Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S

Abstract This genome report describes the draft genome and the physiological characteristics of Desulfitobacterium hafniense PCE-S, a Gram-positive bacterium known to dechlorinate tetrachloroethene (PCE) to dichloroethene by a PCE reductive dehalogenase. The draft genome has a size of 5,666,696 bp w...
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Autor*in:	Goris, Tobias [verfasserIn] Hornung, Bastian Kruse, Thomas Reinhold, Anika Westermann, Martin Schaap, Peter J Smidt, Hauke Diekert, Gabriele

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2015

Schlagwörter:	Anaerobic respiration Organohalide respiration Reductive dechlorination Chlorinated ethenes Chlorinated phenols Bioremediation Reductive dehalogenase

Anmerkung:	© Goris et al.; licensee BioMed Central. 2015

Übergeordnetes Werk:	Enthalten in: Standards in genomic sciences - [S.l.] : BioMed Central, 2009, 10(2015), 1 vom: 24. Feb.
Übergeordnetes Werk:	volume:10 ; year:2015 ; number:1 ; day:24 ; month:02

Links:	Volltext

DOI / URN:	10.1186/1944-3277-10-15

Katalog-ID:	SPR037764934

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allfields	10.1186/1944-3277-10-15 doi (DE-627)SPR037764934 (SPR)1944-3277-10-15-e DE-627 ger DE-627 rakwb eng Goris, Tobias verfasserin aut Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Goris et al.; licensee BioMed Central. 2015 Abstract This genome report describes the draft genome and the physiological characteristics of Desulfitobacterium hafniense PCE-S, a Gram-positive bacterium known to dechlorinate tetrachloroethene (PCE) to dichloroethene by a PCE reductive dehalogenase. The draft genome has a size of 5,666,696 bp with a G + C content of 47.3%. The genome is very similar to the already sequenced Desulfitobacterium hafniense Y51 and the type strain DCB-2. We identified two complete reductive dehalogenase (rdh) genes in the genome of D. hafniense PCE-S, one of which encodes PceA, the PCE reductive dehalogenase, and is located on a transposon. Interestingly, this transposon structure differs from the PceA-containing transposon of D. hafniense Y51. The second rdh encodes an unknown reductive dehalogenase, highly similar to rdhA 7 found in D. hafniense DCB-2, in which the corresponding gene is disrupted. This reductive dehalogenase might be responsible for the reductive dechlorination of 2,4,5-trichlorophenol and pentachlorophenol, which is mediated by D. hafniense PCE-S in addition to the reductive dechlorination of PCE. Anaerobic respiration (dpeaa)DE-He213 Organohalide respiration (dpeaa)DE-He213 Reductive dechlorination (dpeaa)DE-He213 Chlorinated ethenes (dpeaa)DE-He213 Chlorinated phenols (dpeaa)DE-He213 Bioremediation (dpeaa)DE-He213 Reductive dehalogenase (dpeaa)DE-He213 Hornung, Bastian aut Kruse, Thomas aut Reinhold, Anika aut Westermann, Martin aut Schaap, Peter J aut Smidt, Hauke aut Diekert, Gabriele aut Enthalten in Standards in genomic sciences [S.l.] : BioMed Central, 2009 10(2015), 1 vom: 24. Feb. (DE-627)642436444 (DE-600)2586662-X 1944-3277 nnns volume:10 year:2015 number:1 day:24 month:02 https://dx.doi.org/10.1186/1944-3277-10-15 kostenfrei Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_20 GBV_ILN_21 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2015 1 24 02
spelling	10.1186/1944-3277-10-15 doi (DE-627)SPR037764934 (SPR)1944-3277-10-15-e DE-627 ger DE-627 rakwb eng Goris, Tobias verfasserin aut Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Goris et al.; licensee BioMed Central. 2015 Abstract This genome report describes the draft genome and the physiological characteristics of Desulfitobacterium hafniense PCE-S, a Gram-positive bacterium known to dechlorinate tetrachloroethene (PCE) to dichloroethene by a PCE reductive dehalogenase. The draft genome has a size of 5,666,696 bp with a G + C content of 47.3%. The genome is very similar to the already sequenced Desulfitobacterium hafniense Y51 and the type strain DCB-2. We identified two complete reductive dehalogenase (rdh) genes in the genome of D. hafniense PCE-S, one of which encodes PceA, the PCE reductive dehalogenase, and is located on a