Spirosoma pomorum sp. nov., isolated from apple orchard soil
Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that...
Ausführliche Beschreibung
Gespeichert in:
| Autor*in: |
Li, Weilan [verfasserIn] |
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| Format: |
E-Artikel |
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| Sprache: |
Englisch |
| Erschienen: |
2018 |
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| Schlagwörter: |
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| Anmerkung: |
© The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018 |
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| Übergeordnetes Werk: |
Enthalten in: The journal of microbiology - Seoul : Microbiologcial Soc. of Korea, 2008, 56(2018), 2 vom: Feb., Seite 90-96 |
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| Übergeordnetes Werk: |
volume:56 ; year:2018 ; number:2 ; month:02 ; pages:90-96 |
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| DOI / URN: |
10.1007/s12275-018-7430-y |
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| Katalog-ID: |
SPR024749982 |
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| 100 | 1 | |a Li, Weilan |e verfasserin |4 aut | |
| 245 | 1 | 0 | |a Spirosoma pomorum sp. nov., isolated from apple orchard soil |
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| 500 | |a © The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018 | ||
| 520 | |a Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-$ 11^{T} $ belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum $ 16F6E^{T} $ (94.2% identity), Spirosoma knui 15J8-$ 12^{T} $ (92.7%), and Spirosoma linguale DSM $ 74^{T} $ (91.0%). The G + C content of the genomic DNA of strain S7-2-$ 11^{T} $ was 49.8 mol%. Strain S7-2-$ 11^{T} $ contained summed feature 3 ($ C_{16:1} $ ω7c/$ C_{16:1} $ ω6c; 35.1%), $ C_{16:1} $ ω5c (22.4%), $ C_{15:0} $ iso (13.9%), and $ C_{17:0} $ iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-$ 11^{T} $ with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-$ 11^{T} $ represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. The type strain is S7-2-$ 11^{T} $ (= KCTC $ 52726^{T} $ = JCM $ 32130^{T} $). | ||
| 650 | 4 | |a polyphasic taxonomy |7 (dpeaa)DE-He213 | |
| 700 | 1 | |a Lee, Seung-Yeol |4 aut | |
| 700 | 1 | |a Kang, In-Kyu |4 aut | |
| 700 | 1 | |a Ten, Leonid N. |4 aut | |
| 700 | 1 | |a Jung, Hee-Young |4 aut | |
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10.1007/s12275-018-7430-y doi (DE-627)SPR024749982 (SPR)s12275-018-7430-y-e DE-627 ger DE-627 rakwb eng Li, Weilan verfasserin aut Spirosoma pomorum sp. nov., isolated from apple orchard soil 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018 Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-$ 11^{T} $ belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum $ 16F6E^{T} $ (94.2% identity), Spirosoma knui 15J8-$ 12^{T} $ (92.7%), and Spirosoma linguale DSM $ 74^{T} $ (91.0%). The G + C content of the genomic DNA of strain S7-2-$ 11^{T} $ was 49.8 mol%. Strain S7-2-$ 11^{T} $ contained summed feature 3 ($ C_{16:1} $ ω7c/$ C_{16:1} $ ω6c; 35.1%), $ C_{16:1} $ ω5c (22.4%), $ C_{15:0} $ iso (13.9%), and $ C_{17:0} $ iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-$ 11^{T} $ with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-$ 11^{T} $ represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. The type strain is S7-2-$ 11^{T} $ (= KCTC $ 52726^{T} $ = JCM $ 32130^{T} $). polyphasic taxonomy (dpeaa)DE-He213 Lee, Seung-Yeol aut Kang, In-Kyu aut Ten, Leonid N. aut Jung, Hee-Young aut Enthalten in The journal of microbiology Seoul : Microbiologcial Soc. of Korea, 2008 56(2018), 2 vom: Feb., Seite 90-96 (DE-627)573747318 (DE-600)2441367-7 1976-3794 nnns volume:56 year:2018 number:2 month:02 pages:90-96 https://dx.doi.org/10.1007/s12275-018-7430-y lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_161 GBV_ILN_165 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 56 2018 2 02 90-96 |
| spelling |
