Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia

Abstract The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine s...
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Autor*in:	Duran, Robert [verfasserIn] Bielen, Ana [verfasserIn] Paradžik, Tina [verfasserIn] Gassie, Claire [verfasserIn] Pustijanac, Emina [verfasserIn] Cagnon, Christine [verfasserIn] Hamer, Bojan [verfasserIn] Vujaklija, Dušica [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2015

Schlagwörter:	Bacteria diversity Actinobacteria Hydrocarbon contamination Metal contamination T-RFLP Co-occurrence network Community structure Marine coastal sediments

Übergeordnetes Werk:	Enthalten in: Environmental science and pollution research - Berlin : Springer, 1994, 22(2015), 20 vom: 26. Feb., Seite 15215-15229
Übergeordnetes Werk:	volume:22 ; year:2015 ; number:20 ; day:26 ; month:02 ; pages:15215-15229

Links:	Volltext

DOI / URN:	10.1007/s11356-015-4240-1

Katalog-ID:	SPR019135858

Internformat


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520			\|a Abstract The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a “core” Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems.
650		4	\|a Bacteria diversity \|7 (dpeaa)DE-He213
650		4	\|a Actinobacteria \|7 (dpeaa)DE-He213
650		4	\|a Hydrocarbon contamination \|7 (dpeaa)DE-He213
650		4	\|a Metal contamination \|7 (dpeaa)DE-He213
650		4	\|a T-RFLP \|7 (dpeaa)DE-He213
650		4	\|a Co-occurrence network \|7 (dpeaa)DE-He213
650		4	\|a Community structure \|7 (dpeaa)DE-He213
650		4	\|a Marine coastal sediments \|7 (dpeaa)DE-He213
700	1		\|a Bielen, Ana \|e verfasserin \|4 aut
700	1		\|a Paradžik, Tina \|e verfasserin \|4 aut
700	1		\|a Gassie, Claire \|e verfasserin \|4 aut
700	1		\|a Pustijanac, Emina \|e verfasserin \|4 aut
700	1		\|a Cagnon, Christine \|e verfasserin \|4 aut
700	1		\|a Hamer, Bojan \|e verfasserin \|4 aut
700	1		\|a Vujaklija, Dušica \|e verfasserin \|4 aut
773	0	8	\|i Enthalten in \|t Environmental science and pollution research \|d Berlin : Springer, 1994 \|g 22(2015), 20 vom: 26. Feb., Seite 15215-15229 \|w (DE-627)320517926 \|w (DE-600)2014192-0 \|x 1614-7499 \|7 nnns
773	1	8	\|g volume:22 \|g year:2015 \|g number:20 \|g day:26 \|g month:02 \|g pages:15215-15229
856	4	0	\|u https://dx.doi.org/10.1007/s11356-015-4240-1 \|z lizenzpflichtig \|3 Volltext
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912			\|a GBV_ILN_120
912			\|a GBV_ILN_138
912			\|a GBV_ILN_150
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912			\|a GBV_ILN_152
912			\|a GBV_ILN_161
912			\|a GBV_ILN_170
912			\|a GBV_ILN_171
912			\|a GBV_ILN_187
912			\|a GBV_ILN_213
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912			\|a GBV_ILN_2044
912			\|a GBV_ILN_2048
912			\|a GBV_ILN_2049
912			\|a GBV_ILN_2050
912			\|a GBV_ILN_2055
912			\|a GBV_ILN_2057
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912			\|a GBV_ILN_2061
912			\|a GBV_ILN_2064
912			\|a GBV_ILN_2065
912			\|a GBV_ILN_2068
912			\|a GBV_ILN_2070
912			\|a GBV_ILN_2086
912			\|a GBV_ILN_2088
912			\|a GBV_ILN_2093
912			\|a GBV_ILN_2106
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912			\|a GBV_ILN_4323
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912			\|a GBV_ILN_4326
912			\|a GBV_ILN_4328
912			\|a GBV_ILN_4333
912			\|a GBV_ILN_4334
912			\|a GBV_ILN_4335
912			\|a GBV_ILN_4336
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936	b	k	\|a 43.00 \|q ASE
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936	b	k	\|a 58.50 \|q ASE
951			\|a AR
952			\|d 22 \|j 2015 \|e 20 \|b 26 \|c 02 \|h 15215-15229

