The mitochondrial transcriptome of the anglerfish Lophius piscatorius

Objective Analyze key features of the anglerfish Lophius piscatorius mitochondrial transcriptome based on high-throughput total RNA sequencing. Results We determined the complete mitochondrial DNA and corresponding transcriptome sequences of L. piscatorius. Key features include highly abundant mitoc...
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Autor*in:	Dubin, Arseny [verfasserIn] Jørgensen, Tor Erik Jakt, Lars Martin Johansen, Steinar Daae

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2019

Schlagwörter:	Anglerfish Antisense RNA Humanin Mitogenome Long noncoding RNA lncCOI mtDNA

Anmerkung:	© The Author(s) 2019

Übergeordnetes Werk:	Enthalten in: BMC Research Notes - London, 2008, 12(2019), 1 vom: 10. Dez.
Übergeordnetes Werk:	volume:12 ; year:2019 ; number:1 ; day:10 ; month:12

Links:	Volltext

DOI / URN:	10.1186/s13104-019-4835-6

Katalog-ID:	SPR030347068

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245	1	4	\|a The mitochondrial transcriptome of the anglerfish Lophius piscatorius
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520			\|a Objective Analyze key features of the anglerfish Lophius piscatorius mitochondrial transcriptome based on high-throughput total RNA sequencing. Results We determined the complete mitochondrial DNA and corresponding transcriptome sequences of L. piscatorius. Key features include highly abundant mitochondrial ribosomal RNAs (10–100 times that of mRNAs), and that cytochrome oxidase mRNAs appeared > 5 times more abundant than both NADH dehydrogenase and ATPase mRNAs. Unusual for a vertebrate mitochondrial mRNA, the polyadenylated COI mRNA was found to harbor a 75 nucleotide 3′ untranslated region. The mitochondrial genome expressed several non-canonical genes, including the long noncoding RNAs lncCR-H, lncCR-L and lncCOI. Whereas lncCR-H and lncCR-L mapped to opposite strands in a non-overlapping organization within the control region, lncCOI appeared novel among vertebrates. We found lncCOI to be a highly abundant mitochondrial RNA in antisense to the COI mRNA. Finally, we present the coding potential of a humanin-like peptide within the large subunit ribosomal RNA.
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hierarchy_sort_str	2019
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allfields	10.1186/s13104-019-4835-6 doi (DE-627)SPR030347068 (SPR)s13104-019-4835-6-e DE-627 ger DE-627 rakwb eng Dubin, Arseny verfasserin aut The mitochondrial transcriptome of the anglerfish Lophius piscatorius 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s) 2019 Objective Analyze key features of the anglerfish Lophius piscatorius mitochondrial transcriptome based on high-throughput total RNA sequencing. Results We determined the complete mitochondrial DNA and corresponding transcriptome sequences of L. piscatorius. Key features include highly abundant mitochondrial ribosomal RNAs (10–100 times that of mRNAs), and that cytochrome oxidase mRNAs appeared > 5 times more abundant than both NADH dehydrogenase and ATPase mRNAs. Unusual for a vertebrate mitochondrial mRNA, the polyadenylated COI mRNA was found to harbor a 75 nucleotide 3′ untranslated region. The mitochondrial genome expressed several non-canonical genes, including the long noncoding RNAs lncCR-H, lncCR-L and lncCOI. Whereas lncCR-H and lncCR-L mapped to opposite strands in a non-overlapping organization within the control region, lncCOI appeared novel among vertebrates. We found lncCOI to be a highly abundant mitochondrial RNA in antisense to the COI mRNA. Finally, we present