First report of Rice orange leaf disease phytoplasma (16 SrI) in rice (Oryza sativa) in India
Abstract Rice (Oryza sativa L.,) is one of the most important cereal crops worldwide. In this study, phytoplasmas have been detected in symptomatic leaves of four varieties of rice using nested-PCR with primer pairs P1/P7 and R16F2n/R16R2, which amplified a 1.2 kb fragment of the 16S rRNA gene. The...
Ausführliche Beschreibung
Gespeichert in:
| Autor*in: |
Valarmathi, P. [verfasserIn] |
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| Format: |
E-Artikel |
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| Sprache: |
Englisch |
| Erschienen: |
2013 |
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| Schlagwörter: |
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| Anmerkung: |
© Australasian Plant Pathology Society Inc. 2013 |
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| Übergeordnetes Werk: |
Enthalten in: Australasian plant disease notes - Collingwood, Victoria : CSIRO Publ., 2006, 8(2013), 1 vom: 26. Okt., Seite 141-143 |
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| Übergeordnetes Werk: |
volume:8 ; year:2013 ; number:1 ; day:26 ; month:10 ; pages:141-143 |
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| DOI / URN: |
10.1007/s13314-013-0117-7 |
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SPR031310982 |
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| 520 | |a Abstract Rice (Oryza sativa L.,) is one of the most important cereal crops worldwide. In this study, phytoplasmas have been detected in symptomatic leaves of four varieties of rice using nested-PCR with primer pairs P1/P7 and R16F2n/R16R2, which amplified a 1.2 kb fragment of the 16S rRNA gene. The nucleotide sequence analysis of the fragment had 100 % identity among the sequences from the four varieties (GenBank Accession numbers: JX290545, JX290546, JX290547 and JX290548) and 99 % nucleotide sequence identity with 16S rRNA gene sequences of the Rice orange leaf disease phytoplasmas from the Philippines and Thailand, Maize bushy stunt phytoplasma and Wheat blue dwarf phytoplasma belonging to the ‘Candidatus Phytoplasma asteris' (16SrI) group. This is the first report of 16SrI group phytoplasmas infecting rice in India. | ||
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10.1007/s13314-013-0117-7 doi (DE-627)SPR031310982 (SPR)s13314-013-0117-7-e DE-627 ger DE-627 rakwb eng Valarmathi, P. verfasserin aut First report of Rice orange leaf disease phytoplasma (16 SrI) in rice (Oryza sativa) in India 2013 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Australasian Plant Pathology Society Inc. 2013 Abstract Rice (Oryza sativa L.,) is one of the most important cereal crops worldwide. In this study, phytoplasmas have been detected in symptomatic leaves of four varieties of rice using nested-PCR with primer pairs P1/P7 and R16F2n/R16R2, which amplified a 1.2 kb fragment of the 16S rRNA gene. The nucleotide sequence analysis of the fragment had 100 % identity among the sequences from the four varieties (GenBank Accession numbers: JX290545, JX290546, JX290547 and JX290548) and 99 % nucleotide sequence identity with 16S rRNA gene sequences of the Rice orange leaf disease phytoplasmas from the Philippines and Thailand, Maize bushy stunt phytoplasma and Wheat blue dwarf phytoplasma belonging to the ‘Candidatus Phytoplasma asteris' (16SrI) group. This is the first report of 16SrI group phytoplasmas infecting rice in India. Rice (dpeaa)DE-He213 Orange leaf phytoplasma (dpeaa)DE-He213 Nested PCR (dpeaa)DE-He213 Rabindran, R. aut Velazhahan, R. aut Suresh, S. aut Robin, S. aut Enthalten in Australasian plant disease notes Collingwood, Victoria : CSIRO Publ., 2006 8(2013), 1 vom: 26. Okt., Seite 141-143 (DE-627)517415607 (DE-600)2250071-6 1833-928X nnns volume:8 year:2013 number:1 day:26 month:10 pages:141-143 https://dx.doi.org/10.1007/s13314-013-0117-7 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 8 2013 1 26 10 141-143 |
