Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP
Abstract Edible banana and plantains of the Musa genus are important staple food crops cultivated in humid tropical and subtropical climatic zones. These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase...
Ausführliche Beschreibung
Autor*in: |
Valdez-Ojeda, Ruby [verfasserIn] James-Kay, Andrew [verfasserIn] Ku-Cauich, José Roberto [verfasserIn] Escobedo-GraciaMedrano, Rosa María [verfasserIn] |
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Format: |
E-Artikel |
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Sprache: |
Englisch |
Erschienen: |
2014 |
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Schlagwörter: |
Sequence-related amplified polymorphism (SRAP) molecular marker |
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Übergeordnetes Werk: |
Enthalten in: Tree genetics & genomes - Berlin : Springer, 2005, 10(2014), 3 vom: 07. Feb., Seite 465-476 |
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Übergeordnetes Werk: |
volume:10 ; year:2014 ; number:3 ; day:07 ; month:02 ; pages:465-476 |
Links: |
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DOI / URN: |
10.1007/s11295-013-0694-9 |
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Katalog-ID: |
SPR018670113 |
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520 | |a Abstract Edible banana and plantains of the Musa genus are important staple food crops cultivated in humid tropical and subtropical climatic zones. These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase the genetic variability of available cultivars, indexed accessions have been introduced into a regional collection in southeastern Mexico, through the Banana Bioversity International Program. The aim of this study was to use the fluorescently labeled sequence-related amplified polymorphism (SRAP) molecular marker system to characterize the genetic variability within 71 accessions of the existing collection and resolved uncertainties for the better management of the collection, as a preliminary step to establishing a breeding program. These accessions, which included wild species and cultivars of different subgroups, were consistently identified and separated by SRAP markers. A total of 330 polymorphic bands were detected using 12 primer combinations. The average number of polymorphic bands per primer pair was 27.5. The genetic similarity between accessions ranged between 0.44 and 0.97, as estimated using Jaccard's coefficient. Moreover, SRAP marker system probed to be useful to identify closely related accessions in the genus Musa and facilitated the recognition of duplicates to be eliminated and clarified uncertainties or mislabeled banana accessions introduced to the collection. | ||
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700 | 1 | |a Ku-Cauich, José Roberto |e verfasserin |4 aut | |
700 | 1 | |a Escobedo-GraciaMedrano, Rosa María |e verfasserin |4 aut | |
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10.1007/s11295-013-0694-9 doi (DE-627)SPR018670113 (SPR)s11295-013-0694-9-e DE-627 ger DE-627 rakwb eng 580 ASE 42.43 bkl Valdez-Ojeda, Ruby verfasserin aut Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP 2014 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract Edible banana and plantains of the Musa genus are important staple food crops cultivated in humid tropical and subtropical climatic zones. These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase the genetic variability of available cultivars, indexed accessions have been introduced into a regional collection in southeastern Mexico, through the Banana Bioversity International Program. The aim of this study was to use the fluorescently labeled sequence-related amplified polymorphism (SRAP) molecular marker system to characterize the genetic variability within 71 accessions of the existing collection and resolved uncertainties for the better management of the collection, as a preliminary step to establishing a breeding program. These accessions, which included wild species and cultivars of different subgroups, were consistently identified and separated by SRAP markers. A total of 330 polymorphic bands were detected using 12 primer combinations. The average number of polymorphic bands per primer pair was 27.5. The genetic similarity between accessions ranged between 0.44 and 0.97, as estimated using Jaccard's coefficient. Moreover, SRAP marker system probed to be useful to identify closely related accessions in the genus Musa and facilitated the recognition of duplicates to be eliminated and clarified uncertainties or mislabeled banana accessions