NDP-Sugar Pathways Overview of Spirodela polyrhiza and Their Relevance for Bioenergy and Biorefinery
Abstract Duckweeds are fast-growing aquatic plants suitable for bioenergy due to fermentable-rich biomass with low lignin and unique cell wall. The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pa...
Ausführliche Beschreibung
Gespeichert in:
| Autor*in: |
Pagliuso, Débora [verfasserIn] |
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| Format: |
E-Artikel |
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| Sprache: |
Englisch |
| Erschienen: |
2022 |
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| Schlagwörter: |
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| Anmerkung: |
© The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 |
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| Übergeordnetes Werk: |
Enthalten in: BioEnergy research - New York, NY : Springer, 2008, 15(2022), 3 vom: 10. Jan., Seite 1531-1544 |
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| Übergeordnetes Werk: |
volume:15 ; year:2022 ; number:3 ; day:10 ; month:01 ; pages:1531-1544 |
| Links: |
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| DOI / URN: |
10.1007/s12155-021-10355-4 |
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SPR047986549 |
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| 520 | |a Abstract Duckweeds are fast-growing aquatic plants suitable for bioenergy due to fermentable-rich biomass with low lignin and unique cell wall. The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pathways by mapping the genes involved and their expression would be necessary for developing tools to improve bioenergy production. In this work, the genes associated with the NDP-sugar pathway (de novo and salvage) were mapped and correlated to the chemical characterization of the giant duckweed (Spirodela polyrhiza) cell wall. This plant biomass has been characterized as having 3% starch, 49% soluble sugars, 40% cell wall, and 8% non-measured compounds. The cell walls are synthesized by the NDP-sugar pathway and represent a significant carbon sink. This sink results from the action of proteins encoded by 190 orthologs of the 38 targets of the NDP-sugar pathway, of which 49 are starch and sucrose-related, 54 pectins-related, 65 hemicellulose-related, and 23 cellulose-related. Chemical analysis of the cell wall revealed 49% pectins, 23% hemicellulose, and 10% cellulose. These carbohydrates can potentially provide biorefinery as adjuvants, cosmetics, food additives, stabilizers, gelling agents, and principally as biofuels. | ||
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10.1007/s12155-021-10355-4 doi (DE-627)SPR047986549 (SPR)s12155-021-10355-4-e DE-627 ger DE-627 rakwb eng Pagliuso, Débora verfasserin (orcid)0000-0002-4691-6167 aut NDP-Sugar Pathways Overview of Spirodela polyrhiza and Their Relevance for Bioenergy and Biorefinery 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 Abstract Duckweeds are fast-growing aquatic plants suitable for bioenergy due to fermentable-rich biomass with low lignin and unique cell wall. The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pathways by mapping the genes involved and their expression would be necessary for developing tools to improve bioenergy production. In this work, the genes associated with the NDP-sugar pathway (de novo and salvage) were mapped and correlated to the chemical characterization of the giant duckweed (Spirodela polyrhiza) cell wall. This plant biomass has been characterized as having 3% starch, 49% soluble sugars, 40% cell wall, and 8% non-measured compounds. The cell walls are synthesized by the NDP-sugar pathway and represent a significant carbon sink. This sink results from the action of proteins encoded by 190 orthologs of the 38 targets of the NDP-sugar pathway, of