the coding potential of a humanin-like peptide within the large subunit ribosomal RNA. Anglerfish (dpeaa)DE-He213 Antisense RNA (dpeaa)DE-He213 Humanin (dpeaa)DE-He213 Mitogenome (dpeaa)DE-He213 Long noncoding RNA (dpeaa)DE-He213 lncCOI (dpeaa)DE-He213 mtDNA (dpeaa)DE-He213 Jørgensen, Tor Erik aut Jakt, Lars Martin aut Johansen, Steinar Daae aut Enthalten in BMC Research Notes London, 2008 12(2019), 1 vom: 10. Dez. (DE-627)559431805 (DE-600)2413336-X 1756-0500 nnns volume:12 year:2019 number:1 day:10 month:12 https://dx.doi.org/10.1186/s13104-019-4835-6 kostenfrei Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 12 2019 1 10 12
spelling	10.1186/s13104-019-4835-6 doi (DE-627)SPR030347068 (SPR)s13104-019-4835-6-e DE-627 ger DE-627 rakwb eng Dubin, Arseny verfasserin aut The mitochondrial transcriptome of the anglerfish Lophius piscatorius 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s) 2019 Objective Analyze key features of the anglerfish Lophius piscatorius mitochondrial transcriptome based on high-throughput total RNA sequencing. Results We determined the complete mitochondrial DNA and corresponding transcriptome sequences of L. piscatorius. Key features include highly abundant mitochondrial ribosomal RNAs (10–100 times that of mRNAs), and that cytochrome oxidase mRNAs appeared > 5 times more abundant than both NADH dehydrogenase and ATPase mRNAs. Unusual for a vertebrate mitochondrial mRNA, the polyadenylated COI mRNA was found to harbor a 75 nucleotide 3′ untranslated region. The mitochondrial genome expressed several non-canonical genes, including the long noncoding RNAs lncCR-H, lncCR-L and lncCOI. Whereas lncCR-H and lncCR-L mapped to opposite strands in a non-overlapping organization within the control region, lncCOI appeared novel among vertebrates. We found lncCOI to be a highly abundant mitochondrial RNA in antisense to the COI mRNA. Finally, we present the coding potential of a humanin-like peptide within the large subunit ribosomal RNA. Anglerfish (dpeaa)DE-He213 Antisense RNA (dpeaa)DE-He213 Humanin (dpeaa)DE-He213 Mitogenome (dpeaa)DE-He213 Long noncoding RNA (dpeaa)DE-He213 lncCOI (dpeaa)DE-He213 mtDNA (dpeaa)DE-He213 Jørgensen, Tor Erik aut Jakt, Lars Martin aut Johansen, Steinar Daae aut Enthalten in BMC Research Notes London, 2008 12(2019), 1 vom: 10. Dez. (DE-627)559431805 (DE-600)2413336-X 1756-0500 nnns volume:12 year:2019 number:1 day:10 month:12 https://dx.doi.org/10.1186/s13104-019-4835-6 kostenfrei Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 12 2019 1 10 12
allfields_unstemmed	10.1186/s13104-019-4835-6 doi (DE-627)SPR030347068 (SPR)s13104-019-4835-6-e DE-627 ger DE-627 rakwb eng Dubin, Arseny verfasserin aut The mitochondrial transcriptome of the anglerfish Lophius piscatorius 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s) 2019 Objective Analyze key features of the anglerfish Lophius piscatorius mitochondrial transcriptome based on high-throughput total RNA sequencing. Results We determined the complete mitochondrial DNA and corresponding transcriptome sequences of L. piscatorius. Key features include highly abundant mitochondrial ribosomal RNAs (10–100 times that of mRNAs), and that cytochrome oxidase mRNAs appeared > 5 times more abundant than both NADH dehydrogenase and ATPase mRNAs. Unusual for a vertebrate mitochondrial mRNA, the polyadenylated COI mRNA was found to harbor a 75 nucleotide 3′ untranslated region. The mitochondrial genome expressed several non-canonical genes, including the long noncoding RNAs lncCR-H, lncCR-L and lncCOI. Whereas lncCR-H and lncCR-L mapped to opposite strands in a non-overlapping