transposon. Interestingly, this transposon structure differs from the PceA-containing transposon of D. hafniense Y51. The second rdh encodes an unknown reductive dehalogenase, highly similar to rdhA 7 found in D. hafniense DCB-2, in which the corresponding gene is disrupted. This reductive dehalogenase might be responsible for the reductive dechlorination of 2,4,5-trichlorophenol and pentachlorophenol, which is mediated by D. hafniense PCE-S in addition to the reductive dechlorination of PCE. Anaerobic respiration (dpeaa)DE-He213 Organohalide respiration (dpeaa)DE-He213 Reductive dechlorination (dpeaa)DE-He213 Chlorinated ethenes (dpeaa)DE-He213 Chlorinated phenols (dpeaa)DE-He213 Bioremediation (dpeaa)DE-He213 Reductive dehalogenase (dpeaa)DE-He213 Hornung, Bastian aut Kruse, Thomas aut Reinhold, Anika aut Westermann, Martin aut Schaap, Peter J aut Smidt, Hauke aut Diekert, Gabriele aut Enthalten in Standards in genomic sciences [S.l.] : BioMed Central, 2009 10(2015), 1 vom: 24. Feb. (DE-627)642436444 (DE-600)2586662-X 1944-3277 nnns volume:10 year:2015 number:1 day:24 month:02 https://dx.doi.org/10.1186/1944-3277-10-15 kostenfrei Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_20 GBV_ILN_21 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2015 1 24 02
allfields_unstemmed	10.1186/1944-3277-10-15 doi (DE-627)SPR037764934 (SPR)1944-3277-10-15-e DE-627 ger DE-627 rakwb eng Goris, Tobias verfasserin aut Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Goris et al.; licensee BioMed Central. 2015 Abstract This genome report describes the draft genome and the physiological characteristics of Desulfitobacterium hafniense PCE-S, a Gram-positive bacterium known to dechlorinate tetrachloroethene (PCE) to dichloroethene by a PCE reductive dehalogenase. The draft genome has a size of 5,666,696 bp with a G + C content of 47.3%. The genome is very similar to the already sequenced Desulfitobacterium hafniense Y51 and the type strain DCB-2. We identified two complete reductive dehalogenase (rdh) genes in the genome of D. hafniense PCE-S, one of which encodes PceA, the PCE reductive dehalogenase, and is located on a transposon. Interestingly, this transposon structure differs from the PceA-containing transposon of D. hafniense Y51. The second rdh encodes an unknown reductive dehalogenase, highly similar to rdhA 7 found in D. hafniense DCB-2, in which the corresponding gene is disrupted. This reductive dehalogenase might be responsible for the reductive dechlorination of 2,4,5-trichlorophenol and pentachlorophenol, which is mediated by D. hafniense PCE-S in addition to the reductive dechlorination of PCE. Anaerobic respiration (dpeaa)DE-He213 Organohalide respiration (dpeaa)DE-He213 Reductive dechlorination (dpeaa)DE-He213 Chlorinated ethenes (dpeaa)DE-He213 Chlorinated phenols (dpeaa)DE-He213 Bioremediation (dpeaa)DE-He213 Reductive dehalogenase (dpeaa)DE-He213 Hornung, Bastian aut Kruse, Thomas aut Reinhold, Anika aut Westermann, Martin aut Schaap, Peter J aut Smidt, Hauke aut Diekert, Gabriele aut Enthalten in Standards in genomic sciences [S.l.] : BioMed Central, 2009 10(2015), 1 vom: 24. Feb. (DE-627)642436444 (DE-600)2586662-X 1944-3277 nnns volume:10 year:2015 number:1 day:24 month:02 https://dx.doi.org/10.1186/1944-3277-10-15 kostenfrei Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_20 GBV_ILN_21 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2015 1 24 02
allfieldsGer	10.1186/1944-3277-10-15 doi (DE-627)SPR037764934 (SPR)1944-3277-10-15-e DE-627 ger DE-627 rakwb eng Goris, Tobias verfasserin aut Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Goris et al.; licensee BioMed Central. 