10.1007/s12275-018-7430-y doi (DE-627)SPR024749982 (SPR)s12275-018-7430-y-e DE-627 ger DE-627 rakwb eng Li, Weilan verfasserin aut Spirosoma pomorum sp. nov., isolated from apple orchard soil 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018 Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-$ 11^{T} $ belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum $ 16F6E^{T} $ (94.2% identity), Spirosoma knui 15J8-$ 12^{T} $ (92.7%), and Spirosoma linguale DSM $ 74^{T} $ (91.0%). The G + C content of the genomic DNA of strain S7-2-$ 11^{T} $ was 49.8 mol%. Strain S7-2-$ 11^{T} $ contained summed feature 3 ($ C_{16:1} $ ω7c/$ C_{16:1} $ ω6c; 35.1%), $ C_{16:1} $ ω5c (22.4%), $ C_{15:0} $ iso (13.9%), and $ C_{17:0} $ iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-$ 11^{T} $ with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-$ 11^{T} $ represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. The type strain is S7-2-$ 11^{T} $ (= KCTC $ 52726^{T} $ = JCM $ 32130^{T} $). polyphasic taxonomy (dpeaa)DE-He213 Lee, Seung-Yeol aut Kang, In-Kyu aut Ten, Leonid N. aut Jung, Hee-Young aut Enthalten in The journal of microbiology Seoul : Microbiologcial Soc. of Korea, 2008 56(2018), 2 vom: Feb., Seite 90-96 (DE-627)573747318 (DE-600)2441367-7 1976-3794 nnns volume:56 year:2018 number:2 month:02 pages:90-96 https://dx.doi.org/10.1007/s12275-018-7430-y lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_161 GBV_ILN_165 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 56 2018 2 02 90-96 |
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10.1007/s12275-018-7430-y doi (DE-627)SPR024749982 (SPR)s12275-018-7430-y-e DE-627 ger DE-627 rakwb eng Li, Weilan verfasserin aut Spirosoma pomorum sp. nov., isolated from apple orchard soil 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018 Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-$ 11^{T} $ belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum $ 16F6E^{T} $ (94.2% identity), Spirosoma knui 15J8-$ 12^{T} $ (92.7%), and Spirosoma linguale DSM $ 74^{T} $ (91.0%). The G + C content of the genomic DNA of strain S7-2-$ 11^{T} $ was 49.8 mol%. Strain S7-2-$ 11^{T} $ contained summed feature 3 ($ C_{16:1} $ ω7c/$ C_{16:1} $ ω6c; 35.1%), $ C_{16:1} $ ω5c (22.4%), $ C_{15:0} $ iso (13.9%), and $ C_{17:0} $ iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-$ 11^{T} $ with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-$ 11^{T} $ represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. The type strain is S7-2-$ 11^{T} $ (= KCTC $ 52726^{T} $ = JCM $ 32130^{T} $). polyphasic taxonomy (dpeaa)DE-He213 Lee, Seung-Yeol aut Kang, In-Kyu aut Ten, Leonid N. aut Jung, Hee-Young aut Enthalten in The journal of microbiology Seoul : Microbiologcial Soc. of Korea, 2008 56(2018), 2 vom: Feb., Seite 90-96 (DE-627)573747318 (DE-600)2441367-7 1976-3794 nnns volume:56 year:2018 number:2 month:02 pages:90-96 https://dx.doi.org/10.1007/s12275-018-7430-y lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_161 GBV_ILN_165 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 56 2018 2 02 90-96 |
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10.1007/s12275-018-7430-y doi (DE-627)SPR024749982 (SPR)s12275-018-7430-y-e DE-627 ger DE-627 rakwb eng Li, Weilan verfasserin aut Spirosoma pomorum sp. nov., isolated from apple orchard soil 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018 Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-$ 11^{T} $ belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum $ 16F6E^{T} $ (94.2% identity), Spirosoma knui 15J8-$ 12^{T} $ (92.7%), and Spirosoma linguale DSM $ 74^{T} $ (91.0%). The G + C content of the genomic DNA of strain S7-2-$ 11^{T} $ was 49.8 mol%. Strain S7-2-$ 11^{T} $ contained summed feature 3 ($ C_{16:1} $ ω7c/$ C_{16:1} $ ω6c; 35.1%), $ C_{16:1} $ ω5c (22.4%), $ C_{15:0} $ iso (13.9%), and $ C_{17:0} $ iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-$ 11^{T} $ with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-$ 11^{T} $ represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. The type strain is S7-2-$ 11^{T} $ (= KCTC $ 52726^{T} $ = JCM $ 32130^{T} $). polyphasic taxonomy (dpeaa)DE-He213 Lee, Seung-Yeol aut Kang, In-Kyu aut Ten, Leonid N. aut Jung, Hee-Young aut Enthalten in The journal of microbiology Seoul : Microbiologcial Soc. of Korea, 2008 56(2018), 2 vom: Feb., Seite 90-96 (DE-627)573747318 (DE-600)2441367-7 1976-3794 nnns volume:56 year:2018 number:2 month:02 pages:90-96 https://dx.doi.org/10.1007/s12275-018-7430-y lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_161 GBV_ILN_165 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 56 2018 2 02 90-96 |