organization within the control region, lncCOI appeared novel among vertebrates. We found lncCOI to be a highly abundant mitochondrial RNA in antisense to the COI mRNA. Finally, we present the coding potential of a humanin-like peptide within the large subunit ribosomal RNA. Anglerfish (dpeaa)DE-He213 Antisense RNA (dpeaa)DE-He213 Humanin (dpeaa)DE-He213 Mitogenome (dpeaa)DE-He213 Long noncoding RNA (dpeaa)DE-He213 lncCOI (dpeaa)DE-He213 mtDNA (dpeaa)DE-He213 Jørgensen, Tor Erik aut Jakt, Lars Martin aut Johansen, Steinar Daae aut Enthalten in BMC Research Notes London, 2008 12(2019), 1 vom: 10. Dez. (DE-627)559431805 (DE-600)2413336-X 1756-0500 nnns volume:12 year:2019 number:1 day:10 month:12 https://dx.doi.org/10.1186/s13104-019-4835-6 kostenfrei Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 12 2019 1 10 12
allfieldsGer	10.1186/s13104-019-4835-6 doi (DE-627)SPR030347068 (SPR)s13104-019-4835-6-e DE-627 ger DE-627 rakwb eng Dubin, Arseny verfasserin aut The mitochondrial transcriptome of the anglerfish Lophius piscatorius 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s) 2019 Objective Analyze key features of the anglerfish Lophius piscatorius mitochondrial transcriptome based on high-throughput total RNA sequencing. Results We determined the complete mitochondrial DNA and corresponding transcriptome sequences of L. piscatorius. Key features include highly abundant mitochondrial ribosomal RNAs (10–100 times that of mRNAs), and that cytochrome oxidase mRNAs appeared > 5 times more abundant than both NADH dehydrogenase and ATPase mRNAs. Unusual for a vertebrate mitochondrial mRNA, the polyadenylated COI mRNA was found to harbor a 75 nucleotide 3′ untranslated region. The mitochondrial genome expressed several non-canonical genes, including the long noncoding RNAs lncCR-H, lncCR-L and lncCOI. Whereas lncCR-H and lncCR-L mapped to opposite strands in a non-overlapping organization within the control region, lncCOI appeared novel among vertebrates. We found lncCOI to be a highly abundant mitochondrial RNA in antisense to the COI mRNA. Finally, we present the coding potential of a humanin-like peptide within the large subunit ribosomal RNA. Anglerfish (dpeaa)DE-He213 Antisense RNA (dpeaa)DE-He213 Humanin (dpeaa)DE-He213 Mitogenome (dpeaa)DE-He213 Long noncoding RNA (dpeaa)DE-He213 lncCOI (dpeaa)DE-He213 mtDNA (dpeaa)DE-He213 Jørgensen, Tor Erik aut Jakt, Lars Martin aut Johansen, Steinar Daae aut Enthalten in BMC Research Notes London, 2008 12(2019), 1 vom: 10. Dez. (DE-627)559431805 (DE-600)2413336-X 1756-0500 nnns volume:12 year:2019 number:1 day:10 month:12 https://dx.doi.org/10.1186/s13104-019-4835-6 kostenfrei Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 12 2019 1 10 12
allfieldsSound	10.1186/s13104-019-4835-6 doi (DE-627)SPR030347068 (SPR)s13104-019-4835-6-e DE-627 ger DE-627 rakwb eng Dubin, Arseny verfasserin aut The mitochondrial transcriptome of the anglerfish Lophius piscatorius 2019 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s) 2019 Objective Analyze key features of the anglerfish Lophius piscatorius mitochondrial transcriptome based on high-throughput total RNA sequencing. Results We determined the complete mitochondrial DNA and corresponding transcriptome sequences of L. piscatorius. Key features include highly abundant mitochondrial ribosomal RNAs (10–100 times that of mRNAs), and that cytochrome oxidase mRNAs appeared > 5 times more abundant than both NADH dehydrogenase and ATPase mRNAs. Unusual for a vertebrate mitochondrial mRNA, the polyadenylated COI mRNA was found to harbor a 75 nucleotide 3′ untranslated region. The mitochondrial