2015 Abstract This genome report describes the draft genome and the physiological characteristics of Desulfitobacterium hafniense PCE-S, a Gram-positive bacterium known to dechlorinate tetrachloroethene (PCE) to dichloroethene by a PCE reductive dehalogenase. The draft genome has a size of 5,666,696 bp with a G + C content of 47.3%. The genome is very similar to the already sequenced Desulfitobacterium hafniense Y51 and the type strain DCB-2. We identified two complete reductive dehalogenase (rdh) genes in the genome of D. hafniense PCE-S, one of which encodes PceA, the PCE reductive dehalogenase, and is located on a transposon. Interestingly, this transposon structure differs from the PceA-containing transposon of D. hafniense Y51. The second rdh encodes an unknown reductive dehalogenase, highly similar to rdhA 7 found in D. hafniense DCB-2, in which the corresponding gene is disrupted. This reductive dehalogenase might be responsible for the reductive dechlorination of 2,4,5-trichlorophenol and pentachlorophenol, which is mediated by D. hafniense PCE-S in addition to the reductive dechlorination of PCE. Anaerobic respiration (dpeaa)DE-He213 Organohalide respiration (dpeaa)DE-He213 Reductive dechlorination (dpeaa)DE-He213 Chlorinated ethenes (dpeaa)DE-He213 Chlorinated phenols (dpeaa)DE-He213 Bioremediation (dpeaa)DE-He213 Reductive dehalogenase (dpeaa)DE-He213 Hornung, Bastian aut Kruse, Thomas aut Reinhold, Anika aut Westermann, Martin aut Schaap, Peter J aut Smidt, Hauke aut Diekert, Gabriele aut Enthalten in Standards in genomic sciences [S.l.] : BioMed Central, 2009 10(2015), 1 vom: 24. Feb. (DE-627)642436444 (DE-600)2586662-X 1944-3277 nnns volume:10 year:2015 number:1 day:24 month:02 https://dx.doi.org/10.1186/1944-3277-10-15 kostenfrei Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_20 GBV_ILN_21 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2015 1 24 02
allfieldsSound	10.1186/1944-3277-10-15 doi (DE-627)SPR037764934 (SPR)1944-3277-10-15-e DE-627 ger DE-627 rakwb eng Goris, Tobias verfasserin aut Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S 2015 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © Goris et al.; licensee BioMed Central. 2015 Abstract This genome report describes the draft genome and the physiological characteristics of Desulfitobacterium hafniense PCE-S, a Gram-positive bacterium known to dechlorinate tetrachloroethene (PCE) to dichloroethene by a PCE reductive dehalogenase. The draft genome has a size of 5,666,696 bp with a G + C content of 47.3%. The genome is very similar to the already sequenced Desulfitobacterium hafniense Y51 and the type strain DCB-2. We identified two complete reductive dehalogenase (rdh) genes in the genome of D. hafniense PCE-S, one of which encodes PceA, the PCE reductive dehalogenase, and is located on a transposon. Interestingly, this transposon structure differs from the PceA-containing transposon of D. hafniense Y51. The second rdh encodes an unknown reductive dehalogenase, highly similar to rdhA 7 found in D. hafniense DCB-2, in which the corresponding gene is disrupted. This reductive dehalogenase might be responsible for the reductive dechlorination of 2,4,5-trichlorophenol and pentachlorophenol, which is mediated by D. hafniense PCE-S in addition to the reductive dechlorination of PCE. Anaerobic respiration (dpeaa)DE-He213 Organohalide respiration (dpeaa)DE-He213 Reductive dechlorination (dpeaa)DE-He213 Chlorinated ethenes (dpeaa)DE-He213 Chlorinated phenols (dpeaa)DE-He213 Bioremediation (dpeaa)DE-He213 Reductive dehalogenase (dpeaa)DE-He213 Hornung, Bastian aut Kruse, Thomas aut Reinhold, Anika aut Westermann, Martin aut Schaap, Peter J aut Smidt, Hauke aut Diekert, Gabriele aut Enthalten in Standards in genomic sciences [S.l.] : BioMed Central, 2009 10(2015), 1 vom: 24. Feb. (DE-627)642436444 (DE-600)2586662-X 1944-3277 nnns volume:10 year:2015 number:1 day:24 month:02 https://dx.doi.org/10.1186/1944-3277-10-15 kostenfrei Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER SSG-OLC-PHA GBV_ILN_20 GBV_ILN_21 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_39 GBV_ILN_40 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_170 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2005 GBV_ILN_2009 GBV_ILN_2014 GBV_ILN_2055 GBV_ILN_2111 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 10 2015 1 24 02
language	English
source	Enthalten in Standards in genomic sciences 10(2015), 1 vom: 24. Feb. volume:10 year:2015 number:1 day:24 month:02
sourceStr	Enthalten in Standards in genomic sciences 10(2015), 1 vom: 24. Feb. volume:10 year:2015 number:1 day:24 month:02
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institution	findex.gbv.de
