Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles
Abstract Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton vari...
Ausführliche Beschreibung
Gespeichert in:
| Autor*in: |
Han, Peng [verfasserIn] |
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| Format: |
E-Artikel |
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| Sprache: |
Englisch |
| Erschienen: |
2022 |
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| Schlagwörter: |
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| Anmerkung: |
© The Author(s), under exclusive licence to Springer Nature B.V. 2022 |
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| Übergeordnetes Werk: |
Enthalten in: Genetic resources and crop evolution - Dordrecht [u.a.] : Springer Science + Business Media B.V, 1953, 69(2022), 7 vom: 08. Apr., Seite 2399-2411 |
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| Übergeordnetes Werk: |
volume:69 ; year:2022 ; number:7 ; day:08 ; month:04 ; pages:2399-2411 |
| Links: |
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| DOI / URN: |
10.1007/s10722-022-01379-6 |
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SPR04790223X |
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| 245 | 1 | 0 | |a Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles |
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| 520 | |a Abstract Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. Thus, our study laid the groundwork for cotton germplasm resource collection and preservation, and cotton research and breeding. | ||
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10.1007/s10722-022-01379-6 doi (DE-627)SPR04790223X (SPR)s10722-022-01379-6-e DE-627 ger DE-627 rakwb eng Han, Peng verfasserin aut Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s), under exclusive licence to Springer Nature B.V. 2022 Abstract Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. Thus, our study laid the groundwork for cotton germplasm resource collection and preservation, and cotton research and breeding. Core germplasm bank (dpeaa)DE-He213 Favorable alleles (dpeaa)DE-He213 Genotype (dpeaa)DE-He213 Phenotype (dpeaa)DE-He213 Upland cotton (dpeaa)DE-He213 Tian, Xiaomin aut Wang, Ying aut Huang, Cong aut Ma, Yizan aut Zhou, Xiaofeng aut Yu, Yu aut Zhang, Dawei aut Xu, Haijiang aut Cao, Yang aut Zhu, Bo aut Feng, Zhenxiu aut He, Shoupu aut Du, Xiongming aut Lin, Zhongxu aut Zhu, Longfu aut You, Chunyuan aut Pan, Zhenyuan aut Nie, Xinhui aut Enthalten in Genetic resources and crop evolution Dordrecht [u.a.] : Springer Science + Business Media B.V, 1953 69(2022), 7 vom: 08. Apr., Seite 2399-2411 (DE-627)320529029 (DE-600)2015535-9 1573-5109 nnns volume:69 year:2022 number:7 day:08 month:04 pages:2399-2411 https://dx.doi.org/10.1007/s10722-022-01379-6 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_165 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_211 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_647 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2118 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 69 2022 7 08 04 2399-2411 |
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10.1007/s10722-022-01379-6 doi (DE-627)SPR04790223X (SPR)s10722-022-01379-6-e DE-627 ger DE-627 rakwb eng Han, Peng verfasserin aut Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s), under exclusive licence to Springer Nature B.V. 2022 Abstract Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. Thus, our study laid the groundwork for cotton germplasm resource collection and preservation, and cotton research and breeding. Core germplasm bank (dpeaa)DE-He213 Favorable alleles (dpeaa)DE-He213 Genotype (dpeaa)DE-He213 Phenotype (dpeaa)DE-He213 Upland cotton (dpeaa)DE-He213 Tian, Xiaomin aut Wang, Ying aut Huang, Cong aut Ma, Yizan aut Zhou, Xiaofeng aut Yu, Yu aut Zhang, Dawei aut Xu, Haijiang aut Cao, Yang aut Zhu, Bo aut Feng, Zhenxiu aut He, Shoupu aut Du, Xiongming aut Lin, Zhongxu aut Zhu, Longfu aut You, Chunyuan aut Pan, Zhenyuan aut Nie, Xinhui aut Enthalten in Genetic resources and crop evolution Dordrecht [u.a.] : Springer Science + Business Media B.V, 1953 69(2022), 7 vom: 08. Apr., Seite 2399-2411 (DE-627)320529029 (DE-600)2015535-9 1573-5109 nnns volume:69 year:2022 number:7 day:08 month:04 pages:2399-2411 https://dx.doi.org/10.1007/s10722-022-01379-6 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_165 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_211 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_647 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2118 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 69 2022 7 08 04 2399-2411 |