genome expressed several non-canonical genes, including the long noncoding RNAs lncCR-H, lncCR-L and lncCOI. Whereas lncCR-H and lncCR-L mapped to opposite strands in a non-overlapping organization within the control region, lncCOI appeared novel among vertebrates. We found lncCOI to be a highly abundant mitochondrial RNA in antisense to the COI mRNA. Finally, we present the coding potential of a humanin-like peptide within the large subunit ribosomal RNA. Anglerfish (dpeaa)DE-He213 Antisense RNA (dpeaa)DE-He213 Humanin (dpeaa)DE-He213 Mitogenome (dpeaa)DE-He213 Long noncoding RNA (dpeaa)DE-He213 lncCOI (dpeaa)DE-He213 mtDNA (dpeaa)DE-He213 Jørgensen, Tor Erik aut Jakt, Lars Martin aut Johansen, Steinar Daae aut Enthalten in BMC Research Notes London, 2008 12(2019), 1 vom: 10. Dez. (DE-627)559431805 (DE-600)2413336-X 1756-0500 nnns volume:12 year:2019 number:1 day:10 month:12 https://dx.doi.org/10.1186/s13104-019-4835-6 kostenfrei Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_206 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2003 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 12 2019 1 10 12
language	English
source	Enthalten in BMC Research Notes 12(2019), 1 vom: 10. Dez. volume:12 year:2019 number:1 day:10 month:12
sourceStr	Enthalten in BMC Research Notes 12(2019), 1 vom: 10. Dez. volume:12 year:2019 number:1 day:10 month:12
format_phy_str_mv	Article
institution	findex.gbv.de
topic_facet	Anglerfish Antisense RNA Humanin Mitogenome Long noncoding RNA lncCOI mtDNA
isfreeaccess_bool	true
container_title	BMC Research Notes
authorswithroles_txt_mv	Dubin, Arseny @@aut@@ Jørgensen, Tor Erik @@aut@@ Jakt, Lars Martin @@aut@@ Johansen, Steinar Daae @@aut@@
publishDateDaySort_date	2019-12-10T00:00:00Z
hierarchy_top_id	559431805
id	SPR030347068
language_de	englisch
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author	Dubin, Arseny
spellingShingle	Dubin, Arseny misc Anglerfish misc Antisense RNA misc Humanin misc Mitogenome misc Long noncoding RNA misc lncCOI misc mtDNA The mitochondrial transcriptome of the anglerfish Lophius piscatorius
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topic_title	The mitochondrial transcriptome of the anglerfish Lophius piscatorius Anglerfish (dpeaa)DE-He213 Antisense RNA (dpeaa)DE-He213 Humanin (dpeaa)DE-He213 Mitogenome (dpeaa)DE-He213 Long noncoding RNA (dpeaa)DE-He213 lncCOI (dpeaa)DE-He213 mtDNA (dpeaa)DE-He213
topic	misc Anglerfish misc Antisense RNA misc Humanin misc Mitogenome misc Long noncoding RNA misc lncCOI misc mtDNA
topic_unstemmed	misc Anglerfish misc Antisense RNA misc Humanin misc Mitogenome misc Long noncoding RNA misc lncCOI misc mtDNA
topic_browse	misc Anglerfish misc Antisense RNA misc Humanin misc Mitogenome misc Long noncoding RNA misc lncCOI misc mtDNA
format_facet	Elektronische Aufsätze Aufsätze Elektronische Ressource
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title	The mitochondrial transcriptome of the anglerfish Lophius piscatorius
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title_full	The mitochondrial transcriptome of the anglerfish Lophius piscatorius
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author_browse	Dubin, Arseny Jørgensen, Tor Erik Jakt, Lars Martin Johansen, Steinar Daae
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title_sort	mitochondrial transcriptome of the anglerfish lophius piscatorius
title_auth	The mitochondrial transcriptome of the anglerfish Lophius piscatorius