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10.1007/s12275-018-7430-y doi (DE-627)SPR024749982 (SPR)s12275-018-7430-y-e DE-627 ger DE-627 rakwb eng Li, Weilan verfasserin aut Spirosoma pomorum sp. nov., isolated from apple orchard soil 2018 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018 Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-$ 11^{T} $ belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum $ 16F6E^{T} $ (94.2% identity), Spirosoma knui 15J8-$ 12^{T} $ (92.7%), and Spirosoma linguale DSM $ 74^{T} $ (91.0%). The G + C content of the genomic DNA of strain S7-2-$ 11^{T} $ was 49.8 mol%. Strain S7-2-$ 11^{T} $ contained summed feature 3 ($ C_{16:1} $ ω7c/$ C_{16:1} $ ω6c; 35.1%), $ C_{16:1} $ ω5c (22.4%), $ C_{15:0} $ iso (13.9%), and $ C_{17:0} $ iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-$ 11^{T} $ with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-$ 11^{T} $ represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. The type strain is S7-2-$ 11^{T} $ (= KCTC $ 52726^{T} $ = JCM $ 32130^{T} $). polyphasic taxonomy (dpeaa)DE-He213 Lee, Seung-Yeol aut Kang, In-Kyu aut Ten, Leonid N. aut Jung, Hee-Young aut Enthalten in The journal of microbiology Seoul : Microbiologcial Soc. of Korea, 2008 56(2018), 2 vom: Feb., Seite 90-96 (DE-627)573747318 (DE-600)2441367-7 1976-3794 nnns volume:56 year:2018 number:2 month:02 pages:90-96 https://dx.doi.org/10.1007/s12275-018-7430-y lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_101 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_161 GBV_ILN_165 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2070 GBV_ILN_2086 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2116 GBV_ILN_2118 GBV_ILN_2119 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 56 2018 2 02 90-96 |
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Enthalten in The journal of microbiology 56(2018), 2 vom: Feb., Seite 90-96 volume:56 year:2018 number:2 month:02 pages:90-96 |
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Li, Weilan @@aut@@ Lee, Seung-Yeol @@aut@@ Kang, In-Kyu @@aut@@ Ten, Leonid N. @@aut@@ Jung, Hee-Young @@aut@@ |
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<?xml version="1.0" encoding="UTF-8"?><collection xmlns="http://www.loc.gov/MARC21/slim"><record><leader>01000caa a22002652 4500</leader><controlfield tag="001">SPR024749982</controlfield><controlfield tag="003">DE-627</controlfield><controlfield tag="005">20230519192918.0</controlfield><controlfield tag="007">cr uuu---uuuuu</controlfield><controlfield tag="008">201007s2018 xx |||||o 00| ||eng c</controlfield><datafield tag="024" ind1="7" ind2=" "><subfield code="a">10.1007/s12275-018-7430-y</subfield><subfield code="2">doi</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(DE-627)SPR024749982</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(SPR)s12275-018-7430-y-e</subfield></datafield><datafield tag="040" ind1=" " ind2=" "><subfield code="a">DE-627</subfield><subfield code="b">ger</subfield><subfield code="c">DE-627</subfield><subfield code="e">rakwb</subfield></datafield><datafield tag="041" ind1=" " ind2=" "><subfield code="a">eng</subfield></datafield><datafield tag="100" ind1="1" ind2=" "><subfield code="a">Li, Weilan</subfield><subfield code="e">verfasserin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="245" ind1="1" ind2="0"><subfield code="a">Spirosoma pomorum sp. nov., isolated from apple orchard soil</subfield></datafield><datafield tag="264" ind1=" " ind2="1"><subfield code="c">2018</subfield></datafield><datafield tag="336" ind1=" " ind2=" "><subfield code="a">Text</subfield><subfield code="b">txt</subfield><subfield code="2">rdacontent</subfield></datafield><datafield tag="337" ind1=" " ind2=" "><subfield code="a">Computermedien</subfield><subfield code="b">c</subfield><subfield code="2">rdamedia</subfield></datafield><datafield tag="338" ind1=" " ind2=" "><subfield code="a">Online-Ressource</subfield><subfield code="b">cr</subfield><subfield code="2">rdacarrier</subfield></datafield><datafield tag="500" ind1=" " ind2=" "><subfield code="a">© The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018</subfield></datafield><datafield tag="520" ind1=" " ind2=" "><subfield code="a">Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-$ 11^{T} $ belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum $ 16F6E^{T} $ (94.2% identity), Spirosoma knui 15J8-$ 12^{T} $ (92.7%), and Spirosoma linguale DSM $ 74^{T} $ (91.0%). The G + C content of the genomic DNA of strain S7-2-$ 11^{T} $ was 49.8 mol%. Strain S7-2-$ 11^{T} $ contained summed feature 3 ($ C_{16:1} $ ω7c/$ C_{16:1} $ ω6c; 35.1%), $ C_{16:1} $ ω5c (22.4%), $ C_{15:0} $ iso (13.9%), and $ C_{17:0} $ iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-$ 11^{T} $ with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-$ 11^{T} $ represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. 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Li, Weilan |
