Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae

<i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. c...
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Autor*in:	Lubna [verfasserIn] Sajjad Asaf [verfasserIn] Rahmatullah Jan [verfasserIn] Abdul Latif Khan [verfasserIn] In-Jung Lee [verfasserIn]

Format:	E-Artikel
Sprache:	Englisch

Erschienen:	2020

Schlagwörter:	Oxalidaceae chloroplast genome comparison inverted repeats divergence SSRs phylogeny

Übergeordnetes Werk:	In: Plants - MDPI AG, 2013, 9(2020), 8, p 928
Übergeordnetes Werk:	volume:9 ; year:2020 ; number:8, p 928

Links:	Link aufrufen Link aufrufen Link aufrufen Journal toc

DOI / URN:	10.3390/plants9080928

Katalog-ID:	DOAJ019796129

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520			\|a <i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. The complete <i<O. corniculata</i< genome sequenced in the present study is a valuable resource for investigating the population and evolutionary genetics of family Oxalidaceae and can be used to identify related species.
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allfields	10.3390/plants9080928 doi (DE-627)DOAJ019796129 (DE-599)DOAJc7ba4a8851494b09b8e5f560512e34cd DE-627 ger DE-627 rakwb eng QK1-989 Lubna verfasserin aut Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae 2020 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. The complete <i<O. corniculata</i< genome sequenced in the present study is a valuable resource for investigating the population and evolutionary genetics of family Oxalidaceae and can be used to identify related species. Oxalidaceae chloroplast genome comparison inverted repeats divergence SSRs phylogeny Botany Sajjad Asaf verfasserin aut Rahmatullah Jan verfasserin aut Abdul Latif Khan verfasserin aut In-Jung Lee verfasserin aut In Plants MDPI AG, 2013 9(2020), 8, p 928 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:9 year:2020 number:8, p 928 https://doi.org/10.3390/plants9080928 kostenfrei https://doaj.org/article/c7ba4a8851494b09b8e5f560512e34cd kostenfrei https://www.mdpi.com/2223-7747/9/8/928 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 9 2020 8, p 928
spelling	10.3390/plants9080928 doi (DE-627)DOAJ019796129 (DE-599)DOAJc7ba4a8851494b09b8e5f560512e34cd DE-627 ger DE-627 rakwb eng QK1-989 Lubna verfasserin aut Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae 2020 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. The complete <i<O. corniculata</i< genome sequenced in the present study is a valuable resource for investigating the population and evolutionary genetics of family Oxalidaceae and can be used to identify related species. Oxalidaceae chloroplast genome comparison inverted repeats divergence SSRs phylogeny Botany Sajjad Asaf verfasserin aut Rahmatullah Jan verfasserin aut Abdul Latif Khan verfasserin aut In-Jung Lee verfasserin aut In Plants MDPI AG, 2013 9(2020), 8, p 928 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:9 year:2020 number:8, p 928 https://doi.org/10.3390/plants9080928 kostenfrei https://doaj.org/article/c7ba4a8851494b09b8e5f560512e34cd kostenfrei https://www.mdpi.com/2223-7747/9/8/928 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 9 2020 8, p 928
allfields_unstemmed	10.3390/plants9080928 doi (DE-627)DOAJ019796129 (DE-599)DOAJc7ba4a8851494b09b8e5f560512e34cd DE-627 ger DE-627 rakwb eng QK1-989 Lubna verfasserin aut Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae 2020 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. The complete <i<O. corniculata</i< genome sequenced in the present study is a valuable resource for investigating the population and evolutionary genetics of family Oxalidaceae and can be used to identify related species. Oxalidaceae chloroplast genome comparison inverted repeats divergence SSRs phylogeny Botany Sajjad Asaf verfasserin aut Rahmatullah Jan verfasserin aut Abdul Latif Khan verfasserin aut In-Jung Lee verfasserin aut In Plants MDPI AG, 2013 9(2020), 8, p 928 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:9 year:2020 number:8, p 928 https://doi.org/10.3390/plants9080928 kostenfrei https://doaj.org/article/c7ba4a8851494b09b8e5f560512e34cd kostenfrei https://www.mdpi.com/2223-7747/9/8/928 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 9 2020 8, p 928
allfieldsGer	10.3390/plants9080928 doi (DE-627)DOAJ019796129 (DE-599)DOAJc7ba4a8851494b09b8e5f560512e34cd DE-627 ger DE-627 rakwb eng QK1-989 Lubna verfasserin aut Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae 2020 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. The complete <i<O. corniculata</i< genome sequenced in the present study is a valuable resource for investigating the population and evolutionary genetics of family Oxalidaceae and can be used to identify related species. Oxalidaceae chloroplast genome comparison inverted repeats divergence SSRs phylogeny Botany Sajjad Asaf verfasserin aut Rahmatullah Jan verfasserin aut Abdul Latif Khan verfasserin aut In-Jung Lee verfasserin aut In Plants MDPI AG, 2013 9(2020), 8, p 928 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:9 year:2020 number:8, p 928 https://doi.org/10.3390/plants9080928 kostenfrei https://doaj.org/article/c7ba4a8851494b09b8e5f560512e34cd kostenfrei https://www.mdpi.com/2223-7747/9/8/928 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 9 2020 8, p 928