abstract	Objective Analyze key features of the anglerfish Lophius piscatorius mitochondrial transcriptome based on high-throughput total RNA sequencing. Results We determined the complete mitochondrial DNA and corresponding transcriptome sequences of L. piscatorius. Key features include highly abundant mitochondrial ribosomal RNAs (10–100 times that of mRNAs), and that cytochrome oxidase mRNAs appeared > 5 times more abundant than both NADH dehydrogenase and ATPase mRNAs. Unusual for a vertebrate mitochondrial mRNA, the polyadenylated COI mRNA was found to harbor a 75 nucleotide 3′ untranslated region. The mitochondrial genome expressed several non-canonical genes, including the long noncoding RNAs lncCR-H, lncCR-L and lncCOI. Whereas lncCR-H and lncCR-L mapped to opposite strands in a non-overlapping organization within the control region, lncCOI appeared novel among vertebrates. We found lncCOI to be a highly abundant mitochondrial RNA in antisense to the COI mRNA. Finally, we present the coding potential of a humanin-like peptide within the large subunit ribosomal RNA. © The Author(s) 2019
abstractGer	Objective Analyze key features of the anglerfish Lophius piscatorius mitochondrial transcriptome based on high-throughput total RNA sequencing. Results We determined the complete mitochondrial DNA and corresponding transcriptome sequences of L. piscatorius. Key features include highly abundant mitochondrial ribosomal RNAs (10–100 times that of mRNAs), and that cytochrome oxidase mRNAs appeared > 5 times more abundant than both NADH dehydrogenase and ATPase mRNAs. Unusual for a vertebrate mitochondrial mRNA, the polyadenylated COI mRNA was found to harbor a 75 nucleotide 3′ untranslated region. The mitochondrial genome expressed several non-canonical genes, including the long noncoding RNAs lncCR-H, lncCR-L and lncCOI. Whereas lncCR-H and lncCR-L mapped to opposite strands in a non-overlapping organization within the control region, lncCOI appeared novel among vertebrates. We found lncCOI to be a highly abundant mitochondrial RNA in antisense to the COI mRNA. Finally, we present the coding potential of a humanin-like peptide within the large subunit ribosomal RNA. © The Author(s) 2019
abstract_unstemmed	Objective Analyze key features of the anglerfish Lophius piscatorius mitochondrial transcriptome based on high-throughput total RNA sequencing. Results We determined the complete mitochondrial DNA and corresponding transcriptome sequences of L. piscatorius. Key features include highly abundant mitochondrial ribosomal RNAs (10–100 times that of mRNAs), and that cytochrome oxidase mRNAs appeared > 5 times more abundant than both NADH dehydrogenase and ATPase mRNAs. Unusual for a vertebrate mitochondrial mRNA, the polyadenylated COI mRNA was found to harbor a 75 nucleotide 3′ untranslated region. The mitochondrial genome expressed several non-canonical genes, including the long noncoding RNAs lncCR-H, lncCR-L and lncCOI. Whereas lncCR-H and lncCR-L mapped to opposite strands in a non-overlapping organization within the control region, lncCOI appeared novel among vertebrates. We found lncCOI to be a highly abundant mitochondrial RNA in antisense to the COI mRNA. Finally, we present the coding potential of a humanin-like peptide within the large subunit ribosomal RNA. © The Author(s) 2019
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title_short	The mitochondrial transcriptome of the anglerfish Lophius piscatorius
url	https://dx.doi.org/10.1186/s13104-019-4835-6
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The mitochondrial transcriptome of the anglerfish Lophius piscatorius

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Zugang & Verfügbarkeit

Vorhandene Bände

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