1=" " ind2=" "><subfield code="a">Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning classification models are studied with six physical and chemical properties to classify the root mean square deviation of the protein structure. This work proposes an improved version of a meta-heuristic technique named grey wolf optimization (IGWO), which is an extension of traditional grey wolf optimization (GWO) for the feature selection. The proposed novel IGWO ascertains optimal subset of features, and further, four machine learning classifiers have been used for efficient prediction of protein structure. Artificial neural network classifier predicts the protein structure with a maximum approximate accuracy of 91%. The experimental result reveals that the proposed meta-heuristic technique is stable enough to maximize the accuracy and minimize the number of optimal features. In this paper, the result of the proposed technique has been compared with other related evolutionary techniques and the proposed optimizer outperforms all other techniques. 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retracted article: the health of things for classification of protein structure using improved grey wolf optimization |
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RETRACTED ARTICLE: The health of things for classification of protein structure using improved grey wolf optimization |
| abstract |
Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning classification models are studied with six physical and chemical properties to classify the root mean square deviation of the protein structure. This work proposes an improved version of a meta-heuristic technique named grey wolf optimization (IGWO), which is an extension of traditional grey wolf optimization (GWO) for the feature selection. The proposed novel IGWO ascertains optimal subset of features, and further, four machine learning classifiers have been used for efficient prediction of protein structure. Artificial neural network classifier predicts the protein structure with a maximum approximate accuracy of 91%. The experimental result reveals that the proposed meta-heuristic technique is stable enough to maximize the accuracy and minimize the number of optimal features. In this paper, the result of the proposed technique has been compared with other related evolutionary techniques and the proposed optimizer outperforms all other techniques. The dataset used in the study is available at http://bit.ly/RMSDClassification-DS. © Springer Science+Business Media, LLC, part of Springer Nature 2018. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. |
| abstractGer |
Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning classification models are studied with six physical and chemical properties to classify the root mean square deviation of the protein structure. This work proposes an improved version of a meta-heuristic technique named grey wolf optimization (IGWO), which is an extension of traditional grey wolf optimization (GWO) for the feature selection. The proposed novel IGWO ascertains optimal subset of features, and further, four machine learning classifiers have been used for efficient prediction of protein structure. Artificial neural network classifier predicts the protein structure with a maximum approximate accuracy of 91%. The experimental result reveals that the proposed meta-heuristic technique is stable enough to maximize the accuracy and minimize the number of optimal features. In this paper, the result of the proposed technique has been compared with other related evolutionary techniques and the proposed optimizer outperforms all other techniques. The dataset used in the study is available at http://bit.ly/RMSDClassification-DS. © Springer Science+Business Media, LLC, part of Springer Nature 2018. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. |
| abstract_unstemmed |
Abstract In the field of computational biology, prediction of high-resolution protein structure is regarded as a major challenge. Physical and chemical properties of the protein structure determine its quality and differentiate native structures from predicted structures. Various machine learning classification models are studied with six physical and chemical properties to classify the root mean square deviation of the protein structure. This work proposes an improved version of a meta-heuristic technique named grey wolf optimization (IGWO), which is an extension of traditional grey wolf optimization (GWO) for the feature selection. The proposed novel IGWO ascertains optimal subset of features, and further, four machine learning classifiers have been used for efficient prediction of protein structure. Artificial neural network classifier predicts the protein structure with a maximum approximate accuracy of 91%. The experimental result reveals that the proposed meta-heuristic technique is stable enough to maximize the accuracy and minimize the number of optimal features. In this paper, the result of the proposed technique has been compared with other related evolutionary techniques and the proposed optimizer outperforms all other techniques. The dataset used in the study is available at http://bit.ly/RMSDClassification-DS. © Springer Science+Business Media, LLC, part of Springer Nature 2018. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. |
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| title_short |
RETRACTED ARTICLE: The health of things for classification of protein structure using improved grey wolf optimization |
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https://dx.doi.org/10.1007/s11227-018-2639-4 |
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Gupta, Apoorva Aggarwal, Aastha Gupta, Deepak Khanna, Ashish Hassanien, Aboul Ella de Albuquerque, Victor Hugo C. |
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Gupta, Apoorva Aggarwal, Aastha Gupta, Deepak Khanna, Ashish Hassanien, Aboul Ella de Albuquerque, Victor Hugo C. |
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10.1007/s11227-018-2639-4 |
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| score |
7.400462 |