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10.1007/s10722-022-01379-6 doi (DE-627)SPR04790223X (SPR)s10722-022-01379-6-e DE-627 ger DE-627 rakwb eng Han, Peng verfasserin aut Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s), under exclusive licence to Springer Nature B.V. 2022 Abstract Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. Thus, our study laid the groundwork for cotton germplasm resource collection and preservation, and cotton research and breeding. Core germplasm bank (dpeaa)DE-He213 Favorable alleles (dpeaa)DE-He213 Genotype (dpeaa)DE-He213 Phenotype (dpeaa)DE-He213 Upland cotton (dpeaa)DE-He213 Tian, Xiaomin aut Wang, Ying aut Huang, Cong aut Ma, Yizan aut Zhou, Xiaofeng aut Yu, Yu aut Zhang, Dawei aut Xu, Haijiang aut Cao, Yang aut Zhu, Bo aut Feng, Zhenxiu aut He, Shoupu aut Du, Xiongming aut Lin, Zhongxu aut Zhu, Longfu aut You, Chunyuan aut Pan, Zhenyuan aut Nie, Xinhui aut Enthalten in Genetic resources and crop evolution Dordrecht [u.a.] : Springer Science + Business Media B.V, 1953 69(2022), 7 vom: 08. Apr., Seite 2399-2411 (DE-627)320529029 (DE-600)2015535-9 1573-5109 nnns volume:69 year:2022 number:7 day:08 month:04 pages:2399-2411 https://dx.doi.org/10.1007/s10722-022-01379-6 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_165 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_211 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_647 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2118 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 69 2022 7 08 04 2399-2411 |
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10.1007/s10722-022-01379-6 doi (DE-627)SPR04790223X (SPR)s10722-022-01379-6-e DE-627 ger DE-627 rakwb eng Han, Peng verfasserin aut Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s), under exclusive licence to Springer Nature B.V. 2022 Abstract Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. Thus, our study laid the groundwork for cotton germplasm resource collection and preservation, and cotton research and breeding. Core germplasm bank (dpeaa)DE-He213 Favorable alleles (dpeaa)DE-He213 Genotype (dpeaa)DE-He213 Phenotype (dpeaa)DE-He213 Upland cotton (dpeaa)DE-He213 Tian, Xiaomin aut Wang, Ying aut Huang, Cong aut Ma, Yizan aut Zhou, Xiaofeng aut Yu, Yu aut Zhang, Dawei aut Xu, Haijiang aut Cao, Yang aut Zhu, Bo aut Feng, Zhenxiu aut He, Shoupu aut Du, Xiongming aut Lin, Zhongxu aut Zhu, Longfu aut You, Chunyuan aut Pan, Zhenyuan aut Nie, Xinhui aut Enthalten in Genetic resources and crop evolution Dordrecht [u.a.] : Springer Science + Business Media B.V, 1953 69(2022), 7 vom: 08. Apr., Seite 2399-2411 (DE-627)320529029 (DE-600)2015535-9 1573-5109 nnns volume:69 year:2022 number:7 day:08 month:04 pages:2399-2411 https://dx.doi.org/10.1007/s10722-022-01379-6 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_165 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_211 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_647 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2118 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 69 2022 7 08 04 2399-2411 |
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10.1007/s10722-022-01379-6 doi (DE-627)SPR04790223X (SPR)s10722-022-01379-6-e DE-627 ger DE-627 rakwb eng Han, Peng verfasserin aut Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s), under exclusive licence to Springer Nature B.V. 2022 Abstract Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. Thus, our study laid the groundwork for cotton germplasm resource collection and preservation, and cotton research and breeding. Core germplasm bank (dpeaa)DE-He213 Favorable alleles (dpeaa)DE-He213 Genotype (dpeaa)DE-He213 Phenotype (dpeaa)DE-He213 Upland cotton (dpeaa)DE-He213 Tian, Xiaomin aut Wang, Ying aut Huang, Cong aut Ma, Yizan aut Zhou, Xiaofeng aut Yu, Yu aut Zhang, Dawei aut Xu, Haijiang aut Cao, Yang aut Zhu, Bo aut Feng, Zhenxiu aut He, Shoupu aut Du, Xiongming aut Lin, Zhongxu aut Zhu, Longfu aut You, Chunyuan aut Pan, Zhenyuan aut Nie, Xinhui aut Enthalten in Genetic resources and crop evolution Dordrecht [u.a.] : Springer Science + Business Media B.V, 1953 69(2022), 7 vom: 08. Apr., Seite 2399-2411 (DE-627)320529029 (DE-600)2015535-9 1573-5109 nnns volume:69 year:2022 number:7 day:08 month:04 pages:2399-2411 https://dx.doi.org/10.1007/s10722-022-01379-6 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_165 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_211 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_647 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2118 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 69 2022 7 08 04 2399-2411 |