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Li, Weilan misc polyphasic taxonomy Spirosoma pomorum sp. nov., isolated from apple orchard soil |
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Spirosoma pomorum sp. nov., isolated from apple orchard soil polyphasic taxonomy (dpeaa)DE-He213 |
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Li, Weilan Lee, Seung-Yeol Kang, In-Kyu Ten, Leonid N. Jung, Hee-Young |
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spirosoma pomorum sp. nov., isolated from apple orchard soil |
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Spirosoma pomorum sp. nov., isolated from apple orchard soil |
| abstract |
Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-$ 11^{T} $ belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum $ 16F6E^{T} $ (94.2% identity), Spirosoma knui 15J8-$ 12^{T} $ (92.7%), and Spirosoma linguale DSM $ 74^{T} $ (91.0%). The G + C content of the genomic DNA of strain S7-2-$ 11^{T} $ was 49.8 mol%. Strain S7-2-$ 11^{T} $ contained summed feature 3 ($ C_{16:1} $ ω7c/$ C_{16:1} $ ω6c; 35.1%), $ C_{16:1} $ ω5c (22.4%), $ C_{15:0} $ iso (13.9%), and $ C_{17:0} $ iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-$ 11^{T} $ with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-$ 11^{T} $ represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. The type strain is S7-2-$ 11^{T} $ (= KCTC $ 52726^{T} $ = JCM $ 32130^{T} $). © The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018 |
| abstractGer |
Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-$ 11^{T} $ belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum $ 16F6E^{T} $ (94.2% identity), Spirosoma knui 15J8-$ 12^{T} $ (92.7%), and Spirosoma linguale DSM $ 74^{T} $ (91.0%). The G + C content of the genomic DNA of strain S7-2-$ 11^{T} $ was 49.8 mol%. Strain S7-2-$ 11^{T} $ contained summed feature 3 ($ C_{16:1} $ ω7c/$ C_{16:1} $ ω6c; 35.1%), $ C_{16:1} $ ω5c (22.4%), $ C_{15:0} $ iso (13.9%), and $ C_{17:0} $ iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-$ 11^{T} $ with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-$ 11^{T} $ represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. The type strain is S7-2-$ 11^{T} $ (= KCTC $ 52726^{T} $ = JCM $ 32130^{T} $). © The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018 |
| abstract_unstemmed |
Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-$ 11^{T} $, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-$ 11^{T} $ belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum $ 16F6E^{T} $ (94.2% identity), Spirosoma knui 15J8-$ 12^{T} $ (92.7%), and Spirosoma linguale DSM $ 74^{T} $ (91.0%). The G + C content of the genomic DNA of strain S7-2-$ 11^{T} $ was 49.8 mol%. Strain S7-2-$ 11^{T} $ contained summed feature 3 ($ C_{16:1} $ ω7c/$ C_{16:1} $ ω6c; 35.1%), $ C_{16:1} $ ω5c (22.4%), $ C_{15:0} $ iso (13.9%), and $ C_{17:0} $ iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-$ 11^{T} $ with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-$ 11^{T} $ represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. The type strain is S7-2-$ 11^{T} $ (= KCTC $ 52726^{T} $ = JCM $ 32130^{T} $). © The Microbiological Society of Korea and Springer-Verlag GmbH Germany, part of Springer Nature 2018 |
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Spirosoma pomorum sp. nov., isolated from apple orchard soil |
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https://dx.doi.org/10.1007/s12275-018-7430-y |
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Lee, Seung-Yeol Kang, In-Kyu Ten, Leonid N. Jung, Hee-Young |
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Lee, Seung-Yeol Kang, In-Kyu Ten, Leonid N. Jung, Hee-Young |
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10.1007/s12275-018-7430-y |
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2024-07-04T02:15:01.228Z |
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| score |
7.3998213 |