introduced to the collection. Banana (dpeaa)DE-He213 Genetic variation (dpeaa)DE-He213 Genetic polymorphism (dpeaa)DE-He213 Sequence-related amplified polymorphism (SRAP) molecular marker (dpeaa)DE-He213 James-Kay, Andrew verfasserin aut Ku-Cauich, José Roberto verfasserin aut Escobedo-GraciaMedrano, Rosa María verfasserin aut Enthalten in Tree genetics & genomes Berlin : Springer, 2005 10(2014), 3 vom: 07. Feb., Seite 465-476 (DE-627)481907769 (DE-600)2180926-4 1614-2950 nnns volume:10 year:2014 number:3 day:07 month:02 pages:465-476 https://dx.doi.org/10.1007/s11295-013-0694-9 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2018 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4277 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.43 ASE AR 10 2014 3 07 02 465-476 |
spelling |
10.1007/s11295-013-0694-9 doi (DE-627)SPR018670113 (SPR)s11295-013-0694-9-e DE-627 ger DE-627 rakwb eng 580 ASE 42.43 bkl Valdez-Ojeda, Ruby verfasserin aut Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP 2014 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract Edible banana and plantains of the Musa genus are important staple food crops cultivated in humid tropical and subtropical climatic zones. These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase the genetic variability of available cultivars, indexed accessions have been introduced into a regional collection in southeastern Mexico, through the Banana Bioversity International Program. The aim of this study was to use the fluorescently labeled sequence-related amplified polymorphism (SRAP) molecular marker system to characterize the genetic variability within 71 accessions of the existing collection and resolved uncertainties for the better management of the collection, as a preliminary step to establishing a breeding program. These accessions, which included wild species and cultivars of different subgroups, were consistently identified and separated by SRAP markers. A total of 330 polymorphic bands were detected using 12 primer combinations. The average number of polymorphic bands per primer pair was 27.5. The genetic similarity between accessions ranged between 0.44 and 0.97, as estimated using Jaccard's coefficient. Moreover, SRAP marker system probed to be useful to identify closely related accessions in the genus Musa and facilitated the recognition of duplicates to be eliminated and clarified uncertainties or mislabeled banana accessions introduced to the collection. Banana (dpeaa)DE-He213 Genetic variation (dpeaa)DE-He213 Genetic polymorphism (dpeaa)DE-He213 Sequence-related amplified polymorphism (SRAP) molecular marker (dpeaa)DE-He213 James-Kay, Andrew verfasserin aut Ku-Cauich, José Roberto verfasserin aut Escobedo-GraciaMedrano, Rosa María verfasserin aut Enthalten in Tree genetics & genomes Berlin : Springer, 2005 10(2014), 3 vom: 07. Feb., Seite 465-476 (DE-627)481907769 (DE-600)2180926-4 1614-2950 nnns volume:10 year:2014 number:3 day:07 month:02 pages:465-476 https://dx.doi.org/10.1007/s11295-013-0694-9 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2018 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4277 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.43 ASE AR 10 2014 3 07 02 465-476 |
allfields_unstemmed |
10.1007/s11295-013-0694-9 doi (DE-627)SPR018670113 (SPR)s11295-013-0694-9-e DE-627 ger DE-627 rakwb eng 580 ASE 42.43 bkl Valdez-Ojeda, Ruby verfasserin aut Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP 2014 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract Edible banana and plantains of the Musa genus are important staple food crops cultivated in humid tropical and subtropical climatic zones. These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase the genetic variability of available cultivars, indexed accessions have been introduced into a regional collection in southeastern Mexico, through the Banana Bioversity International Program. The aim of this study was to use the fluorescently labeled sequence-related amplified polymorphism (SRAP) molecular marker system to characterize the genetic variability within 71 accessions of the existing collection and resolved uncertainties for the better management of the collection, as a preliminary step to establishing a breeding program. These accessions, which included wild species and cultivars of different subgroups, were consistently identified and separated by SRAP markers. A total of 330 polymorphic bands were detected using 12 primer combinations. The average number of polymorphic bands per primer pair was 27.5. The genetic similarity between accessions ranged between 0.44 and 0.97, as estimated