Indexfelder

author_variant	r d rd a b ab t p tp c g cg e p ep c c cc b h bh d v dv
matchkey_str	article:16147499:2015----::xlrnatnbceiasmlgsnosamrnsdmnsnecnrsehmnnle
hierarchy_sort_str	2015
bklnumber	43.00 43.50 58.50
publishDate	2015
allfields	10.1007/s11356-015-4240-1 doi (DE-627)SPR019135858 (SPR)s11356-015-4240-1-e DE-627 ger DE-627 rakwb eng 333.7 690 ASE 43.00 bkl 43.50 bkl 58.50 bkl Duran, Robert verfasserin aut Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a “core” Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems. Bacteria diversity (dpeaa)DE-He213 Actinobacteria (dpeaa)DE-He213 Hydrocarbon contamination (dpeaa)DE-He213 Metal contamination (dpeaa)DE-He213 T-RFLP (dpeaa)DE-He213 Co-occurrence network (dpeaa)DE-He213 Community structure (dpeaa)DE-He213 Marine coastal sediments (dpeaa)DE-He213 Bielen, Ana verfasserin aut Paradžik, Tina verfasserin aut Gassie, Claire verfasserin aut Pustijanac, Emina verfasserin aut Cagnon, Christine verfasserin aut Hamer, Bojan verfasserin aut Vujaklija, Dušica verfasserin aut Enthalten in Environmental science and pollution research Berlin : Springer, 1994 22(2015), 20 vom: 26. Feb., Seite 15215-15229 (DE-627)320517926 (DE-600)2014192-0 1614-7499 nnns volume:22 year:2015 number:20 day:26 month:02 pages:15215-15229 https://dx.doi.org/10.1007/s11356-015-4240-1 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OPC-GGO SSG-OPC-ASE GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_381 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2360 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 43.00 ASE 43.50 ASE 58.50 ASE AR 22 2015 20 26 02 15215-15229
spelling	10.1007/s11356-015-4240-1 doi (DE-627)SPR019135858 (SPR)s11356-015-4240-1-e DE-627 ger DE-627 rakwb eng 333.7 690 ASE 43.00 bkl 43.50 bkl 58.50 bkl Duran, Robert verfasserin aut Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a “core” Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems. Bacteria diversity (dpeaa)DE-He213 Actinobacteria (dpeaa)DE-He213 Hydrocarbon contamination (dpeaa)DE-He213 Metal contamination (dpeaa)DE-He213 T-RFLP (dpeaa)DE-He213 Co-occurrence network (dpeaa)DE-He213 Community structure (dpeaa)DE-He213 Marine coastal sediments (dpeaa)DE-He213 Bielen, Ana verfasserin aut Paradžik, Tina verfasserin aut Gassie, Claire verfasserin aut Pustijanac, Emina verfasserin aut Cagnon, Christine verfasserin aut Hamer, Bojan verfasserin aut Vujaklija, Dušica verfasserin aut Enthalten in Environmental science and pollution research Berlin : Springer, 1994 22(2015), 20 vom: 26. Feb., Seite 15215-15229 (DE-627)320517926 (DE-600)2014192-0 1614-7499 nnns volume:22 year:2015 number:20 day:26 month:02 pages:15215-15229 https://dx.doi.org/10.1007/s11356-015-4240-1 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OPC-GGO SSG-OPC-ASE GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_381 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2360 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 43.00 ASE 43.50 ASE 58.50 ASE AR 22 2015 20 26 02 15215-15229
allfields_unstemmed	10.1007/s11356-015-4240-1 doi (DE-627)SPR019135858 (SPR)s11356-015-4240-1-e DE-627 ger DE-627 rakwb eng 333.7 690 ASE 43.00 bkl 43.50 bkl 58.50 bkl Duran, Robert verfasserin aut Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a “core” Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems. Bacteria diversity (dpeaa)DE-He213 Actinobacteria (dpeaa)DE-He213 Hydrocarbon contamination (dpeaa)DE-He213 Metal contamination (dpeaa)DE-He213 T-RFLP (dpeaa)DE-He213 Co-occurrence network (dpeaa)DE-He213 Community structure (dpeaa)DE-He213 Marine coastal sediments (dpeaa)DE-He213 Bielen, Ana verfasserin aut Paradžik, Tina verfasserin aut Gassie, Claire verfasserin aut Pustijanac, Emina verfasserin aut Cagnon, Christine verfasserin aut Hamer, Bojan verfasserin aut Vujaklija, Dušica verfasserin aut Enthalten