allfieldsSound	10.3390/plants9080928 doi (DE-627)DOAJ019796129 (DE-599)DOAJc7ba4a8851494b09b8e5f560512e34cd DE-627 ger DE-627 rakwb eng QK1-989 Lubna verfasserin aut Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae 2020 Text txt rdacontent Computermedien c rdamedia Online-Ressource cr rdacarrier <i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. The complete <i<O. corniculata</i< genome sequenced in the present study is a valuable resource for investigating the population and evolutionary genetics of family Oxalidaceae and can be used to identify related species. Oxalidaceae chloroplast genome comparison inverted repeats divergence SSRs phylogeny Botany Sajjad Asaf verfasserin aut Rahmatullah Jan verfasserin aut Abdul Latif Khan verfasserin aut In-Jung Lee verfasserin aut In Plants MDPI AG, 2013 9(2020), 8, p 928 (DE-627)737288345 (DE-600)2704341-1 22237747 nnns volume:9 year:2020 number:8, p 928 https://doi.org/10.3390/plants9080928 kostenfrei https://doaj.org/article/c7ba4a8851494b09b8e5f560512e34cd kostenfrei https://www.mdpi.com/2223-7747/9/8/928 kostenfrei https://doaj.org/toc/2223-7747 Journal toc kostenfrei GBV_USEFLAG_A SYSFLAG_A GBV_DOAJ GBV_ILN_20 GBV_ILN_22 GBV_ILN_23 GBV_ILN_24 GBV_ILN_39 GBV_ILN_40 GBV_ILN_60 GBV_ILN_62 GBV_ILN_63 GBV_ILN_65 GBV_ILN_69 GBV_ILN_70 GBV_ILN_73 GBV_ILN_95 GBV_ILN_105 GBV_ILN_110 GBV_ILN_151 GBV_ILN_161 GBV_ILN_213 GBV_ILN_230 GBV_ILN_285 GBV_ILN_293 GBV_ILN_602 GBV_ILN_2014 GBV_ILN_4012 GBV_ILN_4037 GBV_ILN_4112 GBV_ILN_4125 GBV_ILN_4126 GBV_ILN_4249 GBV_ILN_4305 GBV_ILN_4306 GBV_ILN_4307 GBV_ILN_4313 GBV_ILN_4322 GBV_ILN_4323 GBV_ILN_4324 GBV_ILN_4325 GBV_ILN_4338 GBV_ILN_4367 GBV_ILN_4700 AR 9 2020 8, p 928
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spellingShingle	Lubna misc QK1-989 misc Oxalidaceae misc chloroplast genome comparison misc inverted repeats misc divergence misc SSRs misc phylogeny misc Botany Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae
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topic_title	QK1-989 Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae Oxalidaceae chloroplast genome comparison inverted repeats divergence SSRs phylogeny
topic	misc QK1-989 misc Oxalidaceae misc chloroplast genome comparison misc inverted repeats misc divergence misc SSRs misc phylogeny misc Botany
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title	Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae
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title_full	Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae
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title_sort	complete chloroplast genome characterization of <i<oxalis corniculata</i< and its comparison with related species from family oxalidaceae
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title_auth	Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae
abstract	<i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. The complete <i<O. corniculata</i< genome sequenced in the present study is a valuable resource for investigating the population and evolutionary genetics of family Oxalidaceae and can be used to identify related species.
abstractGer	<i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. The complete <i<O. corniculata</i< genome sequenced in the present study is a valuable resource for investigating the population and evolutionary genetics of family Oxalidaceae and can be used to identify related species.
abstract_unstemmed	<i<Oxalis corniculata</i< L. (family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. The complete <i<O. corniculata</i< genome sequenced in the present study is a valuable resource for investigating the population and evolutionary genetics of family Oxalidaceae and can be used to identify related species.
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title_short	Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae
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(family Oxalidaceae) is a small creeper wood sorrel plant that grows well in moist climates. Despite being medicinally important, little is known about the genomics of this species. Here, we determined the complete chloroplast genome sequence of <i<O. corniculata</i< for the first time and compared it with other members of family Oxalidaceae. The genome was 152,189 bp in size and comprised of a pair of 25,387 bp inverted repeats (IR) that separated a large 83,427 bp single copy region (LSC) and a small 16,990 bp single copy region (SSC). The chloroplast genome of <i<O. corniculata</i< contains 131 genes with 83 protein coding genes, 40 tRNA genes, and 8 rRNA genes. The analysis revealed 46 microsatellites, of which 6 were present in coding sequences (CDS) regions, 34 in the LSC, 8 in the SSC, and 2 in the single IR region. Twelve palindromic repeats, 30 forward repeats, and 32 tandem repeats were also detected. Chloroplast genome comparisons revealed an overall high degree of sequence similarity between <i<O. corniculata</i< and O. drummondii and some divergence in the intergenic spacers of related species in Oxalidaceae. Furthermore, the seven most divergent genes (<i<ccs</i<A, <i<clp</i<P, <i<rps</i<8, <i<rps</i<15, <i<rpl</i<22, <i<mat</i<K, and <i<ycf</i<1) among genomes were observed. Phylogenomic characterization on the basis of 60 shared genes revealed that <i<O. corniculata</i< is closely related to <i<O. drummondii</i<. 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Complete Chloroplast Genome Characterization of <i<Oxalis Corniculata</i< and Its Comparison with Related Species from Family Oxalidaceae

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