using Jaccard's coefficient. Moreover, SRAP marker system probed to be useful to identify closely related accessions in the genus Musa and facilitated the recognition of duplicates to be eliminated and clarified uncertainties or mislabeled banana accessions introduced to the collection. Banana (dpeaa)DE-He213 Genetic variation (dpeaa)DE-He213 Genetic polymorphism (dpeaa)DE-He213 Sequence-related amplified polymorphism (SRAP) molecular marker (dpeaa)DE-He213 James-Kay, Andrew verfasserin aut Ku-Cauich, José Roberto verfasserin aut Escobedo-GraciaMedrano, Rosa María verfasserin aut Enthalten in Tree genetics & genomes Berlin : Springer, 2005 10(2014), 3 vom: 07. Feb., Seite 465-476 (DE-627)481907769 (DE-600)2180926-4 1614-2950 nnns volume:10 year:2014 number:3 day:07 month:02 pages:465-476 https://dx.doi.org/10.1007/s11295-013-0694-9 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2018 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4277 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.43 ASE AR 10 2014 3 07 02 465-476 |
allfieldsGer |
10.1007/s11295-013-0694-9 doi (DE-627)SPR018670113 (SPR)s11295-013-0694-9-e DE-627 ger DE-627 rakwb eng 580 ASE 42.43 bkl Valdez-Ojeda, Ruby verfasserin aut Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP 2014 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract Edible banana and plantains of the Musa genus are important staple food crops cultivated in humid tropical and subtropical climatic zones. These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase the genetic variability of available cultivars, indexed accessions have been introduced into a regional collection in southeastern Mexico, through the Banana Bioversity International Program. The aim of this study was to use the fluorescently labeled sequence-related amplified polymorphism (SRAP) molecular marker system to characterize the genetic variability within 71 accessions of the existing collection and resolved uncertainties for the better management of the collection, as a preliminary step to establishing a breeding program. These accessions, which included wild species and cultivars of different subgroups, were consistently identified and separated by SRAP markers. A total of 330 polymorphic bands were detected using 12 primer combinations. The average number of polymorphic bands per primer pair was 27.5. The genetic similarity between accessions ranged between 0.44 and 0.97, as estimated using Jaccard's coefficient. Moreover, SRAP marker system probed to be useful to identify closely related accessions in the genus Musa and facilitated the recognition of duplicates to be eliminated and clarified uncertainties or mislabeled banana accessions introduced to the collection. Banana (dpeaa)DE-He213 Genetic variation (dpeaa)DE-He213 Genetic polymorphism (dpeaa)DE-He213 Sequence-related amplified polymorphism (SRAP) molecular marker (dpeaa)DE-He213 James-Kay, Andrew verfasserin aut Ku-Cauich, José Roberto verfasserin aut Escobedo-GraciaMedrano, Rosa María verfasserin aut Enthalten in Tree genetics & genomes Berlin : Springer, 2005 10(2014), 3 vom: 07. Feb., Seite 465-476 (DE-627)481907769 (DE-600)2180926-4 1614-2950 nnns volume:10 year:2014 number:3 day:07 month:02 pages:465-476 https://dx.doi.org/10.1007/s11295-013-0694-9 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2018 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4277 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.43 ASE AR 10 2014 3 07 02 465-476 |
allfieldsSound |
10.1007/s11295-013-0694-9 doi (DE-627)SPR018670113 (SPR)s11295-013-0694-9-e DE-627 ger DE-627 rakwb eng 580 ASE 42.43 bkl Valdez-Ojeda, Ruby verfasserin aut Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP 2014 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract Edible banana and plantains of the Musa genus are important staple food crops cultivated in humid tropical and subtropical climatic zones. These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase the genetic variability of available cultivars, indexed accessions have been introduced into a regional collection in southeastern Mexico, through the Banana Bioversity International Program. The aim of this study was to use the fluorescently labeled sequence-related amplified polymorphism (SRAP) molecular marker system to characterize the genetic variability within 71 accessions of the existing collection and resolved uncertainties for the better management of the collection, as a preliminary step to establishing a breeding program. These accessions, which included wild species and cultivars of different subgroups, were consistently identified and