in Environmental science and pollution research Berlin : Springer, 1994 22(2015), 20 vom: 26. Feb., Seite 15215-15229 (DE-627)320517926 (DE-600)2014192-0 1614-7499 nnns volume:22 year:2015 number:20 day:26 month:02 pages:15215-15229 https://dx.doi.org/10.1007/s11356-015-4240-1 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OPC-GGO SSG-OPC-ASE GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_381 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2360 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 43.00 ASE 43.50 ASE 58.50 ASE AR 22 2015 20 26 02 15215-15229
allfieldsGer	10.1007/s11356-015-4240-1 doi (DE-627)SPR019135858 (SPR)s11356-015-4240-1-e DE-627 ger DE-627 rakwb eng 333.7 690 ASE 43.00 bkl 43.50 bkl 58.50 bkl Duran, Robert verfasserin aut Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a “core” Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems. Bacteria diversity (dpeaa)DE-He213 Actinobacteria (dpeaa)DE-He213 Hydrocarbon contamination (dpeaa)DE-He213 Metal contamination (dpeaa)DE-He213 T-RFLP (dpeaa)DE-He213 Co-occurrence network (dpeaa)DE-He213 Community structure (dpeaa)DE-He213 Marine coastal sediments (dpeaa)DE-He213 Bielen, Ana verfasserin aut Paradžik, Tina verfasserin aut Gassie, Claire verfasserin aut Pustijanac, Emina verfasserin aut Cagnon, Christine verfasserin aut Hamer, Bojan verfasserin aut Vujaklija, Dušica verfasserin aut Enthalten in Environmental science and pollution research Berlin : Springer, 1994 22(2015), 20 vom: 26. Feb., Seite 15215-15229 (DE-627)320517926 (DE-600)2014192-0 1614-7499 nnns volume:22 year:2015 number:20 day:26 month:02 pages:15215-15229 https://dx.doi.org/10.1007/s11356-015-4240-1 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OPC-GGO SSG-OPC-ASE GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_381 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2360 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 43.00 ASE 43.50 ASE 58.50 ASE AR 22 2015 20 26 02 15215-15229
allfieldsSound	10.1007/s11356-015-4240-1 doi (DE-627)SPR019135858 (SPR)s11356-015-4240-1-e DE-627 ger DE-627 rakwb eng 333.7 690 ASE 43.00 bkl 43.50 bkl 58.50 bkl Duran, Robert verfasserin aut Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier Abstract The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a “core” Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems. Bacteria diversity (dpeaa)DE-He213 Actinobacteria (dpeaa)DE-He213 Hydrocarbon contamination (dpeaa)DE-He213 Metal contamination (dpeaa)DE-He213 T-RFLP (dpeaa)DE-He213 Co-occurrence network (dpeaa)DE-He213 Community structure (dpeaa)DE-He213 Marine coastal sediments (dpeaa)DE-He213 Bielen, Ana verfasserin aut Paradžik, Tina verfasserin aut Gassie, Claire verfasserin aut Pustijanac, Emina verfasserin aut Cagnon, Christine verfasserin aut Hamer, Bojan verfasserin aut Vujaklija, Dušica verfasserin aut Enthalten in Environmental science and pollution research Berlin : Springer, 1994 22(2015), 20 vom: 26. Feb., Seite 15215-15229 (DE-627)320517926 (DE-600)2014192-0 1614-7499 nnns volume:22 year:2015 number:20 day:26 month:02 pages:15215-15229 https://dx.doi.org/10.1007/s11356-015-4240-1 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OPC-GGO SSG-OPC-ASE GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_381 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2360 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4012 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 43.00 ASE 43.50 ASE 58.50 ASE AR 22 2015 20 26 02 15215-15229
language	English
source	Enthalten in Environmental science and pollution research 22(2015), 20 vom: 26. Feb., Seite 15215-15229 volume:22 year:2015 number:20 day:26 month:02 pages:15215-15229
sourceStr	Enthalten in Environmental science and pollution research 22(2015), 20 vom: 26. Feb., Seite 15215-15229 volume:22 year:2015 number:20 day:26 month:02 pages:15215-15229