topic_facet	Anaerobic respiration Organohalide respiration Reductive dechlorination Chlorinated ethenes Chlorinated phenols Bioremediation Reductive dehalogenase
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container_title	Standards in genomic sciences
authorswithroles_txt_mv	Goris, Tobias @@aut@@ Hornung, Bastian @@aut@@ Kruse, Thomas @@aut@@ Reinhold, Anika @@aut@@ Westermann, Martin @@aut@@ Schaap, Peter J @@aut@@ Smidt, Hauke @@aut@@ Diekert, Gabriele @@aut@@
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author	Goris, Tobias
spellingShingle	Goris, Tobias misc Anaerobic respiration misc Organohalide respiration misc Reductive dechlorination misc Chlorinated ethenes misc Chlorinated phenols misc Bioremediation misc Reductive dehalogenase Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S
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topic_title	Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S Anaerobic respiration (dpeaa)DE-He213 Organohalide respiration (dpeaa)DE-He213 Reductive dechlorination (dpeaa)DE-He213 Chlorinated ethenes (dpeaa)DE-He213 Chlorinated phenols (dpeaa)DE-He213 Bioremediation (dpeaa)DE-He213 Reductive dehalogenase (dpeaa)DE-He213
topic	misc Anaerobic respiration misc Organohalide respiration misc Reductive dechlorination misc Chlorinated ethenes misc Chlorinated phenols misc Bioremediation misc Reductive dehalogenase
topic_unstemmed	misc Anaerobic respiration misc Organohalide respiration misc Reductive dechlorination misc Chlorinated ethenes misc Chlorinated phenols misc Bioremediation misc Reductive dehalogenase
topic_browse	misc Anaerobic respiration misc Organohalide respiration misc Reductive dechlorination misc Chlorinated ethenes misc Chlorinated phenols misc Bioremediation misc Reductive dehalogenase
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title	Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S
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title_full	Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S
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title_sort	draft genome sequence and characterization of desulfitobacterium hafniense pce-s
title_auth	Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S
abstract	Abstract This genome report describes the draft genome and the physiological characteristics of Desulfitobacterium hafniense PCE-S, a Gram-positive bacterium known to dechlorinate tetrachloroethene (PCE) to dichloroethene by a PCE reductive dehalogenase. The draft genome has a size of 5,666,696 bp with a G + C content of 47.3%. The genome is very similar to the already sequenced Desulfitobacterium hafniense Y51 and the type strain DCB-2. We identified two complete reductive dehalogenase (rdh) genes in the genome of D. hafniense PCE-S, one of which encodes PceA, the PCE reductive dehalogenase, and is located on a transposon. Interestingly, this transposon structure differs from the PceA-containing transposon of D. hafniense Y51. The second rdh encodes an unknown reductive dehalogenase, highly similar to rdhA 7 found in D. hafniense DCB-2, in which the corresponding gene is disrupted. This reductive dehalogenase might be responsible for the reductive dechlorination of 2,4,5-trichlorophenol and pentachlorophenol, which is mediated by D. hafniense PCE-S in addition to the reductive dechlorination of PCE. © Goris et al.; licensee BioMed Central. 2015
abstractGer	Abstract This genome report describes the draft genome and the physiological characteristics of Desulfitobacterium hafniense PCE-S, a Gram-positive bacterium known to dechlorinate tetrachloroethene (PCE) to dichloroethene by a PCE reductive dehalogenase. The draft genome has a size of 5,666,696 bp with a G + C content of 47.3%. The genome is very similar to the already sequenced Desulfitobacterium hafniense Y51 and the type strain DCB-2. We identified two complete reductive dehalogenase (rdh) genes in the genome of D. hafniense PCE-S, one of which encodes PceA, the PCE reductive dehalogenase, and is located on a transposon. Interestingly, this transposon structure differs from the PceA-containing transposon of D. hafniense Y51. The second rdh encodes an unknown reductive dehalogenase, highly similar to rdhA 7 found in D. hafniense DCB-2, in which the corresponding gene is disrupted. This reductive dehalogenase might be responsible for the reductive dechlorination of 2,4,5-trichlorophenol and pentachlorophenol, which is mediated by D. hafniense PCE-S in addition to the reductive dechlorination of PCE. © Goris et al.; licensee BioMed Central. 2015