which 49 are starch and sucrose-related, 54 pectins-related, 65 hemicellulose-related, and 23 cellulose-related. Chemical analysis of the cell wall revealed 49% pectins, 23% hemicellulose, and 10% cellulose. These carbohydrates can potentially provide biorefinery as adjuvants, cosmetics, food additives, stabilizers, gelling agents, and principally as biofuels. Duckweed (dpeaa)DE-He213 Cell wall (dpeaa)DE-He213 Polysaccharides (dpeaa)DE-He213 Biofuels (dpeaa)DE-He213 Carbohydrate synthesis (dpeaa)DE-He213 Navarro, Bruno Viana (orcid)0000-0001-9289-4328 aut Grandis, Adriana (orcid)0000-0002-8416-3733 aut Zerillo, Marcelo M. (orcid)0000-0001-9671-2894 aut Lam, Eric (orcid)0000-0001-8462-9794 aut Buckeridge, Marcos Silveira (orcid)0000-0002-5455-8136 aut Enthalten in BioEnergy research New York, NY : Springer, 2008 15(2022), 3 vom: 10. Jan., Seite 1531-1544 (DE-627)565519727 (DE-600)2424546-X 1939-1242 nnns volume:15 year:2022 number:3 day:10 month:01 pages:1531-1544 https://dx.doi.org/10.1007/s12155-021-10355-4 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2118 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 15 2022 3 10 01 1531-1544 |
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10.1007/s12155-021-10355-4 doi (DE-627)SPR047986549 (SPR)s12155-021-10355-4-e DE-627 ger DE-627 rakwb eng Pagliuso, Débora verfasserin (orcid)0000-0002-4691-6167 aut NDP-Sugar Pathways Overview of Spirodela polyrhiza and Their Relevance for Bioenergy and Biorefinery 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 Abstract Duckweeds are fast-growing aquatic plants suitable for bioenergy due to fermentable-rich biomass with low lignin and unique cell wall. The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pathways by mapping the genes involved and their expression would be necessary for developing tools to improve bioenergy production. In this work, the genes associated with the NDP-sugar pathway (de novo and salvage) were mapped and correlated to the chemical characterization of the giant duckweed (Spirodela polyrhiza) cell wall. This plant biomass has been characterized as having 3% starch, 49% soluble sugars, 40% cell wall, and 8% non-measured compounds. The cell walls are synthesized by the NDP-sugar pathway and represent a significant carbon sink. This sink results from the action of proteins encoded by 190 orthologs of the 38 targets of the NDP-sugar pathway, of which 49 are starch and sucrose-related, 54 pectins-related, 65 hemicellulose-related, and 23 cellulose-related. Chemical analysis of the cell wall revealed 49% pectins, 23% hemicellulose, and 10% cellulose. These carbohydrates can potentially provide biorefinery as adjuvants, cosmetics, food additives, stabilizers, gelling agents, and principally as biofuels. Duckweed (dpeaa)DE-He213 Cell wall (dpeaa)DE-He213 Polysaccharides (dpeaa)DE-He213 Biofuels (dpeaa)DE-He213 Carbohydrate synthesis (dpeaa)DE-He213 Navarro, Bruno Viana (orcid)0000-0001-9289-4328 aut Grandis, Adriana (orcid)0000-0002-8416-3733 aut Zerillo, Marcelo M. (orcid)0000-0001-9671-2894 aut Lam, Eric (orcid)0000-0001-8462-9794 aut Buckeridge, Marcos Silveira (orcid)0000-0002-5455-8136 aut Enthalten in BioEnergy research New York, NY : Springer, 2008 15(2022), 3 vom: 10. Jan., Seite 1531-1544 (DE-627)565519727 (DE-600)2424546-X 1939-1242 nnns volume:15 year:2022 number:3 day:10 month:01 pages:1531-1544 https://dx.doi.org/10.1007/s12155-021-10355-4 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2118 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 15 2022 3 10 01 1531-1544 |