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	Bacteria diversity Actinobacteria Hydrocarbon contamination Metal contamination T-RFLP Co-occurrence network Community structure Marine coastal sediments
dewey-raw	333.7
isfreeaccess_bool	false
container_title	Environmental science and pollution research
authorswithroles_txt_mv	Duran, Robert @@aut@@ Bielen, Ana @@aut@@ Paradžik, Tina @@aut@@ Gassie, Claire @@aut@@ Pustijanac, Emina @@aut@@ Cagnon, Christine @@aut@@ Hamer, Bojan @@aut@@ Vujaklija, Dušica @@aut@@
publishDateDaySort_date	2015-02-26T00:00:00Z
hierarchy_top_id	320517926
dewey-sort	3333.7
id	SPR019135858
language_de	englisch
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author	Duran, Robert
spellingShingle	Duran, Robert ddc 333.7 bkl 43.00 bkl 43.50 bkl 58.50 misc Bacteria diversity misc Actinobacteria misc Hydrocarbon contamination misc Metal contamination misc T-RFLP misc Co-occurrence network misc Community structure misc Marine coastal sediments Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia
authorStr	Duran, Robert
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topic_title	333.7 690 ASE 43.00 bkl 43.50 bkl 58.50 bkl Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia Bacteria diversity (dpeaa)DE-He213 Actinobacteria (dpeaa)DE-He213 Hydrocarbon contamination (dpeaa)DE-He213 Metal contamination (dpeaa)DE-He213 T-RFLP (dpeaa)DE-He213 Co-occurrence network (dpeaa)DE-He213 Community structure (dpeaa)DE-He213 Marine coastal sediments (dpeaa)DE-He213
topic	ddc 333.7 bkl 43.00 bkl 43.50 bkl 58.50 misc Bacteria diversity misc Actinobacteria misc Hydrocarbon contamination misc Metal contamination misc T-RFLP misc Co-occurrence network misc Community structure misc Marine coastal sediments
topic_unstemmed	ddc 333.7 bkl 43.00 bkl 43.50 bkl 58.50 misc Bacteria diversity misc Actinobacteria misc Hydrocarbon contamination misc Metal contamination misc T-RFLP misc Co-occurrence network misc Community structure misc Marine coastal sediments
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title	Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia
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title_full	Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia
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author_browse	Duran, Robert Bielen, Ana Paradžik, Tina Gassie, Claire Pustijanac, Emina Cagnon, Christine Hamer, Bojan Vujaklija, Dušica
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title_sort	exploring actinobacteria assemblages in coastal marine sediments under contrasted human influences in the west istria sea, croatia
title_auth	Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia
abstract	Abstract The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a “core” Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems.
abstractGer	Abstract The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a “core” Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems.
abstract_unstemmed	Abstract The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a “core” Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems.
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container_issue	20
title_short	Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia
url	https://dx.doi.org/10.1007/s11356-015-4240-1
remote_bool	true
author2	Bielen, Ana Paradžik, Tina Gassie, Claire Pustijanac, Emina Cagnon, Christine Hamer, Bojan Vujaklija, Dušica
author2Str	Bielen, Ana Paradžik, Tina Gassie, Claire Pustijanac, Emina Cagnon, Christine Hamer, Bojan Vujaklija, Dušica
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doi_str	10.1007/s11356-015-4240-1
up_date	2024-07-04T00:19:44.748Z
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Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia

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