abstract_unstemmed	Abstract This genome report describes the draft genome and the physiological characteristics of Desulfitobacterium hafniense PCE-S, a Gram-positive bacterium known to dechlorinate tetrachloroethene (PCE) to dichloroethene by a PCE reductive dehalogenase. The draft genome has a size of 5,666,696 bp with a G + C content of 47.3%. The genome is very similar to the already sequenced Desulfitobacterium hafniense Y51 and the type strain DCB-2. We identified two complete reductive dehalogenase (rdh) genes in the genome of D. hafniense PCE-S, one of which encodes PceA, the PCE reductive dehalogenase, and is located on a transposon. Interestingly, this transposon structure differs from the PceA-containing transposon of D. hafniense Y51. The second rdh encodes an unknown reductive dehalogenase, highly similar to rdhA 7 found in D. hafniense DCB-2, in which the corresponding gene is disrupted. This reductive dehalogenase might be responsible for the reductive dechlorination of 2,4,5-trichlorophenol and pentachlorophenol, which is mediated by D. hafniense PCE-S in addition to the reductive dechlorination of PCE. © Goris et al.; licensee BioMed Central. 2015
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title_short	Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S
url	https://dx.doi.org/10.1186/1944-3277-10-15
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author2	Hornung, Bastian Kruse, Thomas Reinhold, Anika Westermann, Martin Schaap, Peter J Smidt, Hauke Diekert, Gabriele
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up_date	2024-07-03T14:16:20.718Z
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This reductive dehalogenase might be responsible for the reductive dechlorination of 2,4,5-trichlorophenol and pentachlorophenol, which is mediated by D. hafniense PCE-S in addition to the reductive dechlorination of PCE.</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Anaerobic respiration</subfield><subfield code="7">(dpeaa)DE-He213</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Organohalide respiration</subfield><subfield code="7">(dpeaa)DE-He213</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Reductive dechlorination</subfield><subfield code="7">(dpeaa)DE-He213</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Chlorinated ethenes</subfield><subfield code="7">(dpeaa)DE-He213</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Chlorinated phenols</subfield><subfield code="7">(dpeaa)DE-He213</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Bioremediation</subfield><subfield code="7">(dpeaa)DE-He213</subfield></datafield><datafield tag="650" ind1=" " ind2="4"><subfield code="a">Reductive dehalogenase</subfield><subfield code="7">(dpeaa)DE-He213</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Hornung, Bastian</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Kruse, Thomas</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Reinhold, Anika</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Westermann, Martin</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Schaap, Peter J</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Smidt, Hauke</subfield><subfield code="4">aut</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Diekert, Gabriele</subfield><subfield code="4">aut</subfield></datafield><datafield tag="773" ind1="0" ind2="8"><subfield code="i">Enthalten in</subfield><subfield code="t">Standards in genomic sciences</subfield><subfield code="d">[S.l.] : BioMed Central, 2009</subfield><subfield code="g">10(2015), 1 vom: 24. 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Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S

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