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10.1007/s12155-021-10355-4 doi (DE-627)SPR047986549 (SPR)s12155-021-10355-4-e DE-627 ger DE-627 rakwb eng Pagliuso, Débora verfasserin (orcid)0000-0002-4691-6167 aut NDP-Sugar Pathways Overview of Spirodela polyrhiza and Their Relevance for Bioenergy and Biorefinery 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 Abstract Duckweeds are fast-growing aquatic plants suitable for bioenergy due to fermentable-rich biomass with low lignin and unique cell wall. The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pathways by mapping the genes involved and their expression would be necessary for developing tools to improve bioenergy production. In this work, the genes associated with the NDP-sugar pathway (de novo and salvage) were mapped and correlated to the chemical characterization of the giant duckweed (Spirodela polyrhiza) cell wall. This plant biomass has been characterized as having 3% starch, 49% soluble sugars, 40% cell wall, and 8% non-measured compounds. The cell walls are synthesized by the NDP-sugar pathway and represent a significant carbon sink. This sink results from the action of proteins encoded by 190 orthologs of the 38 targets of the NDP-sugar pathway, of which 49 are starch and sucrose-related, 54 pectins-related, 65 hemicellulose-related, and 23 cellulose-related. Chemical analysis of the cell wall revealed 49% pectins, 23% hemicellulose, and 10% cellulose. These carbohydrates can potentially provide biorefinery as adjuvants, cosmetics, food additives, stabilizers, gelling agents, and principally as biofuels. Duckweed (dpeaa)DE-He213 Cell wall (dpeaa)DE-He213 Polysaccharides (dpeaa)DE-He213 Biofuels (dpeaa)DE-He213 Carbohydrate synthesis (dpeaa)DE-He213 Navarro, Bruno Viana (orcid)0000-0001-9289-4328 aut Grandis, Adriana (orcid)0000-0002-8416-3733 aut Zerillo, Marcelo M. (orcid)0000-0001-9671-2894 aut Lam, Eric (orcid)0000-0001-8462-9794 aut Buckeridge, Marcos Silveira (orcid)0000-0002-5455-8136 aut Enthalten in BioEnergy research New York, NY : Springer, 2008 15(2022), 3 vom: 10. Jan., Seite 1531-1544 (DE-627)565519727 (DE-600)2424546-X 1939-1242 nnns volume:15 year:2022 number:3 day:10 month:01 pages:1531-1544 https://dx.doi.org/10.1007/s12155-021-10355-4 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2118 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 15 2022 3 10 01 1531-1544 |
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10.1007/s12155-021-10355-4 doi (DE-627)SPR047986549 (SPR)s12155-021-10355-4-e DE-627 ger DE-627 rakwb eng Pagliuso, Débora verfasserin (orcid)0000-0002-4691-6167 aut NDP-Sugar Pathways Overview of Spirodela polyrhiza and Their Relevance for Bioenergy and Biorefinery 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 Abstract Duckweeds are fast-growing aquatic plants suitable for bioenergy due to fermentable-rich biomass with low lignin and unique cell wall. The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pathways by mapping the genes involved and their expression would be necessary for developing tools to improve bioenergy production. In this work, the genes associated with the NDP-sugar pathway (de novo and salvage) were mapped and correlated to the chemical characterization of the giant duckweed (Spirodela polyrhiza) cell wall. This plant biomass has been characterized as having 3% starch, 49% soluble sugars, 40% cell wall, and 8% non-measured compounds. The cell walls are synthesized by the NDP-sugar pathway and represent a significant carbon sink. This sink results from the action of proteins encoded by 190 orthologs of the 38 targets of the NDP-sugar pathway, of which 49 are starch and sucrose-related, 54 pectins-related, 65 hemicellulose-related, and 23 cellulose-related. Chemical analysis of the cell wall revealed 49% pectins, 23% hemicellulose, and 10% cellulose. These carbohydrates can potentially provide biorefinery as adjuvants, cosmetics, food additives, stabilizers, gelling agents, and principally as biofuels. Duckweed (dpeaa)DE-He213 Cell wall (dpeaa)DE-He213 Polysaccharides (dpeaa)DE-He213 Biofuels (dpeaa)DE-He213 Carbohydrate synthesis (dpeaa)DE-He213 Navarro, Bruno Viana (orcid)0000-0001-9289-4328 aut Grandis, Adriana (orcid)0000-0002-8416-3733 aut Zerillo, Marcelo M. (orcid)0000-0001-9671-2894 aut Lam, Eric (orcid)0000-0001-8462-9794 aut Buckeridge, Marcos Silveira (orcid)0000-0002-5455-8136 aut Enthalten in BioEnergy research New York, NY : Springer, 2008 15(2022), 3 vom: 10. Jan., Seite 1531-1544 (DE-627)565519727 (DE-600)2424546-X 1939-1242 nnns volume:15 year:2022 number:3 day:10 month:01 pages:1531-1544 https://dx.doi.org/10.1007/s12155-021-10355-4 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2118 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 15 2022 3 10 01 1531-1544 |
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10.1007/s12155-021-10355-4 doi (DE-627)SPR047986549 (SPR)s12155-021-10355-4-e DE-627 ger DE-627 rakwb eng Pagliuso, Débora verfasserin (orcid)0000-0002-4691-6167 aut NDP-Sugar Pathways Overview of Spirodela polyrhiza and Their Relevance for Bioenergy and Biorefinery 2022 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 Abstract Duckweeds are fast-growing aquatic plants suitable for bioenergy due to fermentable-rich biomass with low lignin and unique cell wall. The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pathways by mapping the genes involved and their expression would be necessary for developing tools to improve bioenergy production. In this work, the genes associated with the NDP-sugar pathway (de novo and salvage) were mapped and correlated to the chemical characterization of the giant duckweed (Spirodela polyrhiza) cell wall. This plant biomass has been characterized as having 3% starch, 49% soluble sugars, 40% cell wall, and 8% non-measured compounds. The cell walls are synthesized by the NDP-sugar pathway and represent a significant carbon sink. This sink results from the action of proteins encoded by 190 orthologs of the 38 targets of the NDP-sugar pathway, of which 49 are starch and sucrose-related, 54 pectins-related, 65 hemicellulose-related, and 23 cellulose-related. Chemical analysis of the cell wall revealed 49% pectins, 23% hemicellulose, and 10% cellulose. These carbohydrates can potentially provide biorefinery as adjuvants, cosmetics, food additives, stabilizers, gelling agents, and principally as biofuels. Duckweed (dpeaa)DE-He213 Cell wall (dpeaa)DE-He213 Polysaccharides (dpeaa)DE-He213 Biofuels (dpeaa)DE-He213 Carbohydrate synthesis (dpeaa)DE-He213 Navarro, Bruno Viana (orcid)0000-0001-9289-4328 aut Grandis, Adriana (orcid)0000-0002-8416-3733 aut Zerillo, Marcelo M. (orcid)0000-0001-9671-2894 aut Lam, Eric (orcid)0000-0001-8462-9794 aut Buckeridge, Marcos Silveira (orcid)0000-0002-5455-8136 aut Enthalten in BioEnergy research New York, NY : Springer, 2008 15(2022), 3 vom: 10. Jan., Seite 1531-1544 (DE-627)565519727 (DE-600)2424546-X 1939-1242 nnns volume:15 year:2022 number:3 day:10 month:01 pages:1531-1544 https://dx.doi.org/10.1007/s12155-021-10355-4 lizenzpflichtig Volltext GBV_USEFLAG_A SYSFLAG_A GBV_SPRINGER GBV_ILN_11 GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_31 GBV_ILN_32 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_74 GBV_ILN_90 GBV_ILN_95 GBV_ILN_100 GBV_ILN_105 GBV_ILN_110 GBV_ILN_120 GBV_ILN_138 GBV_ILN_150 GBV_ILN_151 GBV_ILN_152 GBV_ILN_161 GBV_ILN_170 GBV_ILN_171 GBV_ILN_187 GBV_ILN_213 GBV_ILN_224 GBV_ILN_230 GBV_ILN_250 GBV_ILN_281 GBV_ILN_285 GBV_ILN_293 GBV_ILN_370 GBV_ILN_602 GBV_ILN_636 GBV_ILN_702 GBV_ILN_2001 GBV_ILN_2003 GBV_ILN_2004 GBV_ILN_2005 GBV_ILN_2006 GBV_ILN_2007 GBV_ILN_2008 GBV_ILN_2009 GBV_ILN_2010 GBV_ILN_2011 GBV_ILN_2014 GBV_ILN_2015 GBV_ILN_2020 GBV_ILN_2021 GBV_ILN_2025 GBV_ILN_2026 GBV_ILN_2027 GBV_ILN_2031 GBV_ILN_2034 GBV_ILN_2037 GBV_ILN_2038 GBV_ILN_2039 GBV_ILN_2044 GBV_ILN_2048 GBV_ILN_2049 GBV_ILN_2050 