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10.1007/s13314-013-0117-7 doi (DE-627)SPR031310982 (SPR)s13314-013-0117-7-e DE-627 ger DE-627 rakwb eng Valarmathi, P. verfasserin aut First report of Rice orange leaf disease phytoplasma (16 SrI) in rice (Oryza sativa) in India 2013 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Australasian Plant Pathology Society Inc. 2013 Abstract Rice (Oryza sativa L.,) is one of the most important cereal crops worldwide. In this study, phytoplasmas have been detected in symptomatic leaves of four varieties of rice using nested-PCR with primer pairs P1/P7 and R16F2n/R16R2, which amplified a 1.2 kb fragment of the 16S rRNA gene. The nucleotide sequence analysis of the fragment had 100 % identity among the sequences from the four varieties (GenBank Accession numbers: JX290545, JX290546, JX290547 and JX290548) and 99 % nucleotide sequence identity with 16S rRNA gene sequences of the Rice orange leaf disease phytoplasmas from the Philippines and Thailand, Maize bushy stunt phytoplasma and Wheat blue dwarf phytoplasma belonging to the ‘Candidatus Phytoplasma asteris' (16SrI) group. This is the first report of 16SrI group phytoplasmas infecting rice in India. Rice (dpeaa)DE-He213 Orange leaf phytoplasma (dpeaa)DE-He213 Nested PCR (dpeaa)DE-He213 Rabindran, R. aut Velazhahan, R. aut Suresh, S. aut Robin, S. aut Enthalten in Australasian plant disease notes Collingwood, Victoria : CSIRO Publ., 2006 8(2013), 1 vom: 26. Okt., Seite 141-143 (DE-627)517415607 (DE-600)2250071-6 1833-928X nnns volume:8 year:2013 number:1 day:26 month:10 pages:141-143 https://dx.doi.org/10.1007/s13314-013-0117-7 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 8 2013 1 26 10 141-143 |
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10.1007/s13314-013-0117-7 doi (DE-627)SPR031310982 (SPR)s13314-013-0117-7-e DE-627 ger DE-627 rakwb eng Valarmathi, P. verfasserin aut First report of Rice orange leaf disease phytoplasma (16 SrI) in rice (Oryza sativa) in India 2013 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Australasian Plant Pathology Society Inc. 2013 Abstract Rice (Oryza sativa L.,) is one of the most important cereal crops worldwide. In this study, phytoplasmas have been detected in symptomatic leaves of four varieties of rice using nested-PCR with primer pairs P1/P7 and R16F2n/R16R2, which amplified a 1.2 kb fragment of the 16S rRNA gene. The nucleotide sequence analysis of the fragment had 100 % identity among the sequences from the four varieties (GenBank Accession numbers: JX290545, JX290546, JX290547 and JX290548) and 99 % nucleotide sequence identity with 16S rRNA gene sequences of the Rice orange leaf disease phytoplasmas from the Philippines and Thailand, Maize bushy stunt phytoplasma and Wheat blue dwarf phytoplasma belonging to the ‘Candidatus Phytoplasma asteris' (16SrI) group. This is the first report of 16SrI group phytoplasmas infecting rice in India. Rice (dpeaa)DE-He213 Orange leaf phytoplasma (dpeaa)DE-He213 Nested PCR (dpeaa)DE-He213 Rabindran, R. aut Velazhahan, R. aut Suresh, S. aut Robin, S. aut Enthalten in Australasian plant disease notes Collingwood, Victoria : CSIRO Publ., 2006 8(2013), 1 vom: 26. Okt., Seite 141-143 (DE-627)517415607 (DE-600)2250071-6 1833-928X nnns volume:8 year:2013 number:1 day:26 month:10 pages:141-143 https://dx.doi.org/10.1007/s13314-013-0117-7 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 8 2013 1 26 10 141-143 |
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10.1007/s13314-013-0117-7 doi (DE-627)SPR031310982 (SPR)s13314-013-0117-7-e DE-627 ger DE-627 rakwb eng Valarmathi, P. verfasserin aut First report of Rice orange leaf disease phytoplasma (16 SrI) in rice (Oryza sativa) in India 2013 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Australasian Plant Pathology Society Inc. 2013 Abstract Rice (Oryza sativa L.,) is one of the most important cereal crops worldwide. In this study, phytoplasmas have been detected in symptomatic leaves of four varieties of rice using nested-PCR with primer pairs P1/P7 and R16F2n/R16R2, which amplified a 1.2 kb fragment of the 16S rRNA gene. The nucleotide sequence analysis of the fragment had 100 % identity among the sequences from the four varieties (GenBank Accession numbers: JX290545, JX290546, JX290547 and JX290548) and 99 % nucleotide sequence identity with 16S rRNA gene sequences of the Rice orange leaf disease phytoplasmas from the Philippines and Thailand, Maize bushy stunt phytoplasma and Wheat blue dwarf phytoplasma belonging to the ‘Candidatus Phytoplasma asteris' (16SrI) group. This is the first report of 16SrI group phytoplasmas infecting rice in India. Rice (dpeaa)DE-He213 Orange leaf phytoplasma (dpeaa)DE-He213 Nested PCR (dpeaa)DE-He213 Rabindran, R. aut Velazhahan, R. aut Suresh, S. aut Robin, S. aut Enthalten in Australasian plant disease notes Collingwood, Victoria : CSIRO Publ., 2006 8(2013), 1 vom: 26. Okt., Seite 141-143 (DE-627)517415607 (DE-600)2250071-6 1833-928X nnns volume:8 year:2013 number:1 day:26 month:10 pages:141-143 https://dx.doi.org/10.1007/s13314-013-0117-7 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 8 2013 1 26 10 141-143 |