separated by SRAP markers. A total of 330 polymorphic bands were detected using 12 primer combinations. The average number of polymorphic bands per primer pair was 27.5. The genetic similarity between accessions ranged between 0.44 and 0.97, as estimated using Jaccard's coefficient. Moreover, SRAP marker system probed to be useful to identify closely related accessions in the genus Musa and facilitated the recognition of duplicates to be eliminated and clarified uncertainties or mislabeled banana accessions introduced to the collection. Banana (dpeaa)DE-He213 Genetic variation (dpeaa)DE-He213 Genetic polymorphism (dpeaa)DE-He213 Sequence-related amplified polymorphism (SRAP) molecular marker (dpeaa)DE-He213 James-Kay, Andrew verfasserin aut Ku-Cauich, José Roberto verfasserin aut Escobedo-GraciaMedrano, Rosa María verfasserin aut Enthalten in Tree genetics & genomes Berlin : Springer, 2005 10(2014), 3 vom: 07. Feb., Seite 465-476 (DE-627)481907769 (DE-600)2180926-4 1614-2950 nnns volume:10 year:2014 number:3 day:07 month:02 pages:465-476 https://dx.doi.org/10.1007/s11295-013-0694-9 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2018 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4277 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 42.43 ASE AR 10 2014 3 07 02 465-476 |
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Enthalten in Tree genetics & genomes 10(2014), 3 vom: 07. Feb., Seite 465-476 volume:10 year:2014 number:3 day:07 month:02 pages:465-476 |
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Banana Genetic variation Genetic polymorphism Sequence-related amplified polymorphism (SRAP) molecular marker |
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Valdez-Ojeda, Ruby @@aut@@ James-Kay, Andrew @@aut@@ Ku-Cauich, José Roberto @@aut@@ Escobedo-GraciaMedrano, Rosa María @@aut@@ |
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These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase the genetic variability of available cultivars, indexed accessions have been introduced into a regional collection in southeastern Mexico, through the Banana Bioversity International Program. The aim of this study was to use the fluorescently labeled sequence-related amplified polymorphism (SRAP) molecular marker system to characterize the genetic variability within 71 accessions of the existing collection and resolved uncertainties for the better management of the collection, as a preliminary step to establishing a breeding program. These accessions, which included wild species and cultivars of different subgroups, were consistently identified and separated by SRAP markers. A total of 330 polymorphic bands were detected using 12 primer combinations. The average number of polymorphic bands per primer pair was 27.5. 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Valdez-Ojeda, Ruby |
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Valdez-Ojeda, Ruby ddc 580 bkl 42.43 misc Banana misc Genetic variation misc Genetic polymorphism misc Sequence-related amplified polymorphism (SRAP) molecular marker Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP |
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580 ASE 42.43 bkl Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP Banana (dpeaa)DE-He213 Genetic variation (dpeaa)DE-He213 Genetic polymorphism (dpeaa)DE-He213 Sequence-related amplified polymorphism (SRAP) molecular marker (dpeaa)DE-He213 |
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ddc 580 bkl 42.43 misc Banana misc Genetic variation misc Genetic polymorphism misc Sequence-related amplified polymorphism (SRAP) molecular marker |
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Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP |
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Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP |
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Valdez-Ojeda, Ruby James-Kay, Andrew Ku-Cauich, José Roberto Escobedo-GraciaMedrano, Rosa María |
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genetic relationships among a collection of musa germplasm by fluorescent-labeled srap |
title_auth |
Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP |
abstract |