GBV_ILN_2055 GBV_ILN_2056 GBV_ILN_2057 GBV_ILN_2059 GBV_ILN_2061 GBV_ILN_2064 GBV_ILN_2065 GBV_ILN_2068 GBV_ILN_2088 GBV_ILN_2093 GBV_ILN_2106 GBV_ILN_2107 GBV_ILN_2108 GBV_ILN_2110 GBV_ILN_2111 GBV_ILN_2112 GBV_ILN_2113 GBV_ILN_2118 GBV_ILN_2122 GBV_ILN_2129 GBV_ILN_2143 GBV_ILN_2144 GBV_ILN_2147 GBV_ILN_2148 GBV_ILN_2152 GBV_ILN_2153 GBV_ILN_2188 GBV_ILN_2190 GBV_ILN_2232 GBV_ILN_2336 GBV_ILN_2446 GBV_ILN_2470 GBV_ILN_2472 GBV_ILN_2507 GBV_ILN_2522 GBV_ILN_2548 GBV_ILN_4035 GBV_ILN_4037 GBV_ILN_4046 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4242 GBV_ILN_4246 GBV_ILN_4249 GBV_ILN_4251 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4326 GBV_ILN_4328 GBV_ILN_4333 GBV_ILN_4334 GBV_ILN_4335 GBV_ILN_4336 GBV_ILN_4338 GBV_ILN_4393 GBV_ILN_4700 AR 15 2022 3 10 01 1531-1544 |
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Enthalten in BioEnergy research 15(2022), 3 vom: 10. Jan., Seite 1531-1544 volume:15 year:2022 number:3 day:10 month:01 pages:1531-1544 |
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Pagliuso, Débora @@aut@@ Navarro, Bruno Viana @@aut@@ Grandis, Adriana @@aut@@ Zerillo, Marcelo M. @@aut@@ Lam, Eric @@aut@@ Buckeridge, Marcos Silveira @@aut@@ |
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The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pathways by mapping the genes involved and their expression would be necessary for developing tools to improve bioenergy production. In this work, the genes associated with the NDP-sugar pathway (de novo and salvage) were mapped and correlated to the chemical characterization of the giant duckweed (Spirodela polyrhiza) cell wall. This plant biomass has been characterized as having 3% starch, 49% soluble sugars, 40% cell wall, and 8% non-measured compounds. The cell walls are synthesized by the NDP-sugar pathway and represent a significant carbon sink. This sink results from the action of proteins encoded by 190 orthologs of the 38 targets of the NDP-sugar pathway, of which 49 are starch and sucrose-related, 54 pectins-related, 65 hemicellulose-related, and 23 cellulose-related. Chemical analysis of the cell wall revealed 49% pectins, 23% hemicellulose, and 10% cellulose. 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Pagliuso, Débora |
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Pagliuso, Débora misc Duckweed misc Cell wall misc Polysaccharides misc Biofuels misc Carbohydrate synthesis NDP-Sugar Pathways Overview of Spirodela polyrhiza and Their Relevance for Bioenergy and Biorefinery |
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NDP-Sugar Pathways Overview of Spirodela polyrhiza and Their Relevance for Bioenergy and Biorefinery Duckweed (dpeaa)DE-He213 Cell wall (dpeaa)DE-He213 Polysaccharides (dpeaa)DE-He213 Biofuels (dpeaa)DE-He213 Carbohydrate synthesis (dpeaa)DE-He213 |
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ndp-sugar pathways overview of spirodela polyrhiza and their relevance for bioenergy and biorefinery |
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NDP-Sugar Pathways Overview of Spirodela polyrhiza and Their Relevance for Bioenergy and Biorefinery |
| abstract |
Abstract Duckweeds are fast-growing aquatic plants suitable for bioenergy due to fermentable-rich biomass with low lignin and unique cell wall. The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pathways by mapping the genes involved and their expression would be necessary for developing tools to improve bioenergy production. In this work, the genes associated with the NDP-sugar pathway (de novo and salvage) were mapped and correlated to the chemical characterization of the giant duckweed (Spirodela polyrhiza) cell wall. This plant biomass has been characterized as having 3% starch, 49% soluble sugars, 40% cell wall, and 8% non-measured compounds. The cell walls are