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10.1007/s13314-013-0117-7 doi (DE-627)SPR031310982 (SPR)s13314-013-0117-7-e DE-627 ger DE-627 rakwb eng Valarmathi, P. verfasserin aut First report of Rice orange leaf disease phytoplasma (16 SrI) in rice (Oryza sativa) in India 2013 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Australasian Plant Pathology Society Inc. 2013 Abstract Rice (Oryza sativa L.,) is one of the most important cereal crops worldwide. In this study, phytoplasmas have been detected in symptomatic leaves of four varieties of rice using nested-PCR with primer pairs P1/P7 and R16F2n/R16R2, which amplified a 1.2 kb fragment of the 16S rRNA gene. The nucleotide sequence analysis of the fragment had 100 % identity among the sequences from the four varieties (GenBank Accession numbers: JX290545, JX290546, JX290547 and JX290548) and 99 % nucleotide sequence identity with 16S rRNA gene sequences of the Rice orange leaf disease phytoplasmas from the Philippines and Thailand, Maize bushy stunt phytoplasma and Wheat blue dwarf phytoplasma belonging to the ‘Candidatus Phytoplasma asteris' (16SrI) group. This is the first report of 16SrI group phytoplasmas infecting rice in India. Rice (dpeaa)DE-He213 Orange leaf phytoplasma (dpeaa)DE-He213 Nested PCR (dpeaa)DE-He213 Rabindran, R. aut Velazhahan, R. aut Suresh, S. aut Robin, S. aut Enthalten in Australasian plant disease notes Collingwood, Victoria : CSIRO Publ., 2006 8(2013), 1 vom: 26. Okt., Seite 141-143 (DE-627)517415607 (DE-600)2250071-6 1833-928X nnns volume:8 year:2013 number:1 day:26 month:10 pages:141-143 https://dx.doi.org/10.1007/s13314-013-0117-7 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_20 GBV_ILN_22 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4367 GBV_ILN_4700 AR 8 2013 1 26 10 141-143 |
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First report of Rice orange leaf disease phytoplasma (16 SrI) in rice (Oryza sativa) in India |
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Abstract Rice (Oryza sativa L.,) is one of the most important cereal crops worldwide. In this study, phytoplasmas have been detected in symptomatic leaves of four varieties of rice using nested-PCR with primer pairs P1/P7 and R16F2n/R16R2, which amplified a 1.2 kb fragment of the 16S rRNA gene. The nucleotide sequence analysis of the fragment had 100 % identity among the sequences from the four varieties (GenBank Accession numbers: JX290545, JX290546, JX290547 and JX290548) and 99 % nucleotide sequence identity with 16S rRNA gene sequences of the Rice orange leaf disease phytoplasmas from the Philippines and Thailand, Maize bushy stunt phytoplasma and Wheat blue dwarf phytoplasma belonging to the ‘Candidatus Phytoplasma asteris' (16SrI) group. This is the first report of 16SrI group phytoplasmas infecting rice in India. © Australasian Plant Pathology Society Inc. 2013 |
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Abstract Rice (Oryza sativa L.,) is one of the most important cereal crops worldwide. In this study, phytoplasmas have been detected in symptomatic leaves of four varieties of rice using nested-PCR with primer pairs P1/P7 and R16F2n/R16R2, which amplified a 1.2 kb fragment of the 16S rRNA gene. The nucleotide sequence analysis of the fragment had 100 % identity among the sequences from the four varieties (GenBank Accession numbers: JX290545, JX290546, JX290547 and JX290548) and 99 % nucleotide sequence identity with 16S rRNA gene sequences of the Rice orange leaf disease phytoplasmas from the Philippines and Thailand, Maize bushy stunt phytoplasma and Wheat blue dwarf phytoplasma belonging to the ‘Candidatus Phytoplasma asteris' (16SrI) group. This is the first report of 16SrI group phytoplasmas infecting rice in India. © Australasian Plant Pathology Society Inc. 2013 |
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Abstract Rice (Oryza sativa L.,) is one of the most important cereal crops worldwide. In this study, phytoplasmas have been detected in symptomatic leaves of four varieties of rice using nested-PCR with primer pairs P1/P7 and R16F2n/R16R2, which amplified a 1.2 kb fragment of the 16S rRNA gene. The nucleotide sequence analysis of the fragment had 100 % identity among the sequences from the four varieties (GenBank Accession numbers: JX290545, JX290546, JX290547 and JX290548) and 99 % nucleotide sequence identity with 16S rRNA gene sequences of the Rice orange leaf disease phytoplasmas from the Philippines and Thailand, Maize bushy stunt phytoplasma and Wheat blue dwarf phytoplasma belonging to the ‘Candidatus Phytoplasma asteris' (16SrI) group. This is the first report of 16SrI group phytoplasmas infecting rice in India. © Australasian Plant Pathology Society Inc. 2013 |
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