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Enthalten in Genetic resources and crop evolution 69(2022), 7 vom: 08. Apr., Seite 2399-2411 volume:69 year:2022 number:7 day:08 month:04 pages:2399-2411 |
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Enthalten in Genetic resources and crop evolution 69(2022), 7 vom: 08. Apr., Seite 2399-2411 volume:69 year:2022 number:7 day:08 month:04 pages:2399-2411 |
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Han, Peng @@aut@@ Tian, Xiaomin @@aut@@ Wang, Ying @@aut@@ Huang, Cong @@aut@@ Ma, Yizan @@aut@@ Zhou, Xiaofeng @@aut@@ Yu, Yu @@aut@@ Zhang, Dawei @@aut@@ Xu, Haijiang @@aut@@ Cao, Yang @@aut@@ Zhu, Bo @@aut@@ Feng, Zhenxiu @@aut@@ He, Shoupu @@aut@@ Du, Xiongming @@aut@@ Lin, Zhongxu @@aut@@ Zhu, Longfu @@aut@@ You, Chunyuan @@aut@@ Pan, Zhenyuan @@aut@@ Nie, Xinhui @@aut@@ |
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In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. 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Han, Peng |
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Han, Peng misc Core germplasm bank misc Favorable alleles misc Genotype misc Phenotype misc Upland cotton Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles |
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Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles Core germplasm bank (dpeaa)DE-He213 Favorable alleles (dpeaa)DE-He213 Genotype (dpeaa)DE-He213 Phenotype (dpeaa)DE-He213 Upland cotton (dpeaa)DE-He213 |
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Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles |
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Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles |
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Han, Peng Tian, Xiaomin Wang, Ying Huang, Cong Ma, Yizan Zhou, Xiaofeng Yu, Yu Zhang, Dawei Xu, Haijiang Cao, Yang Zhu, Bo Feng, Zhenxiu He, Shoupu Du, Xiongming Lin, Zhongxu Zhu, Longfu You, Chunyuan Pan, Zhenyuan Nie, Xinhui |
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Han, Peng |
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10.1007/s10722-022-01379-6 |
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construction of a core germplasm bank of upland cotton (gossypium hirsutum l.) based on phenotype, genotype and favorable alleles |
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Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles |
| abstract |
Abstract Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. Thus, our study laid the groundwork for cotton germplasm resource collection and preservation, and cotton research and breeding. © The Author(s), under exclusive licence to Springer Nature B.V. 2022 |
| abstractGer |
Abstract Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. Thus, our study laid the groundwork for cotton germplasm resource collection and preservation, and cotton research and breeding. © The Author(s), under exclusive licence to Springer Nature B.V. 2022 |
| abstract_unstemmed |
Abstract Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. Thus, our study laid the groundwork for cotton germplasm resource collection and preservation, and cotton research and breeding. © The Author(s), under exclusive licence to Springer Nature B.V. 2022 |
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Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles |
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Tian, Xiaomin Wang, Ying Huang, Cong Ma, Yizan Zhou, Xiaofeng Yu, Yu Zhang, Dawei Xu, Haijiang Cao, Yang Zhu, Bo Feng, Zhenxiu He, Shoupu Du, Xiongming Lin, Zhongxu Zhu, Longfu You, Chunyuan Pan, Zhenyuan Nie, Xinhui |
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| score |
7.400366 |