Abstract Edible banana and plantains of the Musa genus are important staple food crops cultivated in humid tropical and subtropical climatic zones. These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase the genetic variability of available cultivars, indexed accessions have been introduced into a regional collection in southeastern Mexico, through the Banana Bioversity International Program. The aim of this study was to use the fluorescently labeled sequence-related amplified polymorphism (SRAP) molecular marker system to characterize the genetic variability within 71 accessions of the existing collection and resolved uncertainties for the better management of the collection, as a preliminary step to establishing a breeding program. These accessions, which included wild species and cultivars of different subgroups, were consistently identified and separated by SRAP markers. A total of 330 polymorphic bands were detected using 12 primer combinations. The average number of polymorphic bands per primer pair was 27.5. The genetic similarity between accessions ranged between 0.44 and 0.97, as estimated using Jaccard's coefficient. Moreover, SRAP marker system probed to be useful to identify closely related accessions in the genus Musa and facilitated the recognition of duplicates to be eliminated and clarified uncertainties or mislabeled banana accessions introduced to the collection. |
abstractGer |
Abstract Edible banana and plantains of the Musa genus are important staple food crops cultivated in humid tropical and subtropical climatic zones. These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase the genetic variability of available cultivars, indexed accessions have been introduced into a regional collection in southeastern Mexico, through the Banana Bioversity International Program. The aim of this study was to use the fluorescently labeled sequence-related amplified polymorphism (SRAP) molecular marker system to characterize the genetic variability within 71 accessions of the existing collection and resolved uncertainties for the better management of the collection, as a preliminary step to establishing a breeding program. These accessions, which included wild species and cultivars of different subgroups, were consistently identified and separated by SRAP markers. A total of 330 polymorphic bands were detected using 12 primer combinations. The average number of polymorphic bands per primer pair was 27.5. The genetic similarity between accessions ranged between 0.44 and 0.97, as estimated using Jaccard's coefficient. Moreover, SRAP marker system probed to be useful to identify closely related accessions in the genus Musa and facilitated the recognition of duplicates to be eliminated and clarified uncertainties or mislabeled banana accessions introduced to the collection. |
abstract_unstemmed |
Abstract Edible banana and plantains of the Musa genus are important staple food crops cultivated in humid tropical and subtropical climatic zones. These crops are important for subsistence farming in rural communities and also to generate significant employment and income. In an effort to increase the genetic variability of available cultivars, indexed accessions have been introduced into a regional collection in southeastern Mexico, through the Banana Bioversity International Program. The aim of this study was to use the fluorescently labeled sequence-related amplified polymorphism (SRAP) molecular marker system to characterize the genetic variability within 71 accessions of the existing collection and resolved uncertainties for the better management of the collection, as a preliminary step to establishing a breeding program. These accessions, which included wild species and cultivars of different subgroups, were consistently identified and separated by SRAP markers. A total of 330 polymorphic bands were detected using 12 primer combinations. The average number of polymorphic bands per primer pair was 27.5. The genetic similarity between accessions ranged between 0.44 and 0.97, as estimated using Jaccard's coefficient. Moreover, SRAP marker system probed to be useful to identify closely related accessions in the genus Musa and facilitated the recognition of duplicates to be eliminated and clarified uncertainties or mislabeled banana accessions introduced to the collection. |
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container_issue |
3 |
title_short |
Genetic relationships among a collection of Musa germplasm by fluorescent-labeled SRAP |
url |
https://dx.doi.org/10.1007/s11295-013-0694-9 |
remote_bool |
true |
author2 |
James-Kay, Andrew Ku-Cauich, José Roberto Escobedo-GraciaMedrano, Rosa María |
author2Str |
James-Kay, Andrew Ku-Cauich, José Roberto Escobedo-GraciaMedrano, Rosa María |
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481907769 |
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doi_str |
10.1007/s11295-013-0694-9 |
up_date |
2024-07-03T21:21:38.578Z |
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score |
7.3987055 |