synthesized by the NDP-sugar pathway and represent a significant carbon sink. This sink results from the action of proteins encoded by 190 orthologs of the 38 targets of the NDP-sugar pathway, of which 49 are starch and sucrose-related, 54 pectins-related, 65 hemicellulose-related, and 23 cellulose-related. Chemical analysis of the cell wall revealed 49% pectins, 23% hemicellulose, and 10% cellulose. These carbohydrates can potentially provide biorefinery as adjuvants, cosmetics, food additives, stabilizers, gelling agents, and principally as biofuels. © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 |
| abstractGer |
Abstract Duckweeds are fast-growing aquatic plants suitable for bioenergy due to fermentable-rich biomass with low lignin and unique cell wall. The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pathways by mapping the genes involved and their expression would be necessary for developing tools to improve bioenergy production. In this work, the genes associated with the NDP-sugar pathway (de novo and salvage) were mapped and correlated to the chemical characterization of the giant duckweed (Spirodela polyrhiza) cell wall. This plant biomass has been characterized as having 3% starch, 49% soluble sugars, 40% cell wall, and 8% non-measured compounds. The cell walls are synthesized by the NDP-sugar pathway and represent a significant carbon sink. This sink results from the action of proteins encoded by 190 orthologs of the 38 targets of the NDP-sugar pathway, of which 49 are starch and sucrose-related, 54 pectins-related, 65 hemicellulose-related, and 23 cellulose-related. Chemical analysis of the cell wall revealed 49% pectins, 23% hemicellulose, and 10% cellulose. These carbohydrates can potentially provide biorefinery as adjuvants, cosmetics, food additives, stabilizers, gelling agents, and principally as biofuels. © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 |
| abstract_unstemmed |
Abstract Duckweeds are fast-growing aquatic plants suitable for bioenergy due to fermentable-rich biomass with low lignin and unique cell wall. The plant cell wall is built from pathways of nucleotide sugar genes that culminate in cell wall synthesis and deposition. Therefore, understanding these pathways by mapping the genes involved and their expression would be necessary for developing tools to improve bioenergy production. In this work, the genes associated with the NDP-sugar pathway (de novo and salvage) were mapped and correlated to the chemical characterization of the giant duckweed (Spirodela polyrhiza) cell wall. This plant biomass has been characterized as having 3% starch, 49% soluble sugars, 40% cell wall, and 8% non-measured compounds. The cell walls are synthesized by the NDP-sugar pathway and represent a significant carbon sink. This sink results from the action of proteins encoded by 190 orthologs of the 38 targets of the NDP-sugar pathway, of which 49 are starch and sucrose-related, 54 pectins-related, 65 hemicellulose-related, and 23 cellulose-related. Chemical analysis of the cell wall revealed 49% pectins, 23% hemicellulose, and 10% cellulose. These carbohydrates can potentially provide biorefinery as adjuvants, cosmetics, food additives, stabilizers, gelling agents, and principally as biofuels. © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 |
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| title_short |
NDP-Sugar Pathways Overview of Spirodela polyrhiza and Their Relevance for Bioenergy and Biorefinery |
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https://dx.doi.org/10.1007/s12155-021-10355-4 |
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Navarro, Bruno Viana Grandis, Adriana Zerillo, Marcelo M. Lam, Eric Buckeridge, Marcos